Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169183882
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169183882 PREDICTED: hypothetical protein [Homo sapiens] 641 0.0
gi|169179759 PREDICTED: hypothetical protein [Homo sapiens] 588 e-168
gi|169180158 PREDICTED: hypothetical protein [Homo sapiens] 587 e-168
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 45 1e-04
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 44 2e-04
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 42 6e-04
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 41 0.001
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 41 0.001
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.002
gi|239742249 PREDICTED: hypothetical protein XP_002342465 [Homo ... 40 0.003
gi|19924099 synapsin I isoform Ia [Homo sapiens] 40 0.003
gi|19924097 synapsin I isoform Ib [Homo sapiens] 40 0.003
gi|150170670 piccolo isoform 2 [Homo sapiens] 39 0.004
gi|150378539 piccolo isoform 1 [Homo sapiens] 39 0.004
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 39 0.005
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 39 0.005
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 39 0.007
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 39 0.007
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.007
gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo sap... 39 0.007
gi|122939151 Rho GTPase activating protein 9 isoform 2 [Homo sap... 39 0.007
gi|238550198 synaptotagmin III [Homo sapiens] 38 0.012
gi|238550196 synaptotagmin III [Homo sapiens] 38 0.012
gi|14150054 synaptotagmin III [Homo sapiens] 38 0.012
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 38 0.012
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 38 0.012
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 38 0.012
gi|115511036 alpha-kinase 3 [Homo sapiens] 38 0.012
>gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 641 bits (1653), Expect = 0.0
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS 60
MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS
Sbjct: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS 60
Query: 61 ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQ 120
ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQ
Sbjct: 61 ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQ 120
Query: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180
IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL
Sbjct: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180
Query: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCST 240
QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCST
Sbjct: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCST 240
Query: 241 VGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295
VGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG
Sbjct: 241 VGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295
>gi|169179759 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 588 bits (1517), Expect = e-168
Identities = 280/307 (91%), Positives = 280/307 (91%), Gaps = 24/307 (7%)
Query: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS 60
MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHR
Sbjct: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHR------ 54
Query: 61 ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP------------PMRGQ 108
APDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP PMRGQ
Sbjct: 55 ------APDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQ 108
Query: 109 CVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168
VW AGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ
Sbjct: 109 SVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168
Query: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC
Sbjct: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
Query: 229 APQPQHQVDCSTVGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288
APQPQHQVDCS VGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD
Sbjct: 229 APQPQHQVDCSAVGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288
Query: 289 RTVSVPG 295
RTVSVPG
Sbjct: 289 RTVSVPG 295
>gi|169180158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 587 bits (1513), Expect = e-168
Identities = 279/307 (90%), Positives = 280/307 (91%), Gaps = 24/307 (7%)
Query: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS 60
MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHR
Sbjct: 1 MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHR------ 54
Query: 61 ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP------------PMRGQ 108
APDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP PMRGQ
Sbjct: 55 ------APDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQ 108
Query: 109 CVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168
VW AGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ
Sbjct: 109 SVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168
Query: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC
Sbjct: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
Query: 229 APQPQHQVDCSTVGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288
APQPQHQVDCS VGGP+AAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD
Sbjct: 229 APQPQHQVDCSAVGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288
Query: 289 RTVSVPG 295
RTVSVPG
Sbjct: 289 RTVSVPG 295
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 44.7 bits (104), Expect = 1e-04
Identities = 53/198 (26%), Positives = 67/198 (33%), Gaps = 23/198 (11%)
Query: 78 GPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHC 137
GPP +G P G+ GPP +G + PP G+ GPP G
Sbjct: 122 GPPPQGGNQSQGPPPRPGKP---EGPPPQGGNQSQGPPPRPGK---PEGPPPQGGNQSQG 175
Query: 138 PTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQP------HRATSPAAPGLQECPRTGPSQP 191
P H + GP Q GN P P+ P P PG E P +
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNK 235
Query: 192 SMQLPSYP--EEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGE 249
P +P +G G+K RP PPG+ + PQ GP
Sbjct: 236 PQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP----- 290
Query: 250 KPPVSRLGSAH---QGLP 264
PP + G H QG P
Sbjct: 291 -PPPPQGGRPHRPPQGQP 307
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 43.5 bits (101), Expect = 2e-04
Identities = 60/223 (26%), Positives = 75/223 (33%), Gaps = 36/223 (16%)
Query: 1 MGSAAQGPRCGVRVCGAQGP-RCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVP--D 57
MG + R R +Q P + G S WG R VP+A + G P
Sbjct: 179 MGKKVEVKRAEPRDSKSQAPGQPGASQWGSRV-----------VPNAANGWAGQPPPTWQ 227
Query: 58 AGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVW---GAGPPMRGQCVWRAG 114
G G P AG GG GPP G+ P V G PP +G
Sbjct: 228 QGYGPQGMWVP-AGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGA 286
Query: 115 PPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATS 174
PP Q + GPP Q PG P P++ P S
Sbjct: 287 PP---QFSFGYGPPPPPP----------DQFAPPGVP-----PPPATPGAAPLAFPPPPS 328
Query: 175 PAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPP 217
AAP + + P P P Q Y ++ SG +G D PP
Sbjct: 329 QAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPP 371
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 42.0 bits (97), Expect = 6e-04
Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 38/145 (26%)
Query: 142 LSQRRGPGRQCGNSLPEPSSMLTCP----------------QQPHRATSPAAPGLQECP- 184
LSQR P QC + P + CP P + SPA+P CP
Sbjct: 337 LSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASP---SCPS 393
Query: 185 ----RTGPSQPSMQLPSYPEEGSGL--SRGHKDARPGPPGQEREQVL--RACAPQPQHQV 236
R P PS Q PS P+ S + S RP PP E+ L RA A P H V
Sbjct: 394 PVPQRRSPVPPSCQSPS-PQRRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAKPPSHHV 452
Query: 237 DCSTVG---------GPMAAGEKPP 252
G G AG PP
Sbjct: 453 KAGFQGRRSYSELAEGAAYAGASPP 477
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 41.2 bits (95), Expect = 0.001
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 44 PDAGSECVGHRVPDAGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP 103
P AG +G R + G RA G VC G P M+ + G G+G G W GP
Sbjct: 226 PQAGCRAMGQR---RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGG--WQPGP 280
Query: 104 PMRGQCVWRAG--PPMRGQIVWSAGPPRVQGTL 134
+R C+ AG P RG P RV+G++
Sbjct: 281 SVRESCIDMAGRERPSRGA---GQRPQRVRGSV 310
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 41.2 bits (95), Expect = 0.001
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 44 PDAGSECVGHRVPDAGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGP 103
P AG +G R + G RA G VC G P M+ + G G+G G W GP
Sbjct: 226 PQAGCRAMGQR---RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGG--WQPGP 280
Query: 104 PMRGQCVWRAG--PPMRGQIVWSAGPPRVQGTL 134
+R C+ AG P RG P RV+G++
Sbjct: 281 SVRESCIDMAGRERPSRGA---GQRPQRVRGSV 310
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 40.8 bits (94), Expect = 0.001
Identities = 45/170 (26%), Positives = 56/170 (32%), Gaps = 26/170 (15%)
Query: 135 VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ------PHRATSPAAPGLQEC-PRTG 187
+H R + + PG C + P+ P P R SP GL PR
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGP 161
Query: 188 PSQPSMQ-------------LPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQH 234
P QP + P +P + +PGP GQ+ E+ P
Sbjct: 162 PGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGE 221
Query: 235 QVDCSTVGGPMAAGEKPPVSRLGSAHQGLP----TSAFEGACHALGDPGI 280
Q S G P G P LG H GLP G GDPGI
Sbjct: 222 QSQASIQGPPGPPGPPGPSGPLG--HPGLPGPMGPPGLPGPPGPKGDPGI 269
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 138 PTRHLSQRRGP-GRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLP 196
P L+Q RGP G G S P+P P Q + P P Q+ P P QP P
Sbjct: 36 PGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPP---PHQP----P 88
Query: 197 SYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVS 254
+P+ H+ +P PP Q+ + + A P P V + A PP S
Sbjct: 89 PHPQP-------HQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTS 139
>gi|239742249 PREDICTED: hypothetical protein XP_002342465 [Homo
sapiens]
Length = 179
Score = 39.7 bits (91), Expect = 0.003
Identities = 45/167 (26%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 100 GAGPPMRGQCVWRAGPP-MRGQIVWSAGP--------PRVQGTLVHCPTRHLSQRRGPGR 150
G PP+ Q WR G +G VW++ P PR G + + + G
Sbjct: 5 GITPPLEAQQPWRGGVSGSQGLQVWNSNPKCQLCGHQPRNTGLWPNRSSFQTDISKSAGN 64
Query: 151 Q-CGNSLPEPSSMLTCP----QQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGL 205
C + P P Q HR P+ + PR GP+QP +
Sbjct: 65 TGCATAAPAHGGWQWAPLAQGQLSHR---PSGTDRKVAPR-GPTQPPAR----------- 109
Query: 206 SRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPP 252
RG+ P PG R Q + A QH C GGP+ GE P
Sbjct: 110 -RGNHLRPPQSPGASRAQEPKFPASGHQHSPGCPRAGGPL-RGEPGP 154
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 39.7 bits (91), Expect = 0.003
Identities = 51/187 (27%), Positives = 69/187 (36%), Gaps = 25/187 (13%)
Query: 80 PMRGQWGW----GAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLV 135
P RG G GA R S AGPP + + + GPP G GPP Q
Sbjct: 428 PGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP-- 485
Query: 136 HCPTRHLSQRRGPGRQCGNSLPEP-SSMLTCPQQPHRATSPAAPGL--QECPRTG----- 187
P + G G G+ LP+ S + PQQP +P G Q P G
Sbjct: 486 --PPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP 543
Query: 188 -----PSQPSMQLPSYPEEGSGLSRGHKDARP----GPPGQEREQVLRACAPQPQHQVDC 238
P+ PS Q + P + + + A P PPG ++ Q P P
Sbjct: 544 PAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
Query: 239 STVGGPM 245
++ GP+
Sbjct: 604 ASQAGPV 610
Score = 38.1 bits (87), Expect = 0.009
Identities = 56/242 (23%), Positives = 84/242 (34%), Gaps = 41/242 (16%)
Query: 31 APDVGSVGVGRRVPDAGSECVGHRVPD--AGSECVGHRAPDAGSVCGGAGPPMRGQWGWG 88
+P GS G + P G+ +G + AG P G G GP +G
Sbjct: 427 SPGRGSHG---QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQ 483
Query: 89 AGSPMRGQSVWGAGPPMRG--------------QCVWRAGPPMRGQIVWS---AGPPRVQ 131
P Q + G GPP Q +A PP +GQ S AG P
Sbjct: 484 RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP 543
Query: 132 GTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPR------ 185
P P RQ G + ++ P P + +P ++ P
Sbjct: 544 ------PAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGP 597
Query: 186 TGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVD---CSTVG 242
GP++ + Q P G ++ + + PGP G+ + Q+ A +P V + G
Sbjct: 598 AGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQL----AQKPSQDVPPPATAAAG 653
Query: 243 GP 244
GP
Sbjct: 654 GP 655
Score = 36.2 bits (82), Expect = 0.035
Identities = 37/141 (26%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 140 RHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECP--RTGPSQPSMQLPS 197
R + PGR P P ++ P + PA P Q+ P + GP QP P
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGAL---PLGRQTSQQPAGPPAQQRPPPQGGPPQPG---PG 473
Query: 198 YPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRLG 257
+G L + RP P GQ+ L A P Q S P + G
Sbjct: 474 PQRQGPPLQQ-----RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQG 528
Query: 258 SAHQGLPTSAFEGACHALGDP 278
Q P + GA A P
Sbjct: 529 QGRQSRPVAGGPGAPPAARPP 549
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 39.7 bits (91), Expect = 0.003
Identities = 51/187 (27%), Positives = 69/187 (36%), Gaps = 25/187 (13%)
Query: 80 PMRGQWGW----GAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLV 135
P RG G GA R S AGPP + + + GPP G GPP Q
Sbjct: 428 PGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP-- 485
Query: 136 HCPTRHLSQRRGPGRQCGNSLPEP-SSMLTCPQQPHRATSPAAPGL--QECPRTG----- 187
P + G G G+ LP+ S + PQQP +P G Q P G
Sbjct: 486 --PPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP 543
Query: 188 -----PSQPSMQLPSYPEEGSGLSRGHKDARP----GPPGQEREQVLRACAPQPQHQVDC 238
P+ PS Q + P + + + A P PPG ++ Q P P
Sbjct: 544 PAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
Query: 239 STVGGPM 245
++ GP+
Sbjct: 604 ASQAGPV 610
Score = 38.1 bits (87), Expect = 0.009
Identities = 56/242 (23%), Positives = 84/242 (34%), Gaps = 41/242 (16%)
Query: 31 APDVGSVGVGRRVPDAGSECVGHRVPD--AGSECVGHRAPDAGSVCGGAGPPMRGQWGWG 88
+P GS G + P G+ +G + AG P G G GP +G
Sbjct: 427 SPGRGSHG---QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQ 483
Query: 89 AGSPMRGQSVWGAGPPMRG--------------QCVWRAGPPMRGQIVWS---AGPPRVQ 131
P Q + G GPP Q +A PP +GQ S AG P
Sbjct: 484 RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP 543
Query: 132 GTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPR------ 185
P P RQ G + ++ P P + +P ++ P
Sbjct: 544 ------PAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGP 597
Query: 186 TGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVD---CSTVG 242
GP++ + Q P G ++ + + PGP G+ + Q+ A +P V + G
Sbjct: 598 AGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQL----AQKPSQDVPPPATAAAG 653
Query: 243 GP 244
GP
Sbjct: 654 GP 655
Score = 36.2 bits (82), Expect = 0.035
Identities = 37/141 (26%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 140 RHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECP--RTGPSQPSMQLPS 197
R + PGR P P ++ P + PA P Q+ P + GP QP P
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGAL---PLGRQTSQQPAGPPAQQRPPPQGGPPQPG---PG 473
Query: 198 YPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRLG 257
+G L + RP P GQ+ L A P Q S P + G
Sbjct: 474 PQRQGPPLQQ-----RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQG 528
Query: 258 SAHQGLPTSAFEGACHALGDP 278
Q P + GA A P
Sbjct: 529 QGRQSRPVAGGPGAPPAARPP 549
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 39.3 bits (90), Expect = 0.004
Identities = 45/152 (29%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 113 AGPPMRGQI-VWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHR 171
A PP G+ GP + V P + L+Q+ PG Q P P+ T QQP
Sbjct: 392 AQPPGVGKTPAQQPGPAKPPTQQVGTP-KPLAQQ--PGLQSPAKAPGPTK--TPVQQPGP 446
Query: 172 ATSPA---APGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
PA PG +TGP++P QLP P + G P PG + +
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPG-PAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 229 APQPQHQVDCSTVGGPMAAGE-KPPVSRLGSA 259
+ +P Q P G KPP + GSA
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 39.3 bits (90), Expect = 0.004
Identities = 45/152 (29%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 113 AGPPMRGQI-VWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHR 171
A PP G+ GP + V P + L+Q+ PG Q P P+ T QQP
Sbjct: 392 AQPPGVGKTPAQQPGPAKPPTQQVGTP-KPLAQQ--PGLQSPAKAPGPTK--TPVQQPGP 446
Query: 172 ATSPA---APGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
PA PG +TGP++P QLP P + G P PG + +
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPG-PAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 229 APQPQHQVDCSTVGGPMAAGE-KPPVSRLGSA 259
+ +P Q P G KPP + GSA
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 0.005
Identities = 56/217 (25%), Positives = 75/217 (34%), Gaps = 35/217 (16%)
Query: 56 PDAGSECVGHRAPDAGSVCGGAGPPMR-----GQW----------GWGAGSPMRGQSVWG 100
P A G RA G GG G P+R G W G G G ++ S G
Sbjct: 29 PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSGPG 88
Query: 101 AGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPS 160
A PP + R+ R PPR+ + ++ R R+ ++LP P
Sbjct: 89 AAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR---RRSASALPAPR 145
Query: 161 SMLTCPQQPHRATSP---AAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPP 217
CPQ+ S PG PR + L + G G SR A
Sbjct: 146 ---LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVA----- 197
Query: 218 GQEREQVLRACAPQPQHQVDCSTVGG---PMAAGEKP 251
R+ L ACA P+ G + AGE+P
Sbjct: 198 --GRDAAL-ACAQLPRRPRGAGARRGMRRRLGAGERP 231
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 0.005
Identities = 56/217 (25%), Positives = 75/217 (34%), Gaps = 35/217 (16%)
Query: 56 PDAGSECVGHRAPDAGSVCGGAGPPMR-----GQW----------GWGAGSPMRGQSVWG 100
P A G RA G GG G P+R G W G G G ++ S G
Sbjct: 29 PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSGPG 88
Query: 101 AGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPS 160
A PP + R+ R PPR+ + ++ R R+ ++LP P
Sbjct: 89 AAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR---RRSASALPAPR 145
Query: 161 SMLTCPQQPHRATSP---AAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPP 217
CPQ+ S PG PR + L + G G SR A
Sbjct: 146 ---LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVA----- 197
Query: 218 GQEREQVLRACAPQPQHQVDCSTVGG---PMAAGEKP 251
R+ L ACA P+ G + AGE+P
Sbjct: 198 --GRDAAL-ACAQLPRRPRGAGARRGMRRRLGAGERP 231
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 38.9 bits (89), Expect = 0.005
Identities = 43/164 (26%), Positives = 55/164 (33%), Gaps = 26/164 (15%)
Query: 135 VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQEC-PRTGPSQPSM 193
+H R + + PG C + P+ +P SP GL PR P QP
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTG------RPGLPGSPGDAGLSIIGPRGPPGQPGT 155
Query: 194 Q-------------LPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCST 240
+ P +P + +PGP GQ+ E+ P Q S
Sbjct: 156 RGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASI 215
Query: 241 VGGPMAAGEKPPVSRLGSAHQGLP----TSAFEGACHALGDPGI 280
G P G P LG H GLP G GDPGI
Sbjct: 216 QGPPGPPGPPGPSGPLG--HPGLPGPMGPPGLPGPPGPKGDPGI 257
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 38.5 bits (88), Expect = 0.007
Identities = 56/202 (27%), Positives = 76/202 (37%), Gaps = 34/202 (16%)
Query: 35 GSVGVGRRVPDAGSECVGHRVPDAGSECVGHRAPDAG-SVCGGAGPPMR-GQWGWGAGSP 92
GS G GS +G + D GS +GH P G GPP R G G
Sbjct: 1248 GSPGAPGPPGPPGSHVIGIK-GDKGS--MGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPG 1304
Query: 93 MRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQC 152
RG + P ++G+ + P G I GPP G +GP
Sbjct: 1305 PRGDPGFQGFPGVKGE---KGNPGFLGSI----GPPGPIGP------------KGPPGVR 1345
Query: 153 GNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQL-PSYPEEGSGLSRGHKD 211
G+ P +++ P P +P PG+Q P GP P L P P G KD
Sbjct: 1346 GD--PGTLKIISLPGSPGPPGTPGEPGMQGEP--GPPGPPGNLGPCGPRGKPG-----KD 1396
Query: 212 ARPGPPGQEREQVLRACAPQPQ 233
+PG PG E+ + +P+
Sbjct: 1397 GKPGTPGPAGEKGNKGSKGEPE 1418
Score = 35.4 bits (80), Expect = 0.060
Identities = 69/259 (26%), Positives = 86/259 (33%), Gaps = 63/259 (24%)
Query: 67 APDAGSVCGGAGPPMRGQWGWGA-GSP-MRG-QSVWGA-GPP----MRGQCVWRA----- 113
+P + G AGPP G+G G P ++G Q V GA GPP RG+
Sbjct: 603 SPGSPGPAGPAGPP-----GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGP 657
Query: 114 -GPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRG------------PGRQCGNSLPEPS 160
GPP GPP + G+L C L G PG + P
Sbjct: 658 PGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTK 717
Query: 161 SMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYP-------EEGSGLSRGH--KD 211
L CP + P PGL +P++ +P P E G+ G
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLP----GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLP 773
Query: 212 ARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRL---GSAHQGLP---- 264
PG PG + L P G P GE+ P R QGLP
Sbjct: 774 GLPGLPGTPGNEGLDGPRGDP---------GQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 265 ---TSAFEGACHALGDPGI 280
G GDPGI
Sbjct: 825 LKGQQGRRGKTGPKGDPGI 843
Score = 28.5 bits (62), Expect = 7.4
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 20/106 (18%)
Query: 195 LPSYPEEGSGLS-RGH--KDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKP 251
LP +P + RG +D PGP G++ E L P P+ G P A G K
Sbjct: 1141 LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPR--------GNPGAQGAKG 1192
Query: 252 PVSRLGSAHQGLPTSAFEGACHALGDPGIF--TGLEAGDRTVSVPG 295
R GLP G A+GD G TG+E +PG
Sbjct: 1193 --DRGAPGFPGLP-----GRKGAMGDAGPRGPTGIEGFPGPPGLPG 1231
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 38.5 bits (88), Expect = 0.007
Identities = 41/142 (28%), Positives = 48/142 (33%), Gaps = 22/142 (15%)
Query: 157 PEPSSMLTCPQQPHRATSPAAPGLQEC-PRTGPSQPSMQ-------------LPSYPEEG 202
P+ S CP P SP GL PR P QP + P +P
Sbjct: 111 PKTSPGCNCPPAPQG--SPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPK 168
Query: 203 SGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRLGSAHQG 262
+ +PGP GQ+ E+ P Q S G P G P LG H G
Sbjct: 169 GDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLG--HPG 226
Query: 263 LP----TSAFEGACHALGDPGI 280
LP G GDPGI
Sbjct: 227 LPGPMGPPGLPGPPGPKGDPGI 248
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.5 bits (88), Expect = 0.007
Identities = 51/196 (26%), Positives = 63/196 (32%), Gaps = 29/196 (14%)
Query: 67 APDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAG 126
+P G+ G PP G P G G PP + Q GPP +G S
Sbjct: 40 SPQGGNKPQGPPPPPGKPQG---PPPQGGNKPQGPPPPGKPQ-----GPPPQGDK--SRS 89
Query: 127 PPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRT 186
P G P + +Q +GP G P PQ P P P Q
Sbjct: 90 PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSR 149
Query: 187 GPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMA 246
P P + P +G +G P PPG+ + P PQ GG
Sbjct: 150 SPRSPPGKPQGPPPQGGNQPQG----PPPPPGKPQ-------GPPPQ--------GGKKP 190
Query: 247 AGEKPPVSRLGSAHQG 262
G PP G QG
Sbjct: 191 QGPPPPGKPQGPPPQG 206
Score = 35.0 bits (79), Expect = 0.079
Identities = 46/171 (26%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 68 PDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGP 127
P G+ G PP G P G+ G PP + Q GPP +G S+
Sbjct: 163 PQGGNQPQGPPPPPGKPQG---PPPQGGKKPQGPPPPGKPQ-----GPPPQGDKSRSSQS 214
Query: 128 P--RVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECP- 184
P + QG P + +Q +GP G P PQ ++ P PG + P
Sbjct: 215 PPGKPQGP----PPQGGNQPQGPPPPPGKPQGPP------PQGGNKPQGPPPPGKPQGPP 264
Query: 185 -RTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPP-GQEREQVLRACAPQPQ 233
+ G S + P +G G+ P PP G +Q A QPQ
Sbjct: 265 AQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ 315
>gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo
sapiens]
Length = 731
Score = 38.5 bits (88), Expect = 0.007
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Query: 119 GQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAP 178
GQ++W+ GP G+L LSQ Q + P P C +T +P
Sbjct: 99 GQLLWTPGPKLFHGSL-----EELSQALPSRAQASSEQPPPLPRKMCRSV---STDNLSP 150
Query: 179 GLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQP 232
L + + GPS S+ P E S + G + PP LR C P
Sbjct: 151 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSP 204
>gi|122939151 Rho GTPase activating protein 9 isoform 2 [Homo
sapiens]
Length = 640
Score = 38.5 bits (88), Expect = 0.007
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Query: 119 GQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAP 178
GQ++W+ GP G+L LSQ Q + P P C +T +P
Sbjct: 99 GQLLWTPGPKLFHGSL-----EELSQALPSRAQASSEQPPPLPRKMCRSV---STDNLSP 150
Query: 179 GLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQP 232
L + + GPS S+ P E S + G + PP LR C P
Sbjct: 151 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSP 204
>gi|238550198 synaptotagmin III [Homo sapiens]
Length = 590
Score = 37.7 bits (86), Expect = 0.012
Identities = 54/189 (28%), Positives = 70/189 (37%), Gaps = 32/189 (16%)
Query: 71 GSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRV 130
GS GG P+R G G G V G G + G P+ G GP
Sbjct: 88 GSAVGGG--PLRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLG------GPHHH 133
Query: 131 QGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQ 190
H P L + PG G+ PEPS L P A + A G++ PSQ
Sbjct: 134 AHAAHHPPFAELLE---PGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQ 183
Query: 191 PSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSTVGG 243
S +LPS GSGL P Q +QV P+P Q ++
Sbjct: 184 TSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPD 243
Query: 244 PMAAGEKPP 252
P ++ E+PP
Sbjct: 244 P-SSEERPP 251
>gi|238550196 synaptotagmin III [Homo sapiens]
Length = 590
Score = 37.7 bits (86), Expect = 0.012
Identities = 54/189 (28%), Positives = 70/189 (37%), Gaps = 32/189 (16%)
Query: 71 GSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRV 130
GS GG P+R G G G V G G + G P+ G GP
Sbjct: 88 GSAVGGG--PLRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLG------GPHHH 133
Query: 131 QGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQ 190
H P L + PG G+ PEPS L P A + A G++ PSQ
Sbjct: 134 AHAAHHPPFAELLE---PGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQ 183
Query: 191 PSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSTVGG 243
S +LPS GSGL P Q +QV P+P Q ++
Sbjct: 184 TSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPD 243
Query: 244 PMAAGEKPP 252
P ++ E+PP
Sbjct: 244 P-SSEERPP 251
>gi|14150054 synaptotagmin III [Homo sapiens]
Length = 590
Score = 37.7 bits (86), Expect = 0.012
Identities = 54/189 (28%), Positives = 70/189 (37%), Gaps = 32/189 (16%)
Query: 71 GSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRV 130
GS GG P+R G G G V G G + G P+ G GP
Sbjct: 88 GSAVGGG--PLRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLG------GPHHH 133
Query: 131 QGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQ 190
H P L + PG G+ PEPS L P A + A G++ PSQ
Sbjct: 134 AHAAHHPPFAELLE---PGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQ 183
Query: 191 PSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSTVGG 243
S +LPS GSGL P Q +QV P+P Q ++
Sbjct: 184 TSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPD 243
Query: 244 PMAAGEKPP 252
P ++ E+PP
Sbjct: 244 P-SSEERPP 251
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 37.7 bits (86), Expect = 0.012
Identities = 56/201 (27%), Positives = 75/201 (37%), Gaps = 34/201 (16%)
Query: 35 GSVGVGRRVPDAGSECVGHRVPDAGSECVGHRAPDAG-SVCGGAGPPMR-GQWGWGAGSP 92
GS G GS +G + D GS +GH P G GPP R G G
Sbjct: 1248 GSPGAPGPPGPPGSHVIGIK-GDKGS--MGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPG 1304
Query: 93 MRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQC 152
RG + P ++G+ + P G I GPP G +GP
Sbjct: 1305 PRGDPGFQGFPGVKGE---KGNPGFLGSI----GPPGPIGP------------KGPPGVR 1345
Query: 153 GNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQL-PSYPEEGSGLSRGHKD 211
G+ P +++ P P +P PG+Q P GP P L P P G KD
Sbjct: 1346 GD--PGTLKIISLPGSPGPPGTPGEPGMQGEP--GPPGPPGNLGPCGPRGKPG-----KD 1396
Query: 212 ARPGPPGQEREQVLRACAPQP 232
+PG PG E+ + +P
Sbjct: 1397 GKPGTPGPAGEKGNKGSKGEP 1417
Score = 35.4 bits (80), Expect = 0.060
Identities = 69/259 (26%), Positives = 86/259 (33%), Gaps = 63/259 (24%)
Query: 67 APDAGSVCGGAGPPMRGQWGWGA-GSP-MRG-QSVWGA-GPP----MRGQCVWRA----- 113
+P + G AGPP G+G G P ++G Q V GA GPP RG+
Sbjct: 603 SPGSPGPAGPAGPP-----GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGP 657
Query: 114 -GPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRG------------PGRQCGNSLPEPS 160
GPP GPP + G+L C L G PG + P
Sbjct: 658 PGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTK 717
Query: 161 SMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYP-------EEGSGLSRGH--KD 211
L CP + P PGL +P++ +P P E G+ G
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLP----GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLP 773
Query: 212 ARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRL---GSAHQGLP---- 264
PG PG + L P G P GE+ P R QGLP
Sbjct: 774 GLPGLPGTPGNEGLDGPRGDP---------GQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 265 ---TSAFEGACHALGDPGI 280
G GDPGI
Sbjct: 825 LKGQQGRRGKTGPKGDPGI 843
Score = 28.5 bits (62), Expect = 7.4
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 20/106 (18%)
Query: 195 LPSYPEEGSGLS-RGH--KDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKP 251
LP +P + RG +D PGP G++ E L P P+ G P A G K
Sbjct: 1141 LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPR--------GNPGAQGAKG 1192
Query: 252 PVSRLGSAHQGLPTSAFEGACHALGDPGIF--TGLEAGDRTVSVPG 295
R GLP G A+GD G TG+E +PG
Sbjct: 1193 --DRGAPGFPGLP-----GRKGAMGDAGPRGPTGIEGFPGPPGLPG 1231
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 37.7 bits (86), Expect = 0.012
Identities = 56/201 (27%), Positives = 75/201 (37%), Gaps = 34/201 (16%)
Query: 35 GSVGVGRRVPDAGSECVGHRVPDAGSECVGHRAPDAG-SVCGGAGPPMR-GQWGWGAGSP 92
GS G GS +G + D GS +GH P G GPP R G G
Sbjct: 1248 GSPGAPGPPGPPGSHVIGIK-GDKGS--MGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPG 1304
Query: 93 MRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQC 152
RG + P ++G+ + P G I GPP G +GP
Sbjct: 1305 PRGDPGFQGFPGVKGE---KGNPGFLGSI----GPPGPIGP------------KGPPGVR 1345
Query: 153 GNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQL-PSYPEEGSGLSRGHKD 211
G+ P +++ P P +P PG+Q P GP P L P P G KD
Sbjct: 1346 GD--PGTLKIISLPGSPGPPGTPGEPGMQGEP--GPPGPPGNLGPCGPRGKPG-----KD 1396
Query: 212 ARPGPPGQEREQVLRACAPQP 232
+PG PG E+ + +P
Sbjct: 1397 GKPGTPGPAGEKGNKGSKGEP 1417
Score = 35.4 bits (80), Expect = 0.060
Identities = 69/259 (26%), Positives = 86/259 (33%), Gaps = 63/259 (24%)
Query: 67 APDAGSVCGGAGPPMRGQWGWGA-GSP-MRG-QSVWGA-GPP----MRGQCVWRA----- 113
+P + G AGPP G+G G P ++G Q V GA GPP RG+
Sbjct: 603 SPGSPGPAGPAGPP-----GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGP 657
Query: 114 -GPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRG------------PGRQCGNSLPEPS 160
GPP GPP + G+L C L G PG + P
Sbjct: 658 PGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTK 717
Query: 161 SMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYP-------EEGSGLSRGH--KD 211
L CP + P PGL +P++ +P P E G+ G
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLP----GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLP 773
Query: 212 ARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRL---GSAHQGLP---- 264
PG PG + L P G P GE+ P R QGLP
Sbjct: 774 GLPGLPGTPGNEGLDGPRGDP---------GQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 265 ---TSAFEGACHALGDPGI 280
G GDPGI
Sbjct: 825 LKGQQGRRGKTGPKGDPGI 843
Score = 28.5 bits (62), Expect = 7.4
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 20/106 (18%)
Query: 195 LPSYPEEGSGLS-RGH--KDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKP 251
LP +P + RG +D PGP G++ E L P P+ G P A G K
Sbjct: 1141 LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPR--------GNPGAQGAKG 1192
Query: 252 PVSRLGSAHQGLPTSAFEGACHALGDPGIF--TGLEAGDRTVSVPG 295
R GLP G A+GD G TG+E +PG
Sbjct: 1193 --DRGAPGFPGLP-----GRKGAMGDAGPRGPTGIEGFPGPPGLPG 1231
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 37.7 bits (86), Expect = 0.012
Identities = 56/201 (27%), Positives = 75/201 (37%), Gaps = 34/201 (16%)
Query: 35 GSVGVGRRVPDAGSECVGHRVPDAGSECVGHRAPDAG-SVCGGAGPPMR-GQWGWGAGSP 92
GS G GS +G + D GS +GH P G GPP R G G
Sbjct: 1248 GSPGAPGPPGPPGSHVIGIK-GDKGS--MGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPG 1304
Query: 93 MRGQSVWGAGPPMRGQCVWRAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQC 152
RG + P ++G+ + P G I GPP G +GP
Sbjct: 1305 PRGDPGFQGFPGVKGE---KGNPGFLGSI----GPPGPIGP------------KGPPGVR 1345
Query: 153 GNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQL-PSYPEEGSGLSRGHKD 211
G+ P +++ P P +P PG+Q P GP P L P P G KD
Sbjct: 1346 GD--PGTLKIISLPGSPGPPGTPGEPGMQGEP--GPPGPPGNLGPCGPRGKPG-----KD 1396
Query: 212 ARPGPPGQEREQVLRACAPQP 232
+PG PG E+ + +P
Sbjct: 1397 GKPGTPGPAGEKGNKGSKGEP 1417
Score = 35.4 bits (80), Expect = 0.060
Identities = 69/259 (26%), Positives = 86/259 (33%), Gaps = 63/259 (24%)
Query: 67 APDAGSVCGGAGPPMRGQWGWGA-GSP-MRG-QSVWGA-GPP----MRGQCVWRA----- 113
+P + G AGPP G+G G P ++G Q V GA GPP RG+
Sbjct: 603 SPGSPGPAGPAGPP-----GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGP 657
Query: 114 -GPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRG------------PGRQCGNSLPEPS 160
GPP GPP + G+L C L G PG + P
Sbjct: 658 PGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTK 717
Query: 161 SMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYP-------EEGSGLSRGH--KD 211
L CP + P PGL +P++ +P P E G+ G
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLP----GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLP 773
Query: 212 ARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKPPVSRL---GSAHQGLP---- 264
PG PG + L P G P GE+ P R QGLP
Sbjct: 774 GLPGLPGTPGNEGLDGPRGDP---------GQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 265 ---TSAFEGACHALGDPGI 280
G GDPGI
Sbjct: 825 LKGQQGRRGKTGPKGDPGI 843
Score = 28.5 bits (62), Expect = 7.4
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 20/106 (18%)
Query: 195 LPSYPEEGSGLS-RGH--KDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAGEKP 251
LP +P + RG +D PGP G++ E L P P+ G P A G K
Sbjct: 1141 LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPR--------GNPGAQGAKG 1192
Query: 252 PVSRLGSAHQGLPTSAFEGACHALGDPGIF--TGLEAGDRTVSVPG 295
R GLP G A+GD G TG+E +PG
Sbjct: 1193 --DRGAPGFPGLP-----GRKGAMGDAGPRGPTGIEGFPGPPGLPG 1231
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 37.7 bits (86), Expect = 0.012
Identities = 33/135 (24%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 146 RGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPG-----------------LQECPRTGP 188
RGPG +S +P+S + P + +A P PG ++ GP
Sbjct: 578 RGPGSSGTDSTRKPASAVGTPDKAQKAPGPG-PGQEVYFSLKDMYLENTQAVRPLGEEGP 636
Query: 189 SQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSTVGGPMAAG 248
S++ P +G R + PG PGQ + PQP + P G
Sbjct: 637 QTLSVRAPGESPKGKAPLRARSEGVPGAPGQPTHSL----TPQPTRPFNRKRFAPPKPKG 692
Query: 249 E----KPPVSRLGSA 259
E P+S L A
Sbjct: 693 EATTDSKPISSLSQA 707
Score = 35.4 bits (80), Expect = 0.060
Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 22/129 (17%)
Query: 7 GPRCGVRVCGAQGPRC-------GVSVWGCRAPDVGSVGV-GRRVPDAGSECVGHRVPDA 58
GP R C QG + G W P V GR P G + V P A
Sbjct: 101 GPLQTRRYCRHQGRQGSGLGAGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVTTARPPA 160
Query: 59 GSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPM-RGQCVWRAGPPM 117
+ G R P AG+ G GP GAG+ G++ AGP + G + P
Sbjct: 161 INR--GARQPRAGAAAAGRGP--------GAGAWRTGEAAASAGPAVGEGGAMGSRRAPS 210
Query: 118 RGQIVWSAG 126
RG W AG
Sbjct: 211 RG---WGAG 216
Score = 28.1 bits (61), Expect = 9.6
Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 17/125 (13%)
Query: 116 PMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSP 175
P+ G ++ A PP +G++ RGP + S CP++ P
Sbjct: 995 PLSGNLMLPAQPPH-EGSVEQVGGERC---RGPQSSGPVEAKQEDSPFQCPKEERPGGVP 1050
Query: 176 AAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQE----------REQVL 225
CP G SQ +PS P G+GL+ K P + +QVL
Sbjct: 1051 CMDQ-GGCPLAGLSQEVPTMPSLP--GTGLTASPKAGPCSTPTSQHGSTATFLPSEDQVL 1107
Query: 226 RACAP 230
+ AP
Sbjct: 1108 MSSAP 1112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.137 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,891,771
Number of Sequences: 37866
Number of extensions: 1236207
Number of successful extensions: 5681
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 503
Number of HSP's that attempted gapping in prelim test: 4988
Number of HSP's gapped (non-prelim): 1091
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.