Guide to the Human Genome
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Name: GLYATL1 Sequence: fasta or formatted (333aa) NCBI GI: 31543157
Description:

glycine-N-acyltransferase-like 1

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         11           2
 C cysteine            2.1          7           1
 D aspartate           4.2         14           2
 E glutamate           9.3         31           2
 F phenylalanine       3.9         13           2
 G glycine             5.7         19           1
 H histidine           2.1          7           1
 I isoleucine          4.5         15           2
 K lysine              6.0         20           1
 L leucine             8.4         28           3
 M methionine          4.2         14           1
 N asparagine          4.8         16           1
 P proline             4.5         15           1
 Q glutamine           4.8         16           1
 R arginine            5.4         18           2
 S serine              9.0         30           2
 T threonine           2.7          9           1
 V valine              8.1         27           1
 W tryptophan          2.4          8           1
 Y tyrosine            4.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycine-N-acyltransferase-like 1 
LOC643637             0.807   PREDICTED: similar to hCG1729961 isoform 1 
LOC643637             0.699   PREDICTED: similar to hCG1729961 isoform 3 
LOC100287520          0.689   PREDICTED: hypothetical protein XP_002343130 
LOC643637             0.610   PREDICTED: similar to hCG1729961 isoform 2 
LOC643637             0.569   PREDICTED: hypothetical protein 
LOC643637             0.568   PREDICTED: hypothetical protein 
GLYATL2               0.375   glycine-N-acyltransferase-like 2 
GLYAT                 0.287   glycine-N-acyltransferase isoform a 
C6orf140              0.195   glycine N-acyltransferase-like protein 3 
GLYAT                 0.165   glycine-N-acyltransferase isoform b 
TCP1                  0.012   T-complex protein 1 isoform b 
TCP1                  0.012   T-complex protein 1 isoform a 
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
LOC100131112          0.009   PREDICTED: hypothetical protein LOC100131112 
EPB41L4A              0.008   erythrocyte protein band 4.1-like 4 
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 1 ...
RAPH1                 0.005   Ras association and pleckstrin homology domains 1 is...
RAPH1                 0.005   Ras association and pleckstrin homology domains 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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