Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RRM2 Sequence: fasta or formatted (389aa) NCBI GI: 4557845
Description:

ribonucleotide reductase M2 polypeptide

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         28           3
 C cysteine            1.3          5           1
 D aspartate           4.4         17           1
 E glutamate          10.5         41           2
 F phenylalanine       7.7         30           2
 G glycine             4.4         17           1
 H histidine           1.8          7           1
 I isoleucine          6.4         25           3
 K lysine              6.2         24           3
 L leucine             9.3         36           2
 M methionine          3.3         13           1
 N asparagine          3.3         13           1
 P proline             5.1         20           2
 Q glutamine           3.1         12           2
 R arginine            5.7         22           2
 S serine              6.2         24           2
 T threonine           4.4         17           1
 V valine              5.9         23           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonucleotide reductase M2 polypeptide 
RRM2B                 0.711   ribonucleotide reductase M2 B (TP53 inducible) [Homo...
ITGB7                 0.012   integrin, beta 7 
TAF4                  0.011   TBP-associated factor 4 
VPS8                  0.007   vacuolar protein sorting 8 homolog isoform b 
VPS8                  0.007   vacuolar protein sorting 8 homolog isoform a 
INCENP                0.007   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.007   inner centromere protein antigens 135/155kDa isofor...
HSD17B4               0.007   hydroxysteroid (17-beta) dehydrogenase 4 
KLHDC10               0.005   kelch domain containing 10 
MRPL37                0.005   mitochondrial ribosomal protein L37 
GAS2L3                0.005   growth arrest-specific 2 like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press