Guide to the Human Genome
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Name: LOC100131830 Sequence: fasta or formatted (220aa) NCBI GI: 169204182
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {219aa} PREDICTED: hypothetical protein
alt prot {219aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         14           2
 C cysteine           10.0         22          14
 D aspartate           0.9          2           1
 E glutamate           2.7          6           2
 F phenylalanine       4.1          9           3
 G glycine             7.7         17           2
 H histidine           1.8          4           1
 I isoleucine          2.7          6           1
 K lysine              2.3          5           1
 L leucine            12.7         28           3
 M methionine          1.8          4           1
 N asparagine          0.9          2           2
 P proline            10.9         24           2
 Q glutamine           2.7          6           1
 R arginine            5.9         13           1
 S serine             15.5         34           3
 T threonine           4.1          9           2
 V valine              3.6          8           1
 W tryptophan          1.4          3           1
 Y tyrosine            1.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131830          0.982   PREDICTED: hypothetical protein 
LOC100131830          0.982   PREDICTED: hypothetical protein 
SLC34A2               0.040   solute carrier family 34 (sodium phosphate), member...
IGSF5                 0.040   immunoglobulin superfamily 5 like 
DNAJC5G               0.038   DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [H...
DNAJC5                0.038   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJC5B               0.034   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
KRTAP5-8              0.034   keratin associated protein 5-8 
KRTAP5-7              0.031   keratin associated protein 5-7 
KRTAP17-1             0.031   keratin associated protein 17-1 
KRTAP5-6              0.031   keratin associated protein 5-6 
KRTAP5-9              0.029   keratin associated protein 5-9 
KRTAP5-4              0.029   keratin associated protein 5-4 
C9orf169              0.029   hypothetical protein LOC375791 
KRTAP5-5              0.029   keratin associated protein 5-5 
CECR6                 0.027   cat eye syndrome chromosome region, candidate 6 isof...
KRTAP5-1              0.027   keratin associated protein 5-1 
KRTAP5-10             0.027   keratin associated protein 5-10 
KRTAP5-11             0.027   keratin associated protein 5-11 
KRTAP5-3              0.025   keratin associated protein 5-3 
TAS1R1                0.025   sweet taste receptor T1r isoform a 
KRTAP4-5              0.025   keratin associated protein 4-5 
LOC100294350          0.022   PREDICTED: similar to hCG2033802 
KRTAP5-2              0.022   keratin associated protein 5-2 
RGS17                 0.022   regulator of G-protein signalling 17 
RGS20                 0.022   regulator of G-protein signaling 20 isoform b 
RGS20                 0.022   regulator of G-protein signaling 20 isoform a 
GPR37L1               0.022   G-protein coupled receptor 37 like 1 
CLCN6                 0.022   chloride channel 6 isoform ClC-6a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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