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Search of human proteins with 169173140
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173140 PREDICTED: hypothetical protein LOC100131112 [Homo
sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169173140 PREDICTED: hypothetical protein LOC100131112 [Homo ... 337 3e-93
gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens] 31 0.40
gi|153267418 EDAR-associated death domain isoform A [Homo sapiens] 31 0.52
gi|18152769 EDAR-associated death domain isoform B [Homo sapiens] 31 0.52
gi|124430752 kinesin family member 26B [Homo sapiens] 30 1.2
gi|224831253 optic atrophy 1 isoform 8 [Homo sapiens] 27 5.7
gi|224831251 optic atrophy 1 isoform 7 [Homo sapiens] 27 5.7
gi|18860841 optic atrophy 1 isoform 6 [Homo sapiens] 27 5.7
gi|224831248 optic atrophy 1 isoform 5 [Homo sapiens] 27 5.7
gi|18860835 optic atrophy 1 isoform 4 [Homo sapiens] 27 5.7
gi|18860833 optic atrophy 1 isoform 3 [Homo sapiens] 27 5.7
gi|18860831 optic atrophy 1 isoform 2 [Homo sapiens] 27 5.7
gi|224831243 optic atrophy 1 isoform 1 [Homo sapiens] 27 5.7
gi|4557845 ribonucleotide reductase M2 polypeptide [Homo sapiens] 27 5.7
gi|73747917 transporter 2, ATP-binding cassette, sub-family B is... 27 5.7
gi|73747915 transporter 2, ATP-binding cassette, sub-family B is... 27 5.7
gi|56550061 leukocyte membrane antigen [Homo sapiens] 27 7.5
gi|169202863 PREDICTED: hypothetical protein [Homo sapiens] 27 9.8
gi|169203519 PREDICTED: hypothetical protein [Homo sapiens] 27 9.8
gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo ... 27 9.8
gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo sa... 27 9.8
gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo sa... 27 9.8
gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo sa... 27 9.8
gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens] 27 9.8
gi|42544136 ribonucleotide reductase M2 B (TP53 inducible) [Homo... 27 9.8
gi|34304381 inversin isoform a [Homo sapiens] 27 9.8
gi|34304379 inversin isoform b [Homo sapiens] 27 9.8
>gi|169173140 PREDICTED: hypothetical protein LOC100131112 [Homo
sapiens]
Length = 160
Score = 337 bits (864), Expect = 3e-93
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MIRNTDINLLMDKKYWLSYKVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEG 60
MIRNTDINLLMDKKYWLSYKVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEG
Sbjct: 1 MIRNTDINLLMDKKYWLSYKVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEG 60
Query: 61 CKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLWTAPGLSGLQNKQQD 120
CKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLWTAPGLSGLQNKQQD
Sbjct: 61 CKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLWTAPGLSGLQNKQQD 120
Query: 121 CSVVRVNFGWGLKEFQLSSANGDIKCSFHTHAYTLMYTCS 160
CSVVRVNFGWGLKEFQLSSANGDIKCSFHTHAYTLMYTCS
Sbjct: 121 CSVVRVNFGWGLKEFQLSSANGDIKCSFHTHAYTLMYTCS 160
>gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]
Length = 333
Score = 31.2 bits (69), Expect = 0.40
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 41 HCQQLFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKE 98
H + L E + +L ++ K SW P EF SE F Y DVS ++ +
Sbjct: 158 HSRALLLVTEDILKLNASSKSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSGLVND 215
>gi|153267418 EDAR-associated death domain isoform A [Homo sapiens]
Length = 215
Score = 30.8 bits (68), Expect = 0.52
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 54 QLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS------LWT 107
+LP E C I+ M+ E FP T D L EI K+ K + L
Sbjct: 50 ELPKAEECDTITLNCPRNSDMKNQGEENGFPDSTGD-PLPEISKDNSCKENCTCSSCLLR 108
Query: 108 APGLSGLQNKQQDCSVVRV 126
AP +S L N Q V+R+
Sbjct: 109 APTISDLLNDQDLLDVIRI 127
>gi|18152769 EDAR-associated death domain isoform B [Homo sapiens]
Length = 205
Score = 30.8 bits (68), Expect = 0.52
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 54 QLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS------LWT 107
+LP E C I+ M+ E FP T D L EI K+ K + L
Sbjct: 40 ELPKAEECDTITLNCPRNSDMKNQGEENGFPDSTGD-PLPEISKDNSCKENCTCSSCLLR 98
Query: 108 APGLSGLQNKQQDCSVVRV 126
AP +S L N Q V+R+
Sbjct: 99 APTISDLLNDQDLLDVIRI 117
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 23 SIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQM 82
S+ + ++ S P ++ RL T V++ P++ G + + S P+ ++
Sbjct: 1931 SLKTPKKRSNPGSQRRRLIPALSLDTSSPVRKPPNSTGVRWVDGPLRSSPR-GLGEPFEI 1989
Query: 83 FPYRTQDVSLKEIMKEEGIKWSLWTAPGLSGLQNKQQDCSVVRVNFGWGLKEFQ 136
Y DV + + K ++ L L+++QQ + VR + W +KE +
Sbjct: 1990 KVYEIDDVERLQRRRGGASKEAMCFNAKLKILEHRQQRIAEVRAKYEWLMKELE 2043
>gi|224831253 optic atrophy 1 isoform 8 [Homo sapiens]
Length = 1015
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 718 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 769
>gi|224831251 optic atrophy 1 isoform 7 [Homo sapiens]
Length = 997
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 700 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 751
>gi|18860841 optic atrophy 1 isoform 6 [Homo sapiens]
Length = 979
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 682 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 733
>gi|224831248 optic atrophy 1 isoform 5 [Homo sapiens]
Length = 978
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 681 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 732
>gi|18860835 optic atrophy 1 isoform 4 [Homo sapiens]
Length = 961
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 664 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 715
>gi|18860833 optic atrophy 1 isoform 3 [Homo sapiens]
Length = 942
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 645 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 696
>gi|18860831 optic atrophy 1 isoform 2 [Homo sapiens]
Length = 924
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 627 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 678
>gi|224831243 optic atrophy 1 isoform 1 [Homo sapiens]
Length = 960
Score = 27.3 bits (59), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 KQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWSLW 106
KQLP+ +++W+ + F +E + + LKE +KEE IK W
Sbjct: 663 KQLPNK--AVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKW 714
>gi|4557845 ribonucleotide reductase M2 polypeptide [Homo sapiens]
Length = 389
Score = 27.3 bits (59), Expect = 5.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 15 YWLSYKVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEGCKQISWQAVSRPQM 74
+WL K G +P ++ R LHC ++ + PS E ++I AV R +
Sbjct: 244 FWLK-KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAV-RIEQ 301
Query: 75 EFYSEA 80
EF +EA
Sbjct: 302 EFLTEA 307
>gi|73747917 transporter 2, ATP-binding cassette, sub-family B
isoform 2 [Homo sapiens]
Length = 653
Score = 27.3 bits (59), Expect = 5.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 100 GIKWSLWTAPGLSGLQNKQQD 120
G+ WSLW G Q K+QD
Sbjct: 110 GLSWSLWAVLSPPGAQEKEQD 130
>gi|73747915 transporter 2, ATP-binding cassette, sub-family B
isoform 1 [Homo sapiens]
Length = 703
Score = 27.3 bits (59), Expect = 5.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 100 GIKWSLWTAPGLSGLQNKQQD 120
G+ WSLW G Q K+QD
Sbjct: 110 GLSWSLWAVLSPPGAQEKEQD 130
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 26.9 bits (58), Expect = 7.5
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 20 KVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSE 79
K G QN A Q+ LH L +++ P+ ++ + V+ P+ E +
Sbjct: 209 KAGDHSELSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYA 268
Query: 80 AQMFPYRTQDVSLKEIMKEE 99
+ +F T ++ + +EE
Sbjct: 269 SVVFDSNTNRIAAQRPREEE 288
>gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]
Length = 527
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 222 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 277
Query: 105 L 105
L
Sbjct: 278 L 278
>gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]
Length = 527
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 222 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 277
Query: 105 L 105
L
Sbjct: 278 L 278
>gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo
sapiens]
Length = 339
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 169 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 224
Query: 105 L 105
L
Sbjct: 225 L 225
>gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo
sapiens]
Length = 279
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 109 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 164
Query: 105 L 105
L
Sbjct: 165 L 165
>gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo
sapiens]
Length = 302
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 132 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 187
Query: 105 L 105
L
Sbjct: 188 L 188
>gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo
sapiens]
Length = 333
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 45 LFTTYEAVKQLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS 104
LF T + +K +N+ K SW P E SE F Y +VS ++ + W
Sbjct: 163 LFVTEDILKLYATNKS-KLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVND---NWK 218
Query: 105 L 105
L
Sbjct: 219 L 219
>gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens]
Length = 863
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 90 VSLKEIMKEEGIKWSLWTAPGLSGLQNKQQDC---SVVRVNFGWGLKEFQ 136
VS E+++E G K PG +GL+N C SV++ F + EFQ
Sbjct: 314 VSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIF--SIPEFQ 361
>gi|42544136 ribonucleotide reductase M2 B (TP53 inducible) [Homo
sapiens]
Length = 351
Score = 26.6 bits (57), Expect = 9.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 15 YWLSYKVGSIPSTRQNSFPAHRQARLHCQQLFTTYEAVKQLPSNEGCKQISWQAVSRPQM 74
+WL K G +P ++ R LHC ++ + PS E ++I AV + +
Sbjct: 206 FWLK-KRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAV-KIEQ 263
Query: 75 EFYSEA 80
EF +EA
Sbjct: 264 EFLTEA 269
>gi|34304381 inversin isoform a [Homo sapiens]
Length = 1065
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 7 INLLMDKKYWLSYKVGSIPSTRQNSFPAHRQARLHCQQ---LFTTYEAVKQLPSNEGCKQ 63
++LL+++ K G+IPS Q + P H A+ + + +F + +VK EG
Sbjct: 271 VHLLLERN-----KSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTS 325
Query: 64 ISWQA 68
W A
Sbjct: 326 FMWAA 330
>gi|34304379 inversin isoform b [Homo sapiens]
Length = 895
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 7 INLLMDKKYWLSYKVGSIPSTRQNSFPAHRQARLHCQQ---LFTTYEAVKQLPSNEGCKQ 63
++LL+++ K G+IPS Q + P H A+ + + +F + +VK EG
Sbjct: 271 VHLLLERN-----KSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTS 325
Query: 64 ISWQA 68
W A
Sbjct: 326 FMWAA 330
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.130 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,272,483
Number of Sequences: 37866
Number of extensions: 249375
Number of successful extensions: 462
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 457
Number of HSP's gapped (non-prelim): 27
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.