Guide to the Human Genome
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Name: EDARADD Sequence: fasta or formatted (205aa) NCBI GI: 18152769
Description:

EDAR-associated death domain isoform B

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [215aa] EDAR-associated death domain isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9          6           1
 C cysteine            4.4          9           1
 D aspartate          10.2         21           2
 E glutamate           8.3         17           2
 F phenylalanine       2.9          6           1
 G glycine             2.9          6           1
 H histidine           2.0          4           1
 I isoleucine          2.9          6           1
 K lysine              5.4         11           1
 L leucine            10.2         21           2
 M methionine          2.9          6           1
 N asparagine          5.4         11           1
 P proline             8.3         17           1
 Q glutamine           3.4          7           1
 R arginine            7.3         15           2
 S serine              7.8         16           2
 T threonine           5.4         11           1
 V valine              3.9          8           1
 W tryptophan          2.0          4           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EDAR-associated death domain isoform B 
EDARADD               0.951   EDAR-associated death domain isoform A 
TRHDE                 0.022   thyrotropin-releasing hormone degrading enzyme 
TMEFF2                0.017   transmembrane protein with EGF-like and two follista...
BFAR                  0.015   bifunctional apoptosis regulator 
LOC100131112          0.015   PREDICTED: hypothetical protein LOC100131112 
GPR155                0.015   G protein-coupled receptor 155 isoform 9 
GPR155                0.015   G protein-coupled receptor 155 isoform 10 
RGPD1                 0.012   RANBP2-like and GRIP domain containing 1 
RGPD2                 0.012   RANBP2-like and GRIP domain containing 2 
UNC5CL                0.012   unc-5 homolog C-like 
RBM19                 0.010   RNA binding motif protein 19 
RBM19                 0.010   RNA binding motif protein 19 
RBM19                 0.010   RNA binding motif protein 19 
ACAN                  0.010   aggrecan isoform 2 precursor 
ACAN                  0.010   aggrecan isoform 1 precursor 
KIAA1409              0.007   hypothetical protein LOC57578 
FRYL                  0.007   furry-like 
UPF1                  0.007   regulator of nonsense transcripts 1 
DNAH3                 0.007   dynein, axonemal, heavy chain 3 
BAIAP2                0.005   BAI1-associated protein 2 isoform 4 
BAIAP2                0.005   BAI1-associated protein 2 isoform 3 
BAIAP2                0.005   BAI1-associated protein 2 isoform 1 
BAIAP2                0.005   BAI1-associated protein 2 isoform 2 
SPOCK3                0.005   testican 3 isoform 1 
SPOCK3                0.005   testican 3 isoform 2 
OLFM4                 0.005   olfactomedin 4 precursor 
PCGF5                 0.005   polycomb group ring finger 5 
NARG2                 0.005   NMDA receptor regulated 2 isoform b 
NARG2                 0.005   NMDA receptor regulated 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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