Search of human proteins with 169184027

Search of human proteins with 169184027

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169184027 PREDICTED: similar to high mobility group box 3
[Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   433   e-122
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   431   e-121
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   431   e-121
gi|71143137 high-mobility group box 3 [Homo sapiens]                  361   e-100
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   320   5e-88
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   320   5e-88
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          304   4e-83
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          304   4e-83
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   304   4e-83
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   303   7e-83
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   303   7e-83
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   303   7e-83
gi|4504425 high-mobility group box 1 [Homo sapiens]                   283   7e-77
gi|194688135 high-mobility group box 2 [Homo sapiens]                 275   2e-74
gi|194688133 high-mobility group box 2 [Homo sapiens]                 275   2e-74
gi|11321591 high-mobility group box 2 [Homo sapiens]                  275   2e-74
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           268   2e-72
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   248   3e-66
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            217   6e-57
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          212   2e-55
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          212   2e-55
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          209   1e-54
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        125   2e-29
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          123   1e-28
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          123   1e-28
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          108   3e-24
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     80   9e-16
gi|57232748 HMG2 like isoform 2 [Homo sapiens]                         75   4e-14
gi|8922633 high-mobility group 20A [Homo sapiens]                      66   2e-11
gi|149408144 TOX high mobility group box family member 2 isoform...    65   3e-11

>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  433 bits (1114), Expect = e-122
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
           GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208
           EEDEEDEEEEEKEKDEEDEQRNCLSVSL
Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  431 bits (1107), Expect = e-121
 Identities = 207/208 (99%), Positives = 207/208 (99%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEV VNFAEFSKKCSGRWKTMSSKEKFKF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
           GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208
           EEDEEDEEEEEKEKDEEDEQRNCLSVSL
Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  431 bits (1107), Expect = e-121
 Identities = 207/208 (99%), Positives = 207/208 (99%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEV VNFAEFSKKCSGRWKTMSSKEKFKF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
           GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208
           EEDEEDEEEEEKEKDEEDEQRNCLSVSL
Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  361 bits (926), Expect = e-100
 Identities = 178/200 (89%), Positives = 186/200 (93%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNPEV VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119
            EMAKAD+V YDREMKDYGPAKGGKKK DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120

Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179
           GDVAKKLGEMWNNLNDSEKQPY+TKAAKLKEKYEKDV D K KGKF GAK PAKVARKKV
Sbjct: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180

Query: 180 EEEDEEDEEEEEKEKDEEDE 199
           EEEDEE+EEEEE+E++EEDE
Sbjct: 181 EEEDEEEEEEEEEEEEEEDE 200


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  320 bits (820), Expect = 5e-88
 Identities = 155/187 (82%), Positives = 168/187 (89%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+V +NFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
            E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV   K KGK  GAK PAKVA+KKVE
Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180

Query: 181 EEDEEDE 187
           EEDE++E
Sbjct: 181 EEDEDEE 187


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  320 bits (820), Expect = 5e-88
 Identities = 155/187 (82%), Positives = 168/187 (89%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+V +NFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
            E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV   K KGK  GAK PAKVA+KKVE
Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180

Query: 181 EEDEEDE 187
           EEDE++E
Sbjct: 181 EEDEDEE 187


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  304 bits (778), Expect = 4e-83
 Identities = 149/199 (74%), Positives = 169/199 (84%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MA+GD KKP+GKMSAYAF  QTC +EHKKKNPEV VNF EFSKKCS + KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
            EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF  AK P K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEEDEEEEEKEKDEEDE 199
           E+D+EDEEEEE+E+++++E
Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  304 bits (778), Expect = 4e-83
 Identities = 149/199 (74%), Positives = 169/199 (84%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MA+GD KKP+GKMSAYAF  QTC +EHKKKNPEV VNF EFSKKCS + KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
            EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF  AK P K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEEDEEEEEKEKDEEDE 199
           E+D+EDEEEEE+E+++++E
Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  304 bits (778), Expect = 4e-83
 Identities = 149/199 (74%), Positives = 169/199 (84%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MA+GD KKP+GKMSAYAF  QTC +EHKKKNPEV VNF EFSKKCS + KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120
            EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180
           D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF  AK P K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEEDEEEEEKEKDEEDE 199
           E+D+EDEEEEE+E+++++E
Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  303 bits (776), Expect = 7e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEEDEE 188
           EEEDE++EE
Sbjct: 176 EEEDEDEEE 184


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  303 bits (776), Expect = 7e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEEDEE 188
           EEEDE++EE
Sbjct: 176 EEEDEDEEE 184


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  303 bits (776), Expect = 7e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEEDEE 188
           EEEDE++EE
Sbjct: 176 EEEDEDEEE 184


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  283 bits (724), Expect = 7e-77
 Identities = 142/206 (68%), Positives = 163/206 (79%), Gaps = 7/206 (3%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M KGDPKKP+GKMS+YAF VQTC +EHKKK+P+  VNF+EFSKKCS RWKTMS+KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117
            +MAKAD+  Y+REMK Y P KG  KK   DPNAPKRPPS FFLFCSE+RPKIK  +PG+
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAK----RPAK 173
           SIGDVAKKLGEMWNN    +KQPY  KAAKLKEKYEKD+   + KGK   AK    +  K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 174 VARKKVEEEDEEDEEEEEKEKDEEDE 199
             +KK EEEDEEDEE+EE+E+DEEDE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDE 206


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  275 bits (703), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  275 bits (703), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  275 bits (703), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  268 bits (685), Expect = 2e-72
 Identities = 133/206 (64%), Positives = 162/206 (78%), Gaps = 6/206 (2%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M KGDPKKP+GKMS+YAF VQTC +EHKKK+ +  VNF+EFS KCS RWKTMS+KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 61  GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117
            +MAKAD+  Y+R+MK Y P KG  KK   DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKR---PAKV 174
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+   + KGK   AK+    A+ 
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200
           ++KK EEE++E++EE+E+E+DEEDE+
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEDEEDEE 206


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  248 bits (633), Expect = 3e-66
 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)

Query: 40  EFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSG 98
           EFSKKCS RWKTMS KEK KF EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSG
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76

Query: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D
Sbjct: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136

Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEE 188
            K KGKF G+KRPAKVA KKVEEEDE++EE
Sbjct: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  217 bits (552), Expect = 6e-57
 Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 4/182 (2%)

Query: 24  CKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKG 83
           C+EHKKKNP+  V F+EF KKCS  WKT+ +KEK KF +MAKAD+  Y+REMK Y P KG
Sbjct: 698 CEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKG 757

Query: 84  GKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 140
            KKK   DPNAPKRPP  FFLFCSE+RPKIK  +PG+SI DV KKL  MWNN   ++KQ 
Sbjct: 758 EKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQF 817

Query: 141 YVTKAAKLKEKYEKDVVDCKLKGKFYGAK-RPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
           Y  KAAKLKEKY+KD+   + KGK   AK R  K  + K ++E+EEDEE+E++E++EED+
Sbjct: 818 YEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDD 877

Query: 200 QR 201
            +
Sbjct: 878 DK 879


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  212 bits (539), Expect = 2e-55
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%)

Query: 34  VLVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDEEDE
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342



 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/75 (21%), Positives = 27/75 (36%)

Query: 92  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 152 YEKDVVDCKLKGKFY 166
            + D    K + K Y
Sbjct: 200 AKADKAHYKREMKTY 214


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  212 bits (539), Expect = 2e-55
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%)

Query: 34  VLVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDEEDE
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342



 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/75 (21%), Positives = 27/75 (36%)

Query: 92  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 152 YEKDVVDCKLKGKFY 166
            + D    K + K Y
Sbjct: 200 AKADKAHYKREMKTY 214


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  209 bits (532), Expect = 1e-54
 Identities = 109/183 (59%), Positives = 131/183 (71%), Gaps = 14/183 (7%)

Query: 34  VLVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDE+++
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDED 342

Query: 200 QRN 202
           + +
Sbjct: 343 EED 345



 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/75 (21%), Positives = 27/75 (36%)

Query: 92  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 152 YEKDVVDCKLKGKFY 166
            + D    K + K Y
Sbjct: 200 AKADKAHYKREMKTY 214


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  125 bits (315), Expect = 2e-29
 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60
           M K    KP+  +S+Y   +     + K++ P   V F EFS+KCS +W+++S  EK K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 61  GEMAKADEVCYDREMKDY-GPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119
             +AK D+  Y  EM +Y G  K  +K+DP  P+RPPS F LFC +   ++K  NP  S+
Sbjct: 61  EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120

Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDV 156
             VAK  G+MW+   D EK PY  + A L+ KY +++
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEEL 157



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 92  PKRPPSGFFLFCSEFRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYVTKAAKLK 149
           PK   S +  F   +R K K   P   +G  + ++K  E W +++  EK  Y   A   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 150 EKYEKDVVDCKLKGKFYGAKRPAKVAR 176
            +Y++++++   K K    + P +  R
Sbjct: 69  ARYQEEMMNYVGKRKKRRKRDPQEPRR 95


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  123 bits (308), Expect = 1e-28
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 42  SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98
           S + S +    +S+   +  +  K D   Y+REMK Y P K   K   +DPNAPK PP  
Sbjct: 11  STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70

Query: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158
           FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+  
Sbjct: 71  FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129

Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194
              KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  123 bits (308), Expect = 1e-28
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 42  SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98
           S + S +    +S+   +  +  K D   Y+REMK Y P K   K   +DPNAPK PP  
Sbjct: 11  STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70

Query: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158
           FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+  
Sbjct: 71  FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129

Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194
              KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  108 bits (270), Expect = 3e-24
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 85  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 144
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142

Query: 145 AAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194
           A KLKEKYEKD+     KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 191


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 3/133 (2%)

Query: 53  SSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKS 112
           S +++ K  ++ KA ++  DR+ +   P +  K KDPNAPKRP S + L+ +  R KIKS
Sbjct: 510 SDRDEKKRKQLKKA-KMAKDRKSRKK-PVEVKKGKDPNAPKRPMSAYMLWLNASREKIKS 567

Query: 113 TNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPA 172
            +PGISI D++KK GE+W  ++  +K+ +  KA   +  YEK + + +  G+   +KR  
Sbjct: 568 DHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE-GGRGESSKRDK 626

Query: 173 KVARKKVEEEDEE 185
              +KKV+ + E+
Sbjct: 627 SKKKKKVKVKMEK 639



 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 5   DPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGEMA 64
           DP  P+  MSAY   +    ++ K  +P + +   + SKK    WK MS ++K ++   A
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISIT--DLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 65  KADEVCYDREMKDYGPAKGGKKKDPNAPKR 94
           +     Y++ MK+Y   +G   K   + K+
Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKK 630


>gi|57232748 HMG2 like isoform 2 [Homo sapiens]
          Length = 112

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 34/82 (41%), Positives = 48/82 (58%)

Query: 75  MKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLN 134
           M   G  K  +K+DP  P+RPPS F LFC +   ++K  NP  S+  VAK  G+MW+   
Sbjct: 2   MNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTAT 61

Query: 135 DSEKQPYVTKAAKLKEKYEKDV 156
           D EK PY  + A L+ KY +++
Sbjct: 62  DLEKHPYEQRVALLRAKYFEEL 83



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 3  KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
          K DP++P+   S++    Q    + K++NP   V   + +K     W T +  EK  + +
Sbjct: 13 KRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV--VQVAKATGKMWSTATDLEKHPYEQ 70

Query: 63 MAKADEVCYDREMKDYGPAKGGKKK 87
                  Y  E++ Y      +KK
Sbjct: 71 RVALLRAKYFEELELYRKQCNARKK 95


>gi|8922633 high-mobility group 20A [Homo sapiens]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 72  DREMKDYGPAKGGKKKDP----NAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLG 127
           ++  K  G +KG K+K P    NAPK P +G+  F +E R ++++  P +   ++ + LG
Sbjct: 79  EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138

Query: 128 EMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARK-KVEEEDEED 186
             W+ L   EKQ Y+ +A + KE+Y K++   +    +    R  +  +K K   +D   
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQDAAR 198

Query: 187 EEEEEKEKDEEDEQRNCLSVSL 208
           +   + EK+ E ++R+   + +
Sbjct: 199 QATHDHEKETEVKERSVFDIPI 220



 Score = 32.3 bits (72), Expect = 0.29
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 5   DPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGEMA 64
           D   P+  ++ Y   +    ++ + K PEV   F E ++     W  +  +EK ++ + A
Sbjct: 99  DSNAPKSPLTGYVRFMNERREQLRAKRPEV--PFPEITRMLGNEWSKLPPEEKQRYLDEA 156

Query: 65  KADEVCYDREMKDY 78
             D+  Y +E++ Y
Sbjct: 157 DRDKERYMKELEQY 170


>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295

Query: 142 VTKAAKLKEKYEK 154
             K    K++Y K
Sbjct: 296 KRKTEAAKKEYLK 308



 Score = 34.3 bits (77), Expect = 0.077
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297

Query: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357

Query: 108 PK-IKSTNPGISIGDVAKKLG 127
           P  +++   G S   +A+ LG
Sbjct: 358 PSDLQAFRSGASPASLARTLG 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,580,910
Number of Sequences: 37866
Number of extensions: 493037
Number of successful extensions: 20474
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 7091
Number of HSP's gapped (non-prelim): 7608
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.