Search of human proteins with 169179745

Search of human proteins with 169179745

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169179745 PREDICTED: hypothetical protein [Homo sapiens]
         (132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169184020 PREDICTED: hypothetical protein [Homo sapiens]           275   6e-75
gi|169179745 PREDICTED: hypothetical protein [Homo sapiens]           275   6e-75
gi|169180144 PREDICTED: hypothetical protein [Homo sapiens]           275   6e-75
gi|33286436 gametogenetin [Homo sapiens]                               35   0.017
gi|5729858 nuclear receptor coactivator 2 [Homo sapiens]               33   0.050
gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]           33   0.050
gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo ...    33   0.050
gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo ...    33   0.050
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    33   0.065
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    33   0.065
gi|31542255 hypothetical protein LOC140706 [Homo sapiens]              33   0.065
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]         33   0.085
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]            32   0.11 
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ...    32   0.11 
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ...    32   0.11 
gi|169206319 PREDICTED: hypothetical protein [Homo sapiens]            32   0.15 
gi|169206579 PREDICTED: hypothetical protein [Homo sapiens]            32   0.15 
gi|239744865 PREDICTED: hypothetical protein [Homo sapiens]            32   0.15 
gi|6912752 zinc finger protein 281 [Homo sapiens]                      32   0.15 
gi|223633935 hypothetical protein LOC254427 [Homo sapiens]             32   0.19 
gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa...    32   0.19 
gi|239752866 PREDICTED: similar to hCG1997308 [Homo sapiens]           32   0.19 
gi|239747418 PREDICTED: hypothetical protein XP_002346694 [Homo ...    32   0.19 
gi|239741243 PREDICTED: hypothetical protein XP_002342142 [Homo ...    32   0.19 
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]                32   0.19 
gi|239755879 PREDICTED: hypothetical protein XP_002344729 [Homo ...    31   0.25 
gi|239750409 PREDICTED: hypothetical protein XP_002347416 [Homo ...    31   0.25 
gi|239744709 PREDICTED: hypothetical protein XP_002343201 [Homo ...    31   0.25 
gi|145199237 transcription elongation factor B polypeptide 3 bin...    31   0.25 
gi|61676082 shadow of prion protein [Homo sapiens]                     31   0.32 

>gi|169184020 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 132

 Score =  275 bits (704), Expect = 6e-75
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60
           MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG
Sbjct: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60

Query: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120
           IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA
Sbjct: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120

Query: 121 GSGDNRPSDELG 132
           GSGDNRPSDELG
Sbjct: 121 GSGDNRPSDELG 132


>gi|169179745 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 132

 Score =  275 bits (704), Expect = 6e-75
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60
           MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG
Sbjct: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60

Query: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120
           IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA
Sbjct: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120

Query: 121 GSGDNRPSDELG 132
           GSGDNRPSDELG
Sbjct: 121 GSGDNRPSDELG 132


>gi|169180144 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 132

 Score =  275 bits (704), Expect = 6e-75
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60
           MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG
Sbjct: 1   MKRCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRG 60

Query: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120
           IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA
Sbjct: 61  IREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPA 120

Query: 121 GSGDNRPSDELG 132
           GSGDNRPSDELG
Sbjct: 121 GSGDNRPSDELG 132


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 17  SLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRG-------------SRGIRE 63
           SL  P    S +   +LGG G G + +    + +  ++ +G             SRG +E
Sbjct: 252 SLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEVLKQGPLPPGAARPLGEVSRGAQE 311

Query: 64  AE------LGAQTDPPLSWSRPTALQSPPYSSSP 91
           AE       G    P    S+  AL  PPY++ P
Sbjct: 312 AEGGDGDGEGCSGPPSAPASQARALPPPPYTTFP 345


>gi|5729858 nuclear receptor coactivator 2 [Homo sapiens]
          Length = 1464

 Score = 33.5 bits (75), Expect = 0.050
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 19/118 (16%)

Query: 6   PSQRFSLPASLSLT-HPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRGIREA 64
           P Q  +L ++++   + P ++ G   G  GG G  + +S     G +    +GS    + 
Sbjct: 413 PGQDMTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVS-----GMQATTPQGSNYALKM 467

Query: 65  ELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGS 122
              +Q+ P ++  +PT++ SP +  SP V       G P         PP    PAGS
Sbjct: 468 NSPSQSSPGMNPGQPTSMLSPRHRMSPGVA------GSP-------RIPPSQFSPAGS 512


>gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]
          Length = 410

 Score = 33.5 bits (75), Expect = 0.050
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 16  LSLTHPPLQRSGSGSGALG------GDGDGDVLSLGR---GVGFKRIISRGSRGIREAEL 66
           L    P L  +GSG G  G        G G  +  GR   G      + RGS        
Sbjct: 24  LQFLQPLLSEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPY 83

Query: 67  GAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGS 122
             + D  ++ + P A  SP +   P++   S  PG P  +      PPG+ + + S
Sbjct: 84  RPEEDSRMTPASPEARTSPVHPKFPKIPETSVAPGSPATA-----GPPGSWVTSAS 134


>gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo
           sapiens]
          Length = 410

 Score = 33.5 bits (75), Expect = 0.050
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 16  LSLTHPPLQRSGSGSGALG------GDGDGDVLSLGR---GVGFKRIISRGSRGIREAEL 66
           L    P L  +GSG G  G        G G  +  GR   G      + RGS        
Sbjct: 24  LQFLQPLLSEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPY 83

Query: 67  GAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGS 122
             + D  ++ + P A  SP +   P++   S  PG P  +      PPG+ + + S
Sbjct: 84  RPEEDSRMTPASPEARTSPVHPKFPKIPETSVAPGSPATA-----GPPGSWVTSAS 134


>gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo
           sapiens]
          Length = 410

 Score = 33.5 bits (75), Expect = 0.050
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 16  LSLTHPPLQRSGSGSGALG------GDGDGDVLSLGR---GVGFKRIISRGSRGIREAEL 66
           L    P L  +GSG G  G        G G  +  GR   G      + RGS        
Sbjct: 24  LQFLQPLLSEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPY 83

Query: 67  GAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGS 122
             + D  ++ + P A  SP +   P++   S  PG P  +      PPG+ + + S
Sbjct: 84  RPEEDSRMTPASPEARTSPVHPKFPKIPETSVAPGSPATA-----GPPGSWVTSAS 134


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 33.1 bits (74), Expect = 0.065
 Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 25  RSGSGSGALGGDGDGDVLSLGRGVGFKR--IISRGSRGIREAELGAQTDPPLSWSR---P 79
           R+  G G    +G       GRG G  R  + +  S         +  DP  + S    P
Sbjct: 124 RASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVP 183

Query: 80  TALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGSGDNRP 127
            A +S   +  P+       PG P+RS  Q  PPP  + PA      P
Sbjct: 184 RARRSSRRALQPRHAAPDA-PGAPSRSTSQATPPPAPRFPASRRPGAP 230


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 33.1 bits (74), Expect = 0.065
 Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 25  RSGSGSGALGGDGDGDVLSLGRGVGFKR--IISRGSRGIREAELGAQTDPPLSWSR---P 79
           R+  G G    +G       GRG G  R  + +  S         +  DP  + S    P
Sbjct: 124 RASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVP 183

Query: 80  TALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGSGDNRP 127
            A +S   +  P+       PG P+RS  Q  PPP  + PA      P
Sbjct: 184 RARRSSRRALQPRHAAPDA-PGAPSRSTSQATPPPAPRFPASRRPGAP 230


>gi|31542255 hypothetical protein LOC140706 [Homo sapiens]
          Length = 433

 Score = 33.1 bits (74), Expect = 0.065
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 74  LSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQ 109
           ++WSR      P  SSS + CCGST  G P+R+  Q
Sbjct: 396 ITWSRCGVSWGPSRSSSLRCCCGSTGWGCPSRTIAQ 431


>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
          Length = 547

 Score = 32.7 bits (73), Expect = 0.085
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 6   PSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRI-------ISRGS 58
           PSQR    A+ S   P +  +GSG+GA GG G G   + G G   + I       + RGS
Sbjct: 19  PSQRMRRSAAGS--PPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQLLRGS 76

Query: 59  R--------GIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRS 106
           +            A LG+   P  +     +  +PP +++P       K GRP RS
Sbjct: 77  QHSPTRPPVAAAAASLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRAK-GRPRRS 131


>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 180

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 5   LPSQRFSLPASLSLTHPPLQRSGSGS-GALGGDGDGDVLSLGRGVGFKRIISR----GSR 59
           LP +  S P+  +   PPLQ+   G+ GALG       +S G   G +    +    G  
Sbjct: 26  LPGETLS-PSPRAAALPPLQQRPPGAPGALGRPKP---VSRGPRAGLREWPQQPWRPGPL 81

Query: 60  GIREAELGAQTDPPLSWSRPTALQSPPYSS----SPQVCCGSTKPGRPTRSCIQQEPPPG 115
           G    +       P S SRPTA  +PP  S    +  V   +  PGRP      +EP P 
Sbjct: 82  GAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQ 141

Query: 116 NKLP 119
           +  P
Sbjct: 142 DGTP 145


>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
           sapiens]
          Length = 180

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 5   LPSQRFSLPASLSLTHPPLQRSGSGS-GALGGDGDGDVLSLGRGVGFKRIISR----GSR 59
           LP +  S P+  +   PPLQ+   G+ GALG       +S G   G +    +    G  
Sbjct: 26  LPGETLS-PSPRAAALPPLQQRPPGAPGALGRPKP---VSRGPRAGLREWPQQPWRPGPL 81

Query: 60  GIREAELGAQTDPPLSWSRPTALQSPPYSS----SPQVCCGSTKPGRPTRSCIQQEPPPG 115
           G    +       P S SRPTA  +PP  S    +  V   +  PGRP      +EP P 
Sbjct: 82  GAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQ 141

Query: 116 NKLP 119
           +  P
Sbjct: 142 DGTP 145


>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
           sapiens]
          Length = 180

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 5   LPSQRFSLPASLSLTHPPLQRSGSGS-GALGGDGDGDVLSLGRGVGFKRIISR----GSR 59
           LP +  S P+  +   PPLQ+   G+ GALG       +S G   G +    +    G  
Sbjct: 26  LPGETLS-PSPRAAALPPLQQRPPGAPGALGRPKP---VSRGPRAGLREWPQQPWRPGPL 81

Query: 60  GIREAELGAQTDPPLSWSRPTALQSPPYSS----SPQVCCGSTKPGRPTRSCIQQEPPPG 115
           G    +       P S SRPTA  +PP  S    +  V   +  PGRP      +EP P 
Sbjct: 82  GAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQ 141

Query: 116 NKLP 119
           +  P
Sbjct: 142 DGTP 145


>gi|169206319 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 45  GRGVGFK----RIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKP 100
           G G GF     R+ SRG R  R+        PPL   RP  L+      S    CG+ + 
Sbjct: 3   GFGAGFPAQGARLRSRGPRSHRQGRSSVHHAPPL---RPGPLRGQRSQESSLYLCGTDRN 59

Query: 101 GRPTRSCIQQEP 112
            RP R    + P
Sbjct: 60  PRPARRTWTERP 71


>gi|169206579 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 45  GRGVGFK----RIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKP 100
           G G GF     R+ SRG R  R+        PPL   RP  L+      S    CG+ + 
Sbjct: 3   GFGAGFPAQGARLRSRGPRSHRQGRSSVHHAPPL---RPGPLRGQRSQESSLYLCGTDRN 59

Query: 101 GRPTRSCIQQEP 112
            RP R    + P
Sbjct: 60  PRPARRTWTERP 71


>gi|239744865 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 45  GRGVGFK----RIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKP 100
           G G GF     R+ SRG R  R+        PPL   RP  L+      S    CG+ + 
Sbjct: 3   GFGAGFPAQGARLRSRGPRSHRQGRSSVHHAPPL---RPGPLRGQRSQESSLYLCGTDRN 59

Query: 101 GRPTRSCIQQEP 112
            RP R    + P
Sbjct: 60  PRPARRTWTERP 71


>gi|6912752 zinc finger protein 281 [Homo sapiens]
          Length = 895

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 31/118 (26%)

Query: 27  GSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRGIREAEL-----------GAQTDPPLS 75
           G G+G+ GG G G   S G G G       GS G R AE+             +  P  S
Sbjct: 11  GGGTGSSGGSGSGGGGSGGGGGG-------GSSG-RRAEMEPTFPQGMVMFNHRLPPVTS 62

Query: 76  WSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPG-----NKLPAGSGDNRPS 128
           ++RP    +PP    PQ    S+    P     +  PPP       K PA S    PS
Sbjct: 63  FTRPAGSAAPP----PQCVLSSSTSAAP---AAEPPPPPAPDMTFKKEPAASAAAFPS 113


>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
          Length = 435

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 28  SGSGALGGDGDGDVLSLGRGV-GFKRIISRGSRGIREAELGAQTDPPLSWSRPTALQSPP 86
           +G GA GG    + ++ GRG+ G    +  G +  R   L A   P    S   AL+S P
Sbjct: 302 AGEGAPGGGSSPERVARGRGLPGPAESLRAGGQAPRGPAL-ANGFP----SAHEALKSAP 356

Query: 87  YSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLPAGSGDNRPSDEL 131
            S +P       +PG    S   ++  PG + P G+ D R +D L
Sbjct: 357 SSFAPAGKSLCFRPGPALPSTRARQSFPGPRQPNGAQDWRRADSL 401


>gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa
           regulatory subunit [Homo sapiens]
          Length = 290

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 45  GRGVGFKRIISRGSRGIREAELGAQTDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPT 104
           GRG GF     R  R  R   +  QT P          Q P  S  P++C     PG P 
Sbjct: 209 GRGPGFLSFRRRRPRSGRLRGVPGQTLPAFRGLGRRLPQGP--SLCPRLC-----PGGPV 261

Query: 105 RSCIQQEPPPGNKLPAGS 122
           R   +  P PG++ P G+
Sbjct: 262 RLRPRARPSPGSRSPCGA 279


>gi|239752866 PREDICTED: similar to hCG1997308 [Homo sapiens]
          Length = 173

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 41  VLSLG--RGVGFKRIISRGSRGIREAELGAQTDPPLSWSRP--TALQSPPYSSSPQVCCG 96
           V++LG  RGVG K  + +  RG R   L + +DP  S + P    LQ  P +  PQ    
Sbjct: 27  VVALGSRRGVGRKTPVVQPGRGTRNVNLKSSSDPEASLTPPPVPTLQVAPEAPCPQSHLS 86

Query: 97  STKPG 101
            T  G
Sbjct: 87  FTSEG 91


>gi|239747418 PREDICTED: hypothetical protein XP_002346694 [Homo
           sapiens]
          Length = 173

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 41  VLSLG--RGVGFKRIISRGSRGIREAELGAQTDPPLSWSRP--TALQSPPYSSSPQVCCG 96
           V++LG  RGVG K  + +  RG R   L + +DP  S + P    LQ  P +  PQ    
Sbjct: 27  VVALGSRRGVGRKTPVVQPGRGTRNVNLKSSSDPEASLTPPPVPTLQVAPEAPCPQSHLS 86

Query: 97  STKPG 101
            T  G
Sbjct: 87  FTSEG 91


>gi|239741243 PREDICTED: hypothetical protein XP_002342142 [Homo
           sapiens]
          Length = 173

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 41  VLSLG--RGVGFKRIISRGSRGIREAELGAQTDPPLSWSRP--TALQSPPYSSSPQVCCG 96
           V++LG  RGVG K  + +  RG R   L + +DP  S + P    LQ  P +  PQ    
Sbjct: 27  VVALGSRRGVGRKTPVVQPGRGTRNVNLKSSSDPEASLTPPPVPTLQVAPEAPCPQSHLS 86

Query: 97  STKPG 101
            T  G
Sbjct: 87  FTSEG 91


>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
          Length = 397

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 33/116 (28%), Positives = 40/116 (34%), Gaps = 25/116 (21%)

Query: 24  QRSGSGSGALGGDGDGDVLSLGRGVG---------FKRIISRGSRGIREAELGAQTDPPL 74
           Q  G G G   G G G     G+G G            +++  S G   A  GAQ  P  
Sbjct: 176 QAEGQGQGQGQGQGQGQGQGQGQGQGQGQGRRPGLVSAVLAEASWGSPSACPGAQAAPER 235

Query: 75  ---------SWSRP---TALQSPPYSSSPQVCCGSTKPGRPTRSC--IQQEPPPGN 116
                     W+ P     +QSPPYSS  Q          P + C   Q  P P N
Sbjct: 236 LGRGVHDTDPWATPPYCPKIQSPPYSS--QGTTSDASLWTPPQGCPWTQSSPEPRN 289


>gi|239755879 PREDICTED: hypothetical protein XP_002344729 [Homo
           sapiens]
          Length = 90

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 8/47 (17%)

Query: 73  PLSWSRPTALQSPPYSSSP-QVCCGSTK--PGRPTRSCIQQEPPPGN 116
           PLS +RP+ ++SP  ++ P  +C G+ +  PGRP        P PGN
Sbjct: 39  PLSRTRPSRIRSPELAARPAPLCAGADRRSPGRPPAG-----PSPGN 80


>gi|239750409 PREDICTED: hypothetical protein XP_002347416 [Homo
           sapiens]
          Length = 90

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 8/47 (17%)

Query: 73  PLSWSRPTALQSPPYSSSP-QVCCGSTK--PGRPTRSCIQQEPPPGN 116
           PLS +RP+ ++SP  ++ P  +C G+ +  PGRP        P PGN
Sbjct: 39  PLSRTRPSRIRSPELAARPAPLCAGADRRSPGRPPAG-----PSPGN 80


>gi|239744709 PREDICTED: hypothetical protein XP_002343201 [Homo
           sapiens]
          Length = 90

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 8/47 (17%)

Query: 73  PLSWSRPTALQSPPYSSSP-QVCCGSTK--PGRPTRSCIQQEPPPGN 116
           PLS +RP+ ++SP  ++ P  +C G+ +  PGRP        P PGN
Sbjct: 39  PLSRTRPSRIRSPELAARPAPLCAGADRRSPGRPPAG-----PSPGN 80


>gi|145199237 transcription elongation factor B polypeptide 3
           binding protein 1 [Homo sapiens]
          Length = 1221

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 70  TDPPLSWSRPTALQSPPYSSSPQVCCGSTKPGRPTRSCIQQEPPPGNKLP-AGSGDNRP 127
           + P     RP   +  P S++P    G  +P RP R   +  P  G+  P AG G  RP
Sbjct: 421 SSPRRKAERPEGTKKKPSSATPVATSGKGRPDRPAR---RPSPTSGDSRPAAGRGPPRP 476


>gi|61676082 shadow of prion protein [Homo sapiens]
          Length = 151

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 3   RCLPSQRFSLPASLSLTHPPLQRSGSGSGALGGDGDGDVLSLGRGVGFKRIISRGSRGIR 62
           R  P+QR+  P S            + +GA  G   G    L  G G++R    G RG+ 
Sbjct: 50  RVRPAQRYGAPGSSLRV--------AAAGAAAGAAAGAAAGLAAGSGWRRAAGPGERGLE 101

Query: 63  EAELG 67
           + E G
Sbjct: 102 DEEDG 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.134    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,751,291
Number of Sequences: 37866
Number of extensions: 461688
Number of successful extensions: 1960
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 1850
Number of HSP's gapped (non-prelim): 243
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.