Search of human proteins with 169203873

Search of human proteins with 169203873

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo
sapiens]
         (266 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens]          551   e-157
gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens]          551   e-157
gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo sapi...   551   e-157
gi|27734799 REST corepressor 2 [Homo sapiens]                         214   6e-56
gi|209977084 REST corepressor 3 isoform c [Homo sapiens]              124   1e-28
gi|209977080 REST corepressor 3 isoform a [Homo sapiens]              124   1e-28
gi|8922733 REST corepressor 3 isoform d [Homo sapiens]                124   1e-28
gi|209977082 REST corepressor 3 isoform b [Homo sapiens]              122   2e-28
gi|7661892 REST corepressor 1 [Homo sapiens]                          116   2e-26
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    44   1e-04
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    44   1e-04
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]    39   0.004
gi|14141170 metastasis-associated protein 2 [Homo sapiens]             39   0.006
gi|15812226 transcriptional regulating factor 1 [Homo sapiens]         35   0.089
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]                  35   0.089
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             34   0.15 
gi|222144283 hypothetical protein LOC65998 [Homo sapiens]              30   1.7  
gi|46409306 family with sequence similarity 43, member B [Homo s...    30   1.7  
gi|153791628 MCF.2 cell line derived transforming sequence isofo...    30   1.7  
gi|153791325 MCF.2 cell line derived transforming sequence isofo...    30   1.7  
gi|116008440 hypothetical protein LOC222166 [Homo sapiens]             30   1.7  
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    30   2.2  
gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]                 29   4.9  
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             29   4.9  
gi|41872577 raft-linking protein [Homo sapiens]                        29   4.9  
gi|116284392 mucin 2 precursor [Homo sapiens]                          28   6.4  
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          28   6.4  
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          28   6.4  
gi|239756916 PREDICTED: hypothetical protein [Homo sapiens]            28   8.3  
gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo ...    28   8.3  

>gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens]
          Length = 266

 Score =  551 bits (1420), Expect = e-157
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60
           MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI
Sbjct: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60

Query: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120
           EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR
Sbjct: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120

Query: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180
           RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK
Sbjct: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180

Query: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240
           TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ
Sbjct: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240

Query: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266
           ITSISMSVSRSVPPCTTPVPPPTSLP
Sbjct: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266


>gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens]
          Length = 266

 Score =  551 bits (1420), Expect = e-157
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60
           MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI
Sbjct: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60

Query: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120
           EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR
Sbjct: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120

Query: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180
           RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK
Sbjct: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180

Query: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240
           TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ
Sbjct: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240

Query: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266
           ITSISMSVSRSVPPCTTPVPPPTSLP
Sbjct: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266


>gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo
           sapiens]
          Length = 266

 Score =  551 bits (1420), Expect = e-157
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60
           MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI
Sbjct: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60

Query: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120
           EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR
Sbjct: 61  EQTLGVDSRGQGAVGTGLWLPRQVWIQQTLPDKLISSLVKYHYSWKKTHSRTSMTDRQAR 120

Query: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180
           RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK
Sbjct: 121 RLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNK 180

Query: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240
           TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ
Sbjct: 181 TLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQ 240

Query: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266
           ITSISMSVSRSVPPCTTPVPPPTSLP
Sbjct: 241 ITSISMSVSRSVPPCTTPVPPPTSLP 266


>gi|27734799 REST corepressor 2 [Homo sapiens]
          Length = 523

 Score =  214 bits (545), Expect = 6e-56
 Identities = 117/181 (64%), Positives = 127/181 (70%), Gaps = 27/181 (14%)

Query: 1   MVRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60
           M+RVGTNYQA+IPECKPES ARYSNK+LKG+LVWSPNHCVSDAKLDKYI MA EKHGYNI
Sbjct: 45  MIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKEKHGYNI 104

Query: 61  EQTLGVDSRGQGAVGTGL------------W------LPRQVW---------IQQTLPDK 93
           EQ LG+    +  V   L            W      L  Q +         IQQ LPDK
Sbjct: 105 EQALGMLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFGFHGKCFQRIQQMLPDK 164

Query: 94  LISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKR 153
           LI SLVKY+YSWKKT SRTS+ DRQARRL G KDKEDSDE EE RGG+SEGEPD   PKR
Sbjct: 165 LIPSLVKYYYSWKKTRSRTSVMDRQARRLGGRKDKEDSDELEEGRGGVSEGEPDPADPKR 224

Query: 154 E 154
           E
Sbjct: 225 E 225



 Score =  157 bits (397), Expect = 9e-39
 Identities = 81/97 (83%), Positives = 83/97 (85%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPL 228
           DFGAIAEVIGNKTLTQVKTFFVSY   FNLEEVLQEWEAEQDGA GA VP+EEARRGAPL
Sbjct: 350 DFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDGAPGAPVPMEEARRGAPL 409

Query: 229 LAPAQEEDHEVQITSISMSVSRSVPPCTTPVPPPTSL 265
            APA EED EVQITS+S SV RSVPP   P PPPTSL
Sbjct: 410 PAPALEEDDEVQITSVSTSVPRSVPPAPPPPPPPTSL 446


>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
          Length = 449

 Score =  124 bits (310), Expect = 1e-28
 Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
           +RVG  YQA IPE  P +  +Y++K   G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 59  MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 117

Query: 62  QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
           Q LG+    +  +   L  LP        W                     IQQ LPDK 
Sbjct: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177

Query: 95  ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
           I+SLVKY+YSWKKT SRTS+ DRQAR+L    ++ DSD+  E    +   + D   PK+E
Sbjct: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236



 Score = 68.2 bits (165), Expect = 7e-12
 Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
           DF AIA+VIGNKT+ QVK FFV+Y   FNLEEVLQEWEAEQ    + G    + E  + A
Sbjct: 366 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 425

Query: 227 PLLAPAQEEDHEVQI 241
             +   +  D E ++
Sbjct: 426 SNVPSGKSTDEEEEV 440


>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
          Length = 553

 Score =  124 bits (310), Expect = 1e-28
 Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
           +RVG  YQA IPE  P +  +Y++K   G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 59  MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 117

Query: 62  QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
           Q LG+    +  +   L  LP        W                     IQQ LPDK 
Sbjct: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177

Query: 95  ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
           I+SLVKY+YSWKKT SRTS+ DRQAR+L    ++ DSD+  E    +   + D   PK+E
Sbjct: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 5/100 (5%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
           DF AIA+VIGNKT+ QVK FFV+Y   FNLEEVLQEWEAEQ    + G    + E  + A
Sbjct: 366 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 425

Query: 227 PLL--APAQEEDHEVQITSISMSVSRSVPPCTTPVPPPTS 264
             +    + +E+ E Q      ++  S PP  +  P PT+
Sbjct: 426 SNVPSGKSTDEEEEAQTPQAPRTLGPS-PPAPSSTPTPTA 464


>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
          Length = 495

 Score =  124 bits (310), Expect = 1e-28
 Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
           +RVG  YQA IPE  P +  +Y++K   G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 1   MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 59

Query: 62  QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
           Q LG+    +  +   L  LP        W                     IQQ LPDK 
Sbjct: 60  QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 119

Query: 95  ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
           I+SLVKY+YSWKKT SRTS+ DRQAR+L    ++ DSD+  E    +   + D   PK+E
Sbjct: 120 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 178



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 5/100 (5%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
           DF AIA+VIGNKT+ QVK FFV+Y   FNLEEVLQEWEAEQ    + G    + E  + A
Sbjct: 308 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 367

Query: 227 PLL--APAQEEDHEVQITSISMSVSRSVPPCTTPVPPPTS 264
             +    + +E+ E Q      ++  S PP  +  P PT+
Sbjct: 368 SNVPSGKSTDEEEEAQTPQAPRTLGPS-PPAPSSTPTPTA 406


>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
          Length = 436

 Score =  122 bits (307), Expect = 2e-28
 Identities = 77/180 (42%), Positives = 101/180 (56%), Gaps = 29/180 (16%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
           +RVG  YQA IPE  P +  +Y++K   G+LVWSP H + DA+LD+YI +A EKHGYN+E
Sbjct: 59  MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDARLDEYIAIAKEKHGYNVE 117

Query: 62  QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
           Q LG+    +  +   L  LP        W                     IQQ LPDK 
Sbjct: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177

Query: 95  ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
           I+SLVKY+YSWKKT SRTS+ DRQAR+L    ++ DSD+  E    +   + D   PK+E
Sbjct: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236


>gi|7661892 REST corepressor 1 [Homo sapiens]
          Length = 482

 Score =  116 bits (290), Expect = 2e-26
 Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 31/167 (18%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLK-GVLVWSPNHCVSDAKLDKYIVMATEKHGYNI 60
           +RVG  YQA++P+  P  LAR S ++   G+LVWSPN  +S+AKLD+YI +A EKHGYN+
Sbjct: 102 MRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNM 161

Query: 61  EQTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDK 93
           EQ LG+    +  +   L  LP        W                     IQQ LPDK
Sbjct: 162 EQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDK 221

Query: 94  LISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDS-DEFEESRG 139
            I+SLVK++YSWKKT ++TS+ DR AR+ +  +++E+S DE EE+ G
Sbjct: 222 SIASLVKFYYSWKKTRTKTSVMDRHARKQK--REREESEDELEEANG 266



 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 27/40 (67%), Positives = 34/40 (85%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAE 208
           DF AI++VIGNK++ QVK FFV+Y   FN++EVLQEWEAE
Sbjct: 401 DFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAE 440


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPL 228
           ++ AIA ++G+KT++Q K F+ +Y    NL+E+LQ+ + + +  R A    ++A   A  
Sbjct: 633 NWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASE 692

Query: 229 LA--PAQEEDHEVQITSIS 245
            A  P   ED E++ + +S
Sbjct: 693 EAAFPPVVEDEEMEASGVS 711


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPL 228
           ++ AIA ++G+KT++Q K F+ +Y    NL+E+LQ+ + + +  R A    ++A   A  
Sbjct: 633 NWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASE 692

Query: 229 LA--PAQEEDHEVQITSIS 245
            A  P   ED E++ + +S
Sbjct: 693 EAAFPPVVEDEEMEASGVS 711


>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
          Length = 515

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMA 52
           +RVG  YQA IPE   E  +    +    V VW PN  ++D ++D+++V+A
Sbjct: 150 IRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVA 200



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 87  QQTLPDKLISSLVKYHYSWKKT 108
           Q  LP K ++S+++Y+Y WK T
Sbjct: 295 QDFLPWKSLTSIIEYYYMWKTT 316


>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
          Length = 668

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 17/51 (33%), Positives = 33/51 (64%)

Query: 2   VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMA 52
           +RVG  YQA IP+   E  +   N++   + VW P++ ++D ++D+++V+A
Sbjct: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVA 197


>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
          Length = 1200

 Score = 34.7 bits (78), Expect = 0.089
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 84  VWIQQTLPDKLISSLVKYHYSWKKTH--SRTSMTDRQARRLRGCKDKEDSDEFEESRGGL 141
           +++Q+ +  K ++  V+Y+Y+WKK     R   T R A  +  C   E+ +E EE     
Sbjct: 910 IFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRT-RLAEIIDDCVTSEEEEELEEEEE-- 966

Query: 142 SEGEPDAGHPKRERS 156
            + E D    K E S
Sbjct: 967 EDPEEDRKSTKEEES 981


>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
          Length = 1726

 Score = 34.7 bits (78), Expect = 0.089
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 116 DRQARRLRGCKDKEDSDEFEESRGGLS-EGEPDAGHPKRERSSF 158
           D Q        D +D DE EE  G  S + E D GH KR+R+SF
Sbjct: 49  DEQGNLKGFINDDDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSF 92


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 18/70 (25%), Positives = 36/70 (51%)

Query: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQDGARGATVPVEEARRGAPL 228
           ++ AIA+++G K+  Q K F+ +Y    NL+ +LQ+ + +          V +    A  
Sbjct: 646 NWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTSRKPREERDVSQCESVAST 705

Query: 229 LAPAQEEDHE 238
           ++  ++ED E
Sbjct: 706 VSAQEDEDIE 715


>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
          Length = 678

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 203 QEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQITSISMSVSRSVPPCTTPVPPP 262
           +E E E++      VP+     GAPL  PA+EE+ E +       ++   PP   P PPP
Sbjct: 517 EEEEPEEEEEEWGDVPLSP---GAPLERPAEEEEDE-EDGQEPGGLALPPPPPPPPPPPP 572

Query: 263 TS 264
            S
Sbjct: 573 RS 574


>gi|46409306 family with sequence similarity 43, member B [Homo
           sapiens]
          Length = 329

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 17/66 (25%)

Query: 218 PVEEARRGAPLLAPAQEEDHEVQITSIS--------------MSVSRSVPPCT---TPVP 260
           P  E  RGAP L+  QEED E +                   +S++R +  C+    P P
Sbjct: 249 PPSERSRGAPRLSSIQEEDEEEEEDDAEEQEGGVPQRERPEVLSLARELRTCSLRGAPAP 308

Query: 261 PPTSLP 266
           PP + P
Sbjct: 309 PPPAQP 314


>gi|153791628 MCF.2 cell line derived transforming sequence isoform
           a [Homo sapiens]
          Length = 985

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 179 NKTLTQV---KTFFVSYW--HCFNLEEVLQEWEAEQD 210
           NK LTQV   +T F  +W  H   +E+ LQ W+ EQD
Sbjct: 250 NKLLTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEQD 286


>gi|153791325 MCF.2 cell line derived transforming sequence isoform
           b [Homo sapiens]
          Length = 925

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 179 NKTLTQV---KTFFVSYW--HCFNLEEVLQEWEAEQD 210
           NK LTQV   +T F  +W  H   +E+ LQ W+ EQD
Sbjct: 190 NKLLTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEQD 226


>gi|116008440 hypothetical protein LOC222166 [Homo sapiens]
          Length = 131

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 106 KKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPK 152
           K  H       +  R L G  D +D D FEE    + E EP+A HP+
Sbjct: 80  KTLHEVLEKVFKSFRPLLGLPDADD-DAFEEYSADVEEEEPEADHPQ 125


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 93  KLISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRG 139
           +LI  ++K  Y WK+ H R +  +R  +    C     S+E +E RG
Sbjct: 212 ELIQDVLKQGYLWKRGHLRRNWAERWFQLQPSCLCYFGSEECKEKRG 258


>gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]
          Length = 1158

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 198  LEEVLQEWEAEQDGARGATVPVEEARRGAPLLAPAQEEDHEVQITSISMSVSRSVPPCTT 257
            L+E LQ       G R     +  A R  P +   Q   H     S+ +S      P T 
Sbjct: 1054 LQEALQA-----AGTRAGRAALAAAARRPPEVV--QAHGHPRHWNSLPLSHQLDPSPATP 1106

Query: 258  PVPPPTSL 265
            P PPPTSL
Sbjct: 1107 PPPPPTSL 1114


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 36/148 (24%), Positives = 47/148 (31%), Gaps = 25/148 (16%)

Query: 140 GLSEGEPDAGHPKRERSSFWLPKPSGGMADFGAIAEVIGNKTLTQVKTFFVSYWHCFNLE 199
           G S   P AG      + FW  +PSG   D  A+A      T   V   F  +W      
Sbjct: 398 GASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAAT---VYPTFPMFWPAAGSL 454

Query: 200 EVLQEWEAEQDGARGATVPVEEARRGAPLLA------------PAQEEDHEVQITSISM- 246
            V   + A Q  A+     V  A   A   A            PA+E     +    S  
Sbjct: 455 PV-PSYPAAQSQAKAVAAAVAAAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEERCPSAL 513

Query: 247 --------SVSRSVPPCTTPVPPPTSLP 266
                       ++PP   P+PPP   P
Sbjct: 514 SRGPLDEDGTDEALPPPLAPLPPPPPPP 541


>gi|41872577 raft-linking protein [Homo sapiens]
          Length = 578

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)

Query: 66  VDSRGQGAVGTGLWLPRQVWIQQT-LPDKLISSLVKYHYSWKKTHSRTSMTDRQARRLRG 124
           V +  +G+V T     + V++Q+  LP K+     K+ + +    SR  M +RQ R+ +G
Sbjct: 413 VKTTSEGSVST----KQIVFLQRPCLPQKIKKKESKFQWRF----SREEMHNRQMRKSKG 464

Query: 125 CKDKEDSDEFEESRGGLSEGEPDAG 149
                D  + EE+   L +    AG
Sbjct: 465 KLSARDKQQAEENEKNLEDQSSKAG 489


>gi|116284392 mucin 2 precursor [Homo sapiens]
          Length = 5179

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 242  TSISMSVSRSVPPCTTPVPPPTSLP 266
            T++  + + S PP TT  PPPT+ P
Sbjct: 1554 TTLPPTTTPSPPPTTTTTPPPTTTP 1578



 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 242  TSISMSVSRSVPPCTTPVPPPTSLP 266
            T++  + + S PP TT  PPPT+ P
Sbjct: 1633 TTLPPTTTPSPPPTTTTTPPPTTTP 1657


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 87  QQTLPDKLISSLVKYHYSWKKT-HSRTSMTDRQARR 121
           ++ LP+K    L+ ++Y WKKT  + +S   R+ RR
Sbjct: 420 KELLPNKETGELITFYYYWKKTPEAASSRAHRRHRR 455


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 87  QQTLPDKLISSLVKYHYSWKKT-HSRTSMTDRQARR 121
           ++ LP+K    L+ ++Y WKKT  + +S   R+ RR
Sbjct: 420 KELLPNKETGELITFYYYWKKTPEAASSRAHRRHRR 455


>gi|239756916 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 123 RGCKDKEDS----DEFEE-SRGGLSEGEPDAGHPKRERSSFWLPKP 163
           R C+  EDS     +F      G S G     HP+RE+ + WLP P
Sbjct: 5   RFCQPPEDSVRITPQFSSLGLSGWSVGRAGRQHPRREKLTPWLPGP 50


>gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo
           sapiens]
          Length = 490

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 123 RGCKDKEDS----DEFEE-SRGGLSEGEPDAGHPKRERSSFWLPKP 163
           R C+  EDS     +F      G S G     HP+RE+ + WLP P
Sbjct: 5   RFCQPPEDSVRITPQFSSLGLSGWSVGRAGRQHPRREKLTPWLPGP 50


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,770,358
Number of Sequences: 37866
Number of extensions: 553798
Number of successful extensions: 2007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1921
Number of HSP's gapped (non-prelim): 98
length of query: 266
length of database: 18,247,518
effective HSP length: 100
effective length of query: 166
effective length of database: 14,460,918
effective search space: 2400512388
effective search space used: 2400512388
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.