OPA1 10273

Name: OPA1	Sequence: fasta or formatted (924aa)		NCBI GI: 18860831
Description: optic atrophy 1 isoform 2		Referenced in: Additional Brain Proteins Additional Membrane Functions
Other entries for this name: alt prot [942aa] optic atrophy 1 isoform 3 alt prot [961aa] optic atrophy 1 isoform 4 alt prot [979aa] optic atrophy 1 isoform 6 alt prot [960aa] optic atrophy 1 isoform 1 alt prot [978aa] optic atrophy 1 isoform 5 alt prot [997aa] optic atrophy 1 isoform 7 alt prot [1015aa] optic atrophy 1 isoform 8
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 51 2 C cysteine 1.1 10 1 D aspartate 5.7 53 2 E glutamate 9.2 85 3 F phenylalanine 3.6 33 2 G glycine 3.6 33 3 H histidine 2.9 27 2 I isoleucine 5.3 49 2 K lysine 8.7 80 2 L leucine 10.3 95 2 M methionine 2.2 20 2 N asparagine 4.0 37 2 P proline 3.2 30 1 Q glutamine 5.1 47 2 R arginine 6.6 61 2 S serine 6.6 61 2 T threonine 5.4 50 2 V valine 6.6 61 4 W tryptophan 1.9 18 1 Y tyrosine 2.5 23 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 optic atrophy 1 isoform 2 OPA1 0.994 optic atrophy 1 isoform 3 OPA1 0.990 optic atrophy 1 isoform 1 OPA1 0.990 optic atrophy 1 isoform 4 OPA1 0.984 optic atrophy 1 isoform 5 OPA1 0.984 optic atrophy 1 isoform 6 OPA1 0.980 optic atrophy 1 isoform 7 OPA1 0.974 optic atrophy 1 isoform 8 DNM2 0.049 dynamin 2 isoform 4 DNM2 0.049 dynamin 2 isoform 2 DNM2 0.049 dynamin 2 isoform 1 DNM2 0.049 dynamin 2 isoform 3 DNM1 0.045 dynamin 1 isoform 2 DNM1 0.045 dynamin 1 isoform 1 DNM1L 0.043 dynamin 1-like isoform 1 DNM1L 0.043 dynamin 1-like isoform 3 DNM1L 0.043 dynamin 1-like isoform 2 DNM3 0.043 dynamin 3 isoform a DNM3 0.043 dynamin 3 isoform b MX1 0.042 myxovirus resistance protein 1 MX1 0.042 myxovirus resistance protein 1 MX2 0.041 myxovirus resistance protein 2 GOLGA4 0.008 golgi autoantigen, golgin subfamily a, 4 RB1CC1 0.008 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.008 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... KRT73 0.008 keratin 73 KRT74 0.007 keratin 6 irs4 UACA 0.007 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.007 uveal autoantigen with coiled-coil domains and ankyr... KRT71 0.007 keratin 71 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.