UBE3A 11353

Name: UBE3A	Sequence: fasta or formatted (852aa)		NCBI GI: 19718762
Description: ubiquitin protein ligase E3A isoform 1		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [872aa] ubiquitin protein ligase E3A isoform 3 alt prot [875aa] ubiquitin protein ligase E3A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 46 3 C cysteine 1.9 16 1 D aspartate 6.2 53 3 E glutamate 9.9 84 2 F phenylalanine 4.9 42 2 G glycine 4.9 42 2 H histidine 1.5 13 1 I isoleucine 5.4 46 2 K lysine 7.4 63 2 L leucine 10.8 92 3 M methionine 2.9 25 2 N asparagine 6.0 51 2 P proline 3.9 33 1 Q glutamine 2.9 25 2 R arginine 5.2 44 2 S serine 5.9 50 3 T threonine 4.7 40 2 V valine 5.5 47 2 W tryptophan 0.4 3 1 Y tyrosine 4.3 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin protein ligase E3A isoform 1 UBE3A 1.000 ubiquitin protein ligase E3A isoform 3 UBE3A 1.000 ubiquitin protein ligase E3A isoform 2 HECTD2 0.191 HECT domain containing 2 isoform a HERC4 0.164 hect domain and RLD 4 isoform b HERC4 0.162 hect domain and RLD 4 isoform a HERC3 0.151 hect domain and RLD 3 HERC5 0.122 hect domain and RLD 5 HERC6 0.119 hect domain and RLD 6 WWP2 0.112 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.112 WW domain containing E3 ubiquitin protein ligase 2 i... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally dow... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... NEDD4L 0.106 neural precursor cell expressed, developmentally do... HUWE1 0.106 HECT, UBA and WWE domain containing 1 WWP1 0.104 WW domain containing E3 ubiquitin protein ligase 1 [... NEDD4 0.104 neural precursor cell expressed, developmentally do... NEDD4 0.104 neural precursor cell expressed, developmentally do... ITCH 0.104 itchy homolog E3 ubiquitin protein ligase SMURF1 0.102 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.102 Smad ubiquitination regulatory factor 1 isoform 2 [H... UBE3C 0.102 ubiquitin protein ligase E3C SMURF2 0.100 SMAD specific E3 ubiquitin protein ligase 2 HACE1 0.099 HECT domain and ankyrin repeat containing, E3 ubiqu... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.