Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 111120318
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
(367 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 729 0.0
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi... 331 6e-91
gi|89257348 homeo box HB9 [Homo sapiens] 102 7e-22
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 100 2e-21
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 91 2e-18
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 87 2e-17
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 86 5e-17
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 85 1e-16
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 84 2e-16
gi|126090909 engrailed homeobox 1 [Homo sapiens] 84 3e-16
gi|157743259 H6 family homeobox 3 [Homo sapiens] 82 6e-16
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 82 1e-15
gi|14149611 empty spiracles homeobox 2 [Homo sapiens] 82 1e-15
gi|157426823 NK2 homeobox 4 [Homo sapiens] 81 2e-15
gi|116174748 developing brain homeobox 2 [Homo sapiens] 81 2e-15
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 4e-15
gi|70608170 H6 family homeobox 2 [Homo sapiens] 79 8e-15
gi|94536800 empty spiracles homolog 1 [Homo sapiens] 78 1e-14
gi|118582284 msh homeobox 1 [Homo sapiens] 78 1e-14
gi|22749179 NK6 homeobox 3 [Homo sapiens] 77 2e-14
gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens] 77 2e-14
gi|11386181 H2.0-like homeobox [Homo sapiens] 77 2e-14
gi|121114296 caudal type homeobox 1 [Homo sapiens] 77 2e-14
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 3e-14
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 3e-14
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 3e-14
gi|197333837 notochord homeobox [Homo sapiens] 76 5e-14
gi|226437602 NK1 homeobox 2 [Homo sapiens] 75 7e-14
gi|153218470 BarH-like homeobox 1 [Homo sapiens] 75 9e-14
gi|13273315 homeobox B4 [Homo sapiens] 74 2e-13
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 729 bits (1883), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MLAVGAMEGTRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSP 60
MLAVGAMEGTRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSP
Sbjct: 1 MLAVGAMEGTRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSP 60
Query: 61 SPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASP 120
SPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASP
Sbjct: 61 SPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASP 120
Query: 121 SGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPS 180
SGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPS
Sbjct: 121 SGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPS 180
Query: 181 AAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTR 240
AAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTR
Sbjct: 181 AAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTR 240
Query: 241 PTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMA 300
PTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMA
Sbjct: 241 PTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMA 300
Query: 301 TAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSSGGGGGLLLHA 360
TAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSSGGGGGLLLHA
Sbjct: 301 TAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSSGGGGGLLLHA 360
Query: 361 SEPESSS 367
SEPESSS
Sbjct: 361 SEPESSS 367
>gi|28912912 NK6 transcription factor related, locus 2 [Homo
sapiens]
Length = 277
Score = 331 bits (849), Expect = 6e-91
Identities = 189/356 (53%), Positives = 215/356 (60%), Gaps = 89/356 (25%)
Query: 7 MEGTRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGT 66
M+ R AF+LSS PLAALH+MAEMKT L+P A
Sbjct: 1 MDTNRPGAFVLSSAPLAALHNMAEMKTSLFPYAL-------------------------- 34
Query: 67 HNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSS 126
P G K PA GGL + QL TPHGI+DIL RP
Sbjct: 35 QGPAGFKAPALGGLGA------QLPLGTPHGISDILGRP--------------------- 67
Query: 127 SSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAA 186
++ GLL GLPR + L+ G+YF P+AA
Sbjct: 68 ----------------------VGAAGGGLLGGLPRLNGLASSA---GVYFGPAAAVARG 102
Query: 187 VGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQ 246
YPKPLAELPGR PIFWPGV+Q PWRD RLA G +L DKDGK+KH+RPTFSGQ
Sbjct: 103 ---YPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVL-DKDGKKKHSRPTFSGQ 158
Query: 247 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQ 306
QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK+HAAEMA+AKKKQ
Sbjct: 159 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQ 218
Query: 307 DSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSS-------GGGGG 355
DS+ E+LK + E+DD+YN+PLDPNSDDEKIT+LLKKHK S+ GGG G
Sbjct: 219 DSDAEKLKVGGSDAEDDDEYNRPLDPNSDDEKITRLLKKHKPSNLALVSPCGGGAG 274
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 102 bits (253), Expect = 7e-22
Identities = 104/356 (29%), Positives = 149/356 (41%), Gaps = 49/356 (13%)
Query: 11 RQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPG 70
R A L PP AA A + AA G +S +S P + P
Sbjct: 8 RIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPA 67
Query: 71 GLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPS-MPVASGAALPSASPSGSSSSSSS 129
PA + SPP+ L+A +L +P + G G +
Sbjct: 68 A---PADRLRAESPSPPRLLAAHCA-----LLPKPGFLGAGGGGGGTGGGHGGPHHHAHP 119
Query: 130 SASASSASAAAAAAAAAAAAASSPAGLL--AGLPRFSSLSPPPPPPGLY-FSPSAAAVAA 186
A+A++A+AAAAAAA A P G AGLP ++L P +Y +S +AAA A
Sbjct: 120 GAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHP----VYGYSAAAAAAAL 175
Query: 187 VGRYPKPLAELP---GRTPI-------FWPGVMQSPPWRDARLAC----------TPHQG 226
G++P P G P G Q W A A + Q
Sbjct: 176 AGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQS 235
Query: 227 SILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQN 286
++L GK + R F+ QQ+ LE F+ KYL+ P+R +A SL +TE+QVK+WFQN
Sbjct: 236 NLL----GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQN 291
Query: 287 RRTKWRKKHAAEMATAKKKQDSETERLK----GASENEEEDDDYNKPLDPNSDDEK 338
RR KW++ AK++ E E+ K GA + E+ + L P + +K
Sbjct: 292 RRMKWKRS-----KKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDK 342
>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
Length = 291
Score = 100 bits (249), Expect = 2e-21
Identities = 86/263 (32%), Positives = 119/263 (45%), Gaps = 29/263 (11%)
Query: 91 SAATPH-------GINDILSRPSMPVA------SGAALPSASPSGSSSSSSSSASASSAS 137
SA TPH GI+ IL+ P A GA+ P G ++ S AS A
Sbjct: 6 SAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLPASFAG 65
Query: 138 AAAAAAAAAAAAAS---SPAGLLAGLPRFSSLS---PPPPPPGLYFSPSAAAVAAVGRYP 191
A A + + + +PAG++ +P L PPP P L PS V+++G
Sbjct: 66 LGAPFEDAGSYSVNLSLAPAGVIR-VPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGGLN 124
Query: 192 KPLAELPGR-TPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFA 250
P E R + P+ R P+Q KRK R +FS QI
Sbjct: 125 FPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRT----PPKRKKPRTSFSRVQICE 180
Query: 251 LEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSET 310
LEK F + KYLA ERA LA SL MT++QVK WFQNRRTKWR++ A E ++ + +
Sbjct: 181 LEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEE----REAERQQA 236
Query: 311 ERLKGASENEEEDDDYNKPLDPN 333
RL +++ N + P+
Sbjct: 237 SRLMLQLQHDAFQKSLNDSIQPD 259
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 90.5 bits (223), Expect = 2e-18
Identities = 73/210 (34%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 97 GINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGL 156
GI+ ILS P P G G + + S AS A + A SS G
Sbjct: 20 GIDQILSGPETP--GGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGP 77
Query: 157 LAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRD 216
G+ R + P P PP P+ A A G P L G + +P + +
Sbjct: 78 -GGVIRVPAHRPLPVPP-----PAGGAPAVPG--PSGLGGAGGLAGLTFPWMDSGRRFAK 129
Query: 217 ARL--ACTPHQGSILLDKD------GKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERAR 268
RL A +P G+ + KRK R +FS Q+ LE+ F + KYLA ERA
Sbjct: 130 DRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAA 189
Query: 269 LAYSLGMTESQVKVWFQNRRTKWRKKHAAE 298
LA +L MT++QVK WFQNRRTKWR++ A E
Sbjct: 190 LAKALRMTDAQVKTWFQNRRTKWRRQTAEE 219
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 87.4 bits (215), Expect = 2e-17
Identities = 75/255 (29%), Positives = 109/255 (42%), Gaps = 47/255 (18%)
Query: 52 SSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVAS 111
S++++ + + GT PGG PA GG + P + +N M +A
Sbjct: 62 SAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGP-----LTGSYNVN-------MALAG 109
Query: 112 GAALPSASPSGSSSSSSSSASASSASAAAAAA-AAAAAAASSPAGLLAGLPRFSSLSPPP 170
G P G SS + + S+A A A A + P L GLP S+ P
Sbjct: 110 GPG-----PGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSV---P 161
Query: 171 PPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILL 230
PG+ T + +P + + + R P+Q
Sbjct: 162 AMPGVN----------------------NLTGLTFPWMESNRRYTKDRFTGHPYQNRT-- 197
Query: 231 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 290
K+K R +F+ QI LEK F + KYLA ERA LA +L MT++QVK WFQNRRTK
Sbjct: 198 --PPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTK 255
Query: 291 WRKKHAAEMATAKKK 305
WR++ A E +++
Sbjct: 256 WRRQTAEEREAERQQ 270
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 85.9 bits (211), Expect = 5e-17
Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 11/262 (4%)
Query: 34 PLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAA 93
P+ PAA P + P + + ++S + L G GG+ + G+ P +A
Sbjct: 68 PVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAG-----AGGVGAAGAEPP--NAG 120
Query: 94 TPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSP 153
P + + + +SG S S + AA A A
Sbjct: 121 DPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGG 180
Query: 154 AGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPP 213
GL A + PG +AA R P+A+ P PG + P
Sbjct: 181 GGLGARGSGCQGAAETDASPGATVDEAAAPGP---RENSPVAQGPPGGAAA-PGGAGTTP 236
Query: 214 WRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSL 273
A A + + K GK + R F+ +Q+ ALE F+ T+YL+ ER LA SL
Sbjct: 237 QGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSL 296
Query: 274 GMTESQVKVWFQNRRTKWRKKH 295
+TE+QVK+WFQNRRTKW+K++
Sbjct: 297 SLTETQVKIWFQNRRTKWKKQN 318
Score = 31.2 bits (69), Expect = 1.5
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 29 AEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPP----LGTHNPGGLKPPATGGL 80
A+ P P AGP + S SPSPP LG H P G GGL
Sbjct: 321 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGL 376
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 84.7 bits (208), Expect = 1e-16
Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 11/262 (4%)
Query: 34 PLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAA 93
P+ PAA P + P + + ++S + L G GG+ + G+ P +A
Sbjct: 471 PVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAG-----AGGVGAAGAEPP--NAG 523
Query: 94 TPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSP 153
P + + + +SG S S + AA A A
Sbjct: 524 DPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGG 583
Query: 154 AGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPP 213
GL A + PG +AA R P+A P PG + P
Sbjct: 584 GGLGARGSGCQGAAETDASPGATVDEAAAPGP---RENSPVAPGPPGGAAA-PGGAGTTP 639
Query: 214 WRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSL 273
A A + + K GK + R F+ +Q+ ALE F+ T+YL+ ER LA SL
Sbjct: 640 QGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSL 699
Query: 274 GMTESQVKVWFQNRRTKWRKKH 295
+TE+QVK+WFQNRRTKW+K++
Sbjct: 700 SLTETQVKIWFQNRRTKWKKQN 721
Score = 31.2 bits (69), Expect = 1.5
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 29 AEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPP----LGTHNPGGLKPPATGGL 80
A+ P P AGP + S SPSPP LG H P G GGL
Sbjct: 724 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGL 779
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 84.3 bits (207), Expect = 2e-16
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 188 GRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQ 247
G + AEL R P G ++ + A +G + + G++K TR FS Q
Sbjct: 158 GAVQREAAELAARGPA--AGTEEASELAEVPAAAGETRGGVGVG-GGRKKKTRTVFSRSQ 214
Query: 248 IFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATA 302
+F LE TF+ +YL+ ERA LA SL +TE+QVK+WFQNRR KW+++ AAE+ A
Sbjct: 215 VFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAA 269
Score = 30.4 bits (67), Expect = 2.6
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 146 AAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPS----AAAVAAVGRYPKPLAELPG 199
AAAAA PA L L + +P PPPP L FS + AA A P A++PG
Sbjct: 292 AAAAAGPPATLPFPL---APAAPAPPPPLLGFSGALAYPLAAFPAAASVPFLRAQMPG 346
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 83.6 bits (205), Expect = 3e-16
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 70 GGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVAS-GAALPSASPSGSSSSSS 128
GG + G ++ G P G +L P + P+A+ +G+S + +
Sbjct: 138 GGGRVERDRGQTAAGRDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAAGAGASKAGN 197
Query: 129 SSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVG 188
+A+A++A+AA AAAAAAAAA S G G P Y A+ +G
Sbjct: 198 PAAAAAAAAAAVAAAAAAAAAKPSDTG---GGGSGGGAGSPGAQGTKYPEHGNPAILLMG 254
Query: 189 RYPK-PLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKR-KHTRPTFSGQ 246
P+ + + P+ WP + + D R + P + K+ K K R F+ +
Sbjct: 255 SANGGPVVKTDSQQPLVWPAWVYCTRYSD-RPSSGPRTRKLKKKKNEKEDKRPRTAFTAE 313
Query: 247 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 293
Q+ L+ F+ +Y+ R LA L + ESQ+K+WFQN+R K +K
Sbjct: 314 QLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIKK 360
Score = 37.7 bits (86), Expect = 0.016
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 110 ASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSP----AGLLAGLPRFSS 165
A GAA +A+P G S S S AS SS S + + + + P A L L
Sbjct: 15 ALGAAA-AATPGGLSLSLSPGASGSSGSGSDGDSVPVSPQPAPPSPPAAPCLPPLAHHPH 73
Query: 166 LSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQ 210
L P PPP P +AA P+P A+L T F +++
Sbjct: 74 LPPHPPP------PPPQHLAAPAHQPQPAAQLHRTTNFFIDNILR 112
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 82.4 bits (202), Expect = 6e-16
Identities = 80/280 (28%), Positives = 113/280 (40%), Gaps = 49/280 (17%)
Query: 41 PPLPAGPPSSS-SSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSP-------PQQLSA 92
PP P PP + + +S++++ + G L+ A LS +G P Q A
Sbjct: 45 PPKPQPPPRTLFAPASAAAAAAAAAAAAAKGALEGAAGFALSQVGDLAFPRFEIPAQRFA 104
Query: 93 ATPHGINDILS--RPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAA 150
H + + P +G LP S + SS A+
Sbjct: 105 LPAHYLERSPAWWYPYTLTPAGGHLPRPEASEKALLRDSSP-------------ASGTDR 151
Query: 151 SSPAGLLAGLPRFSSLSPPPPPPGLYFSPSA--------AAVAAVGRYPKPLAELPGRTP 202
SP LL P L P + + AA A G A PG
Sbjct: 152 DSPEPLLKADPDHKELDSKSPDEIILEESDSEESKKEGEAAPGAAGASVGAAAATPGAED 211
Query: 203 IFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLA 262
W +SP + + AC ++K TR FS Q+F LE TF+ +YL+
Sbjct: 212 --WKKGAESP---EKKPAC-------------RKKKTRTVFSRSQVFQLESTFDMKRYLS 253
Query: 263 GPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATA 302
ERA LA SL +TE+QVK+WFQNRR KW+++ AAE+ A
Sbjct: 254 SSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAA 293
Score = 33.5 bits (75), Expect = 0.31
Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 74 PPATGGLSSLGSPPQQLSAA---TPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSS 130
P A G S+ PP A +P I ++L+ P P + +
Sbjct: 6 PDAAGTASAQPQPPPPPPPAPKESPFSIKNLLN-------GDHHRPPPKPQPPPRTLFAP 58
Query: 131 ASASSASAAAAAAAA------AAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAA-- 182
ASA++A+AAAAAAAA AA A S G LA PRF + P Y S A
Sbjct: 59 ASAAAAAAAAAAAAAKGALEGAAGFALSQVGDLA-FPRFEIPAQRFALPAHYLERSPAWW 117
Query: 183 ----AVAAVGRYPKPLA 195
A G P+P A
Sbjct: 118 YPYTLTPAGGHLPRPEA 134
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 81.6 bits (200), Expect = 1e-15
Identities = 86/288 (29%), Positives = 119/288 (41%), Gaps = 63/288 (21%)
Query: 75 PATGGLS-SLGSPPQQLSAA--TPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSA 131
PA G + L +P L A TP I DIL R G A P+ +P+ S +SS ++
Sbjct: 8 PAAGAVGVPLYAPTPLLQPAHPTPFYIEDILGR-------GPAAPTPAPTLPSPNSSFTS 60
Query: 132 SASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAV---G 188
S P + + P P + SAAA+AA G
Sbjct: 61 LVS--------------------------PYRTPVYEPTPIHPAFSHHSAAALAAAYGPG 94
Query: 189 RYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQI 248
+ PL P + +++ P L Q + KRK + FS Q
Sbjct: 95 GFGGPLYPFPRTVNDYTHALLRHDPLGKPLLWSPFLQRPL-----HKRKGGQVRFSNDQT 149
Query: 249 FALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR----------KKHAAE 298
LEK FE KYL+ PER RLA L ++E QVK WFQNRR KWR KK E
Sbjct: 150 IELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELE 209
Query: 299 M--ATAKKKQDSETERLKGASENEEE-------DDDYNKPLDPNSDDE 337
++ ++QD +E+ KGAS + + +D + +SD E
Sbjct: 210 SLDSSCDQRQDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQE 257
>gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
Length = 252
Score = 81.6 bits (200), Expect = 1e-15
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 32/256 (12%)
Query: 98 INDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLL 157
I ++++ S AS + P + S ++SS + +AAAAAA S+P +
Sbjct: 12 IESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVF 71
Query: 158 AGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSP----P 213
A + PP P ++ P A+AA +P P + P P+F + P P
Sbjct: 72 AE----AVSHPPNPAVPVHPVPPPHALAA---HPLPSSHSPH--PLF-ASQQRDPSTFYP 121
Query: 214 WRDARLACTPH--QG------SILLDKD--GKRKHTRPTFSGQQIFALEKTFEQTKYLAG 263
W R H QG S LL K K R FS Q+ LE FE+ Y+ G
Sbjct: 122 WLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVG 181
Query: 264 PERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMAT---AKKKQDSETERLKGASENE 320
ER +LA+SL +TE+QVKVWFQNRRTK++++ E + KKK R + A++
Sbjct: 182 AERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQA 241
Query: 321 EEDDDYNKPLDPNSDD 336
++ +D SDD
Sbjct: 242 SPEE-----IDVTSDD 252
>gi|157426823 NK2 homeobox 4 [Homo sapiens]
Length = 354
Score = 80.9 bits (198), Expect = 2e-15
Identities = 77/260 (29%), Positives = 109/260 (41%), Gaps = 55/260 (21%)
Query: 94 TPHGINDILS------------RPSMPVASGAALPSAS-----PSGSSSSSS-------S 129
TP ++DILS P GA L +A+ P G SS ++ S
Sbjct: 9 TPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPS 68
Query: 130 SASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGR 189
A A +AAAAAAAAAAAAA++ + G+ +F P G S + +G
Sbjct: 69 HAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQF--------PHGAMGSYCNGGLGNMGE 120
Query: 190 YPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPH-------QGSILLDKDGK------- 235
P + G W G P + P GS+ D
Sbjct: 121 LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH 180
Query: 236 --------RKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 287
R+ R FS Q++ LE+ F+Q KYL+ PER LA + +T +QVK+WFQN
Sbjct: 181 AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 240
Query: 288 RTKWRKKHAAEMATAKKKQD 307
R K K+ A + A + +Q+
Sbjct: 241 RYK-MKRQAKDKAAQQLQQE 259
>gi|116174748 developing brain homeobox 2 [Homo sapiens]
Length = 339
Score = 80.9 bits (198), Expect = 2e-15
Identities = 66/196 (33%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 136 ASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYF-----SPSAAAVAAVGRY 190
A+A A A A +SP L P +SP P G + SPSA + GR
Sbjct: 63 ATALATAGAQLRPLPASPVPLKL-CPAAEQVSPAGAPYGTRWAFQVLSPSADSARLPGRA 121
Query: 191 P-------KPLAELPGR-----TPIFWPGVMQSPPWRDARLACTPHQGSIL--LDKDGKR 236
P +P A P + TP F+ R A P + S+L L +D
Sbjct: 122 PGDRDCTFQPSAPAPSKPFLLSTPPFYSACCGGSCRRPASSTAFPREESMLPLLTQDSNS 181
Query: 237 KHTR-----PTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKW 291
K R FS Q ALEK F++ KY++ +R +LA +LG+ ESQVK+WFQNRR KW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241
Query: 292 RKKHAAEMATAKKKQD 307
R E+ + + Q+
Sbjct: 242 RNSKEKEVLSNRCIQE 257
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 79.7 bits (195), Expect = 4e-15
Identities = 59/166 (35%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 132 SASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSP--PPPPPGLYFSPSAAAVAAVGR 189
S S SA A A +PA P ++ L P PP PP P R
Sbjct: 3 SCCSDSADRAFRPRGATPTCTPAQ-----PSWARLRPTRPPEPPSTRQRPPGP------R 51
Query: 190 YPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIF 249
P+A P PG + P A A + + K GK + R F+ +Q+
Sbjct: 52 ENSPVAPGPPGGAAA-PGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLV 110
Query: 250 ALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKH 295
ALE F+ T+YL+ ER LA SL +TE+QVK+WFQNRRTKW+K++
Sbjct: 111 ALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 156
Score = 31.2 bits (69), Expect = 1.5
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 29 AEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPP----LGTHNPGGLKPPATGGL 80
A+ P P AGP + S SPSPP LG H P G GGL
Sbjct: 159 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGL 214
>gi|70608170 H6 family homeobox 2 [Homo sapiens]
Length = 273
Score = 78.6 bits (192), Expect = 8e-15
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 223 PHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 282
P G +K TR FS Q++ LE TF+ +YL+ ERA LA SL +TE+QVK
Sbjct: 136 PRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKT 195
Query: 283 WFQNRRTKWRKKHAAEMATA 302
WFQNRR KW+++ +AE+ A
Sbjct: 196 WFQNRRNKWKRQLSAELEAA 215
>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
Length = 290
Score = 78.2 bits (191), Expect = 1e-14
Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 18/234 (7%)
Query: 109 VASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSP 168
+A+ A+ P+ + S+A A+ S AAAAA A + L G P
Sbjct: 69 LAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRS------LYGGPELV-FPE 121
Query: 169 PPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPI-FWPGVMQSPPWRDARLACTPHQGS 227
P L P+ A+ + P R P+ F+P V+++ + A Q
Sbjct: 122 AMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDG 181
Query: 228 ILLDKDGKRK--HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 285
+LL RK R FS Q+ LE+ FE+ Y+ G ER +LA SL ++E+QVKVWFQ
Sbjct: 182 LLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQ 241
Query: 286 NRRTKWRKKHAAE---MATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDD 336
NRRTK++++ E + KKK R + A++ +D +D S+D
Sbjct: 242 NRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGED-----IDVTSND 290
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 77.8 bits (190), Expect = 1e-14
Identities = 85/266 (31%), Positives = 115/266 (43%), Gaps = 39/266 (14%)
Query: 61 SPPLGTH-NPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSAS 119
S PLG PA GG +P + A G ++ ++P + S + LP +
Sbjct: 9 SLPLGVKVEDSAFGKPAGGGAGQ--APSAAAATAAAMGADEEGAKPKV---SPSLLPFSV 63
Query: 120 PSGSSSSSSSSA--SASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPP----PPP 173
+ + A SA + S AA +A P G L G P S SP P
Sbjct: 64 EALMADHRKPGAKESALAPSEGVQAAGGSAQPLGVPPGSL-GAPDAPS-SPRPLGHFSVG 121
Query: 174 GLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRD-ARLACTPHQGSILLDK 232
GL P A V A E P RTP PP R + ACT L K
Sbjct: 122 GLLKLPEDALVKAES------PEKPERTPWMQSPRFSPPPARRLSPPACT-------LRK 168
Query: 233 DGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 292
+ R F+ Q+ ALE+ F Q +YL+ ERA + SL +TE+QVK+WFQNRR K
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAK-- 226
Query: 293 KKHAAEMATAKKKQDSETERLKGASE 318
AK+ Q++E E+LK A++
Sbjct: 227 ---------AKRLQEAELEKLKMAAK 243
>gi|22749179 NK6 homeobox 3 [Homo sapiens]
Length = 135
Score = 77.4 bits (189), Expect = 2e-14
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 282 VWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASE--NEEEDDDYNKPLDPNSDDEKI 339
VWFQNRRTKWRKK A E +++ + G +E EDD+YNKPLDP+SDDEKI
Sbjct: 55 VWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDEKI 114
Query: 340 TQLLKKHKSS 349
LL+KH+++
Sbjct: 115 RLLLRKHRAA 124
>gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens]
Length = 255
Score = 77.0 bits (188), Expect = 2e-14
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 95 PHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPA 154
P +N +S ++ + G SPS S S SA + A ++A++ S
Sbjct: 7 PESLNSPVSGKAVFMEFGPPNQQMSPSPMSHGHYSMHCLHSAGHSQPDGAYSSASSFSRP 66
Query: 155 GLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPW 214
G P +S+S P +++V YP + R P
Sbjct: 67 ---LGYPYVNSVSSHASSP---------YISSVQSYPGSASLAQSRL---------EDPG 105
Query: 215 RDARLACTPHQGSILLDKDGKR-KHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSL 273
D+ + G + + GK+ + R +S Q+ AL + F+QT+YLA PERA LA SL
Sbjct: 106 ADSEKSTVVEGGEVRFNGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASL 165
Query: 274 GMTESQVKVWFQNRRTKWRK 293
G+T++QVK+WFQN+R+K++K
Sbjct: 166 GLTQTQVKIWFQNKRSKFKK 185
>gi|11386181 H2.0-like homeobox [Homo sapiens]
Length = 488
Score = 77.0 bits (188), Expect = 2e-14
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 235 KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294
KR +R FS Q LEK FE KY+ P+R +LA LG+T++QVKVWFQNRR KWR
Sbjct: 275 KRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR-- 332
Query: 295 HAAEMATAKKKQDSETERLKGASENEEEDDDYNKP 329
H+ E K K E+ G + + + D P
Sbjct: 333 HSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSP 367
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 117 SASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAG----LLAGLPRFSSLSPPPPP 172
SA GSS +S S SSAS+ ++++ +A A+S G LL +S +P P
Sbjct: 420 SAGSGGSSGGGGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQPTASSAPKSPE 479
Query: 173 P 173
P
Sbjct: 480 P 480
>gi|121114296 caudal type homeobox 1 [Homo sapiens]
Length = 265
Score = 77.0 bits (188), Expect = 2e-14
Identities = 77/241 (31%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 71 GLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSS 130
GL P A G + +PPQ ++ + + P+ P A GA P
Sbjct: 24 GLGPQAYGPPAPPPAPPQYPDFSS---YSHVEPAPAPPTAWGAPFP-------------- 66
Query: 131 ASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRY 190
A AAA AA A+SPA L G P S P PP PG G
Sbjct: 67 --APKDDWAAAYGPGPAAPAASPASLAFGPPPDFSPVPAPPGPG------------PGLL 112
Query: 191 PKPLAELPGRTPIFWPGVMQSPP--WRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQI 248
+PL PG TP PG + P W +A GS K + R ++ Q
Sbjct: 113 AQPLGG-PG-TPSS-PGAQRPTPYEWMRRSVAAGGGGGS---GKTRTKDKYRVVYTDHQR 166
Query: 249 FALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDS 308
LEK F ++Y+ ++ LA +LG+TE QVK+WFQNRR K RK + KKKQ
Sbjct: 167 LELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN-------KKKQQQ 219
Query: 309 E 309
+
Sbjct: 220 Q 220
Score = 34.7 bits (78), Expect = 0.14
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 19/100 (19%)
Query: 37 PAAYPPLPAGPPSSSSSSSSSSSPSPP--------------LGTHNPGGLKPPATGGLSS 82
P A PP P P SS S +P+PP + PG P A+ +
Sbjct: 32 PPAPPPAPPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWAAAYGPGPAAPAASPASLA 91
Query: 83 LGSPPQQLSAATPHG-----INDILSRPSMPVASGAALPS 117
G PP P G + L P P + GA P+
Sbjct: 92 FGPPPDFSPVPAPPGPGPGLLAQPLGGPGTPSSPGAQRPT 131
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 3e-14
Identities = 67/215 (31%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 81 SSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAA 140
+S P +QL +L+R + P S A +A P +S + A A
Sbjct: 59 ASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLEGSEAEEEEDAE 118
Query: 141 AAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGR 200
+ A LL GL R P P G S G P R
Sbjct: 119 DPRRPRLRERA--ARLLPGLAR-----SPDAPAGALASGEPCEDGGGG---------PVR 162
Query: 201 TPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKY 260
+P PG SP R RL K + R F+ +Q+ ALE F T+Y
Sbjct: 163 SP---PGSPGSPRPRRRRLE----------PNCAKPRRARTAFTYEQLVALENKFRATRY 209
Query: 261 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKH 295
L+ ER LA SL +TE+QVK+WFQNRRTKW+K++
Sbjct: 210 LSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 244
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 3e-14
Identities = 67/215 (31%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 81 SSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAA 140
+S P +QL +L+R + P S A +A P +S + A A
Sbjct: 59 ASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLEGSEAEEEEDAE 118
Query: 141 AAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGR 200
+ A LL GL R P P G S G P R
Sbjct: 119 DPRRPRLRERA--ARLLPGLAR-----SPDAPAGALASGEPCEDGGGG---------PVR 162
Query: 201 TPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKY 260
+P PG SP R RL K + R F+ +Q+ ALE F T+Y
Sbjct: 163 SP---PGSPGSPRPRRRRLE----------PNCAKPRRARTAFTYEQLVALENKFRATRY 209
Query: 261 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKH 295
L+ ER LA SL +TE+QVK+WFQNRRTKW+K++
Sbjct: 210 LSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 244
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 3e-14
Identities = 67/215 (31%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 81 SSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAA 140
+S P +QL +L+R + P S A +A P +S + A A
Sbjct: 59 ASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLEGSEAEEEEDAE 118
Query: 141 AAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGR 200
+ A LL GL R P P G S G P R
Sbjct: 119 DPRRPRLRERA--ARLLPGLAR-----SPDAPAGALASGEPCEDGGGG---------PVR 162
Query: 201 TPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKY 260
+P PG SP R RL K + R F+ +Q+ ALE F T+Y
Sbjct: 163 SP---PGSPGSPRPRRRRLE----------PNCAKPRRARTAFTYEQLVALENKFRATRY 209
Query: 261 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKH 295
L+ ER LA SL +TE+QVK+WFQNRRTKW+K++
Sbjct: 210 LSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 244
>gi|197333837 notochord homeobox [Homo sapiens]
Length = 251
Score = 75.9 bits (185), Expect = 5e-14
Identities = 80/294 (27%), Positives = 114/294 (38%), Gaps = 50/294 (17%)
Query: 31 MKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQL 90
M +P + PP P+G S S +P P G + P A G S
Sbjct: 1 MPSPRPRGSPPPAPSGSRVRPPRSGRSPAPRSPTGPNT-----PRAPGRFES-------- 47
Query: 91 SAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAA 150
P + IL+RP P A A+ P S SA A AA+ A
Sbjct: 48 ----PFSVEAILARPD-PCAPAASQP-------------SGSACVHPAFWTAASLCATGG 89
Query: 151 SSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQ 210
A + LP + S+ P P P A V + + EL G+
Sbjct: 90 LPWACPTSWLPAYLSVGFYPVP-----GPRVAPVCGLLGFGVTGLEL-----AHCSGLWA 139
Query: 211 SPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLA 270
P W L D + ++K R F+ +Q+ LEK F + L G +RA+LA
Sbjct: 140 FPDWAPT---------EDLQDTERQQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLA 190
Query: 271 YSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
L +TE+QV+VWFQNRR K++K+ A + S E + + + DD
Sbjct: 191 ARLKLTENQVRVWFQNRRVKYQKQQKLRAAVTSAEAASLDEPSSSSIASIQSDD 244
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 75.5 bits (184), Expect = 7e-14
Identities = 51/124 (41%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 173 PGLYFSPSAAAVAAVGRYP-KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLD 231
PGL SP A A A P + P R+P PG SP R RL
Sbjct: 112 PGLARSPDAPAGALASGEPCEDGGGGPVRSP---PGSPGSPRPRRRRLE----------P 158
Query: 232 KDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKW 291
K + R F+ +Q+ ALE F T+YL+ ER LA SL +TE+QVK+WFQNRRTKW
Sbjct: 159 NCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 218
Query: 292 RKKH 295
+K++
Sbjct: 219 KKQN 222
>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
Length = 254
Score = 75.1 bits (183), Expect = 9e-14
Identities = 58/164 (35%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 136 ASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLA 195
A+ AAAAAAA LLA P S L+ F A + G LA
Sbjct: 44 AAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLA 103
Query: 196 ELPGRTPIFWPGVMQSP------PWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIF 249
PG PG +P R A P + K K + +R F+ Q+
Sbjct: 104 AGPGL-----PGAAGAPHLPLELQLRGKLEAAGPGEPGT---KAKKGRRSRTVFTELQLM 155
Query: 250 ALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 293
LEK FE+ KYL+ P+R LA SLG+++ QVK W+QNRR KW+K
Sbjct: 156 GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 74.3 bits (181), Expect = 2e-13
Identities = 49/146 (33%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 168 PPPPPPGLYFSPSAAAVAAVGRY-PKP------LAELPGRTPIFWPGVMQSP-------- 212
PPPPPPGL SP A A G P+P ++ P P + SP
Sbjct: 82 PPPPPPGL--SPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEP 139
Query: 213 ---PWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARL 269
PW T + G+ K +R ++ QQ+ LEK F +YL R +
Sbjct: 140 VVYPWMRKVHVSTVNPNYA----GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEI 195
Query: 270 AYSLGMTESQVKVWFQNRRTKWRKKH 295
A++L ++E Q+K+WFQNRR KW+K H
Sbjct: 196 AHALCLSERQIKIWFQNRRMKWKKDH 221
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.123 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,305,417
Number of Sequences: 37866
Number of extensions: 1176997
Number of successful extensions: 35496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 1805
Number of HSP's that attempted gapping in prelim test: 13644
Number of HSP's gapped (non-prelim): 13244
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.