OPA1 10277

Name: OPA1	Sequence: fasta or formatted (979aa)		NCBI GI: 18860841
Description: optic atrophy 1 isoform 6		Referenced in: Additional Brain Proteins Additional Membrane Functions
Other entries for this name: alt prot [924aa] optic atrophy 1 isoform 2 alt prot [942aa] optic atrophy 1 isoform 3 alt prot [961aa] optic atrophy 1 isoform 4 alt prot [960aa] optic atrophy 1 isoform 1 alt prot [978aa] optic atrophy 1 isoform 5 alt prot [997aa] optic atrophy 1 isoform 7 alt prot [1015aa] optic atrophy 1 isoform 8
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 56 2 C cysteine 1.0 10 1 D aspartate 5.5 54 2 E glutamate 9.3 91 3 F phenylalanine 3.4 33 2 G glycine 3.9 38 3 H histidine 3.0 29 2 I isoleucine 5.3 52 2 K lysine 8.5 83 2 L leucine 10.8 106 5 M methionine 2.0 20 2 N asparagine 3.8 37 2 P proline 3.1 30 1 Q glutamine 5.5 54 3 R arginine 6.5 64 2 S serine 6.6 65 2 T threonine 5.2 51 2 V valine 6.4 63 4 W tryptophan 1.8 18 1 Y tyrosine 2.6 25 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 optic atrophy 1 isoform 6 OPA1 0.991 optic atrophy 1 isoform 8 OPA1 0.978 optic atrophy 1 isoform 7 OPA1 0.978 optic atrophy 1 isoform 4 OPA1 0.954 optic atrophy 1 isoform 3 OPA1 0.945 optic atrophy 1 isoform 5 OPA1 0.932 optic atrophy 1 isoform 1 OPA1 0.932 optic atrophy 1 isoform 2 DNM2 0.046 dynamin 2 isoform 4 DNM2 0.046 dynamin 2 isoform 2 DNM2 0.046 dynamin 2 isoform 1 DNM2 0.046 dynamin 2 isoform 3 DNM1 0.043 dynamin 1 isoform 2 DNM1 0.043 dynamin 1 isoform 1 DNM1L 0.041 dynamin 1-like isoform 1 DNM1L 0.041 dynamin 1-like isoform 3 DNM1L 0.041 dynamin 1-like isoform 2 DNM3 0.040 dynamin 3 isoform a DNM3 0.040 dynamin 3 isoform b MX1 0.040 myxovirus resistance protein 1 MX1 0.040 myxovirus resistance protein 1 MX2 0.038 myxovirus resistance protein 2 RNF214 0.009 ring finger protein 214 RNF214 0.009 ring finger protein 214 BAZ2B 0.008 bromodomain adjacent to zinc finger domain, 2B [Homo... C1orf65 0.008 hypothetical protein LOC164127 GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 RB1CC1 0.007 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.007 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... KRT73 0.007 keratin 73 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.