CLCN6 28448

Name: CLCN6	Sequence: fasta or formatted (869aa)		NCBI GI: 4502873
Description: chloride channel 6 isoform ClC-6a		Referenced in: Chloride Channels
Other entries for this name: alt prot [320aa] chloride channel 6 isoform ClC-6b alt prot [353aa] chloride channel 6 isoform ClC-6c alt prot [308aa] chloride channel 6 isoform ClC-6d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 44 3 C cysteine 2.9 25 4 D aspartate 3.6 31 1 E glutamate 6.0 52 3 F phenylalanine 6.4 56 2 G glycine 7.6 66 2 H histidine 1.8 16 2 I isoleucine 4.7 41 2 K lysine 3.8 33 2 L leucine 11.9 103 2 M methionine 2.9 25 1 N asparagine 3.8 33 2 P proline 4.5 39 1 Q glutamine 3.6 31 2 R arginine 5.3 46 2 S serine 7.7 67 4 T threonine 5.9 51 2 V valine 8.4 73 3 W tryptophan 1.2 10 1 Y tyrosine 3.1 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chloride channel 6 isoform ClC-6a CLCN6 0.363 chloride channel 6 isoform ClC-6c CLCN7 0.291 chloride channel 7 isoform b CLCN7 0.291 chloride channel 7 isoform a CLCN6 0.266 chloride channel 6 isoform ClC-6d CLCN6 0.266 chloride channel 6 isoform ClC-6b CLCN3 0.117 chloride channel 3 isoform e CLCN3 0.117 chloride channel 3 isoform b CLCN5 0.113 chloride channel 5 isoform a CLCN5 0.113 chloride channel 5 isoform a CLCN5 0.113 chloride channel 5 isoform b CLCN4 0.111 chloride channel 4 CLCN2 0.081 chloride channel 2 CLCN1 0.081 chloride channel 1, skeletal muscle CLCNKB 0.056 chloride channel Kb CLCNKA 0.054 chloride channel Ka isoform 1 CLCNKA 0.054 chloride channel Ka isoform 2 RGS20 0.006 regulator of G-protein signaling 20 isoform b RGS20 0.006 regulator of G-protein signaling 20 isoform a LOC100131830 0.006 PREDICTED: hypothetical protein LOC100131830 0.006 PREDICTED: hypothetical protein LOC100131830 0.006 PREDICTED: hypothetical protein CBS 0.005 cystathionine-beta-synthase LOC100129126 0.004 PREDICTED: hypothetical LOC100129126 LOC100129126 0.004 PREDICTED: hypothetical LOC100129126 LOC100129126 0.004 PREDICTED: hypothetical LOC100129126 LOC100129126 0.004 PREDICTED: hypothetical LOC100129126 SNX25 0.004 sorting nexin 25 DNAJC5 0.003 DnaJ (Hsp40) homolog, subfamily C, member 5 DNAJC5B 0.003 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.