Search of human proteins with 169171483

Search of human proteins with 169171483

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169171483 PREDICTED: hypothetical protein [Homo sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169171483 PREDICTED: hypothetical protein [Homo sapiens]           599   e-172
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    42   5e-04
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]       42   5e-04
gi|55741675 hypothetical protein LOC22889 [Homo sapiens]               40   0.003
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]       39   0.005
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]       39   0.005
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]       39   0.005
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ...    39   0.007
gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo sa...    39   0.007
gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo sa...    39   0.007
gi|148664197 coiled-coil domain containing 40 [Homo sapiens]           39   0.007
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]      38   0.012
gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]       38   0.012
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]       38   0.012
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]       38   0.012
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]       38   0.012
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]       38   0.012
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]       38   0.012
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]       38   0.012
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]        38   0.012
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]        38   0.012
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]        38   0.012
gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]        38   0.012
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]        38   0.012
gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]        38   0.012
gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens]        38   0.012
gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]        38   0.012
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]        38   0.012
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ...    37   0.020
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ...    37   0.020

>gi|169171483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score =  599 bits (1545), Expect = e-172
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MTCGPMWLRMVQAATPGASGLPCSPRQALALYQYLFWCPASPGQLRAALWQVQEGRGYPP 60
           MTCGPMWLRMVQAATPGASGLPCSPRQALALYQYLFWCPASPGQLRAALWQVQEGRGYPP
Sbjct: 1   MTCGPMWLRMVQAATPGASGLPCSPRQALALYQYLFWCPASPGQLRAALWQVQEGRGYPP 60

Query: 61  GLELPPVLLQMEWSRRAQEQLLWDLELLTGVELGLFWPPQAQFFGPRGQAQQAWSQCCQP 120
           GLELPPVLLQMEWSRRAQEQLLWDLELLTGVELGLFWPPQAQFFGPRGQAQQAWSQCCQP
Sbjct: 61  GLELPPVLLQMEWSRRAQEQLLWDLELLTGVELGLFWPPQAQFFGPRGQAQQAWSQCCQP 120

Query: 121 GGSTGGDPEQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPETSHQPQIWV 180
           GGSTGGDPEQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPETSHQPQIWV
Sbjct: 121 GGSTGGDPEQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPETSHQPQIWV 180

Query: 181 KPGVVQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQD 240
           KPGVVQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQD
Sbjct: 181 KPGVVQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQD 240

Query: 241 ALEGLGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDPSA 284
           ALEGLGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDPSA
Sbjct: 241 ALEGLGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDPSA 284


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 48/175 (27%)

Query: 120  PGGSTGGDPEQPSCPVPLITPPG------------LLVAPMVAPQPLE-RLTSKLQLPG- 165
            P    GG     + P  + T PG            LLV P   PQP   +L   L+LPG 
Sbjct: 4041 PSTHQGGPLAIGTTPESMATEPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQ 4100

Query: 166  --------------------SGGRPETSHQPQIWVKPGV-VQTKGGRALEDLQSPHADLA 204
                                SG   E S  P +  +P V +  + G   ++L  P   + 
Sbjct: 4101 QQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQPGSMTQNLLGPQQPML 4160

Query: 205  QREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQ 259
            +R  ++   P+       P  PGP     Q LP      G+G  P +GQ RA+LQ
Sbjct: 4161 ERPMQNNTGPQ-------PPKPGPVLQSGQGLP------GVGIMPTVGQLRAQLQ 4202



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 55/198 (27%), Positives = 74/198 (37%), Gaps = 31/198 (15%)

Query: 99  PQAQFFGPRGQAQQAWSQCCQPGGSTGGDPEQPS-CPVPL---ITPPGLLVAPMVAPQPL 154
           P+     PR +      Q  +P  S    PE+P  C VP    ++P      P ++PQP 
Sbjct: 747 PEEPHLSPRPEEPHLSPQAEEPHLSP--QPEEPCLCAVPEEPHLSPQA--EGPHLSPQPE 802

Query: 155 ERLTSKLQLPGSGGRPETSHQPQIWVKPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           E     L L      P  S  P+   +P +        L   QS    L+ R E S   P
Sbjct: 803 E-----LHLSPQTEEPHLSPVPE---EPCLSPQPEESHLSP-QSEEPCLSPRPEESHLSP 853

Query: 215 ETQKRKLTP----------GTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRM 264
           E +K  L+P            P P +LP    P + +L  L  +P L    +E   PP  
Sbjct: 854 ELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPAL----SEPGEPPLS 909

Query: 265 DTPESERGGPSGSESGDP 282
             PE     PSG  S  P
Sbjct: 910 PLPEELPLSPSGEPSLSP 927



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 19/142 (13%)

Query: 122  GSTGGDPEQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPETSHQPQIWVK 181
            G+TGG P     P PL  P G  +      +  E  +  L LPG    P  S      ++
Sbjct: 3186 GATGGPPAHLLTPSPLSGPGGSSLL-----EKFELESGALTLPGG---PAASGDELDKME 3237

Query: 182  PGVVQTKGGRALEDLQSPHADLAQREER-----SEAEPETQKRKLTPGTPGPGDLPSQNL 236
              +V ++    +EDL        Q++++       A+ + Q+++       PG   + +L
Sbjct: 3238 SSLVASELPLLIEDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSL 3297

Query: 237  PSQDALEGLGSDPHLGQERAEL 258
            P +      GS P L   + +L
Sbjct: 3298 PHE------GSSPSLAGSQQQL 3313


>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
          Length = 825

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 13/147 (8%)

Query: 134 PVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPETSHQPQIWVKPGVVQ-TKGGRA 192
           P  +  PP       V P P E   +++Q P +   P     P     P  VQ      A
Sbjct: 607 PAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEA 666

Query: 193 LEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDP--- 249
             ++Q P A+ A  E +S    ET   +       P   P+ ++P+++A     S P   
Sbjct: 667 PAEVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSP---PADDVPAEEASVDKHSPPADL 723

Query: 250 ------HLGQERAELQRPPRMDTPESE 270
                  +G+  AE+  PP   TPE E
Sbjct: 724 LLTEEFPIGEASAEVSPPPSEQTPEDE 750


>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
          Length = 614

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 54/205 (26%), Positives = 79/205 (38%), Gaps = 29/205 (14%)

Query: 98  PPQAQFFGPRGQAQQAWSQCCQPGGSTGGDPEQPSCPVPLITPPGLLVAPMVAPQ----- 152
           PPQ  ++   G       Q   P       P QP   VP I PP + +AP V P      
Sbjct: 349 PPQPPYYPSNGY------QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGV 402

Query: 153 ---PLERLTSKLQLPGSGGRPETSHQ--PQIWVKPGVVQTKGGRALEDLQSPHADLAQRE 207
              P +   +++Q P S G+        P   VK  +      +       P    AQ+ 
Sbjct: 403 PPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKR 462

Query: 208 ERSEAEPETQKRKLTPGTPGPGDLPS--QNLPSQDALEGLGSDP--HLGQER---AELQR 260
             +E  P+ ++  L     GP  + +      SQ+ +EG GS P    G+ER    +L  
Sbjct: 463 RFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMP 522

Query: 261 PPR-----MDTPESERGGPSGSESG 280
           PP      + T   ER G SG+ +G
Sbjct: 523 PPAFPVTGIKTESDERNG-SGTLTG 546


>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
          Length = 655

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 58/218 (26%), Positives = 78/218 (35%), Gaps = 38/218 (17%)

Query: 92  ELGLFWPPQAQFFGPRGQAQQAWSQCC-------QPGGSTGGDPEQPSCPVPL------- 137
           ++GL  PP     GP+GQ  +   QC        Q   S  G P  P  P P        
Sbjct: 170 DMGLTGPPGQP--GPQGQKGEK-GQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPG 226

Query: 138 ----ITPPGLLVAPMVAPQP----LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGV 184
               + PPGL   P     P          +  +PG  G+      P I V     +PG+
Sbjct: 227 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGI 286

Query: 185 VQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEG 244
             TKG +  E        L Q+ E+ +A       +   G PGP  LP    P  +A   
Sbjct: 287 PGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA--- 340

Query: 245 LGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDP 282
            G D  +G       +  R    E    GP GS+ G+P
Sbjct: 341 -GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSK-GEP 376


>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
          Length = 664

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 58/218 (26%), Positives = 78/218 (35%), Gaps = 38/218 (17%)

Query: 92  ELGLFWPPQAQFFGPRGQAQQAWSQCC-------QPGGSTGGDPEQPSCPVPL------- 137
           ++GL  PP     GP+GQ  +   QC        Q   S  G P  P  P P        
Sbjct: 179 DMGLTGPPGQP--GPQGQKGEK-GQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPG 235

Query: 138 ----ITPPGLLVAPMVAPQP----LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGV 184
               + PPGL   P     P          +  +PG  G+      P I V     +PG+
Sbjct: 236 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGI 295

Query: 185 VQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEG 244
             TKG +  E        L Q+ E+ +A       +   G PGP  LP    P  +A   
Sbjct: 296 PGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA--- 349

Query: 245 LGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDP 282
            G D  +G       +  R    E    GP GS+ G+P
Sbjct: 350 -GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSK-GEP 385


>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
          Length = 676

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 58/218 (26%), Positives = 78/218 (35%), Gaps = 38/218 (17%)

Query: 92  ELGLFWPPQAQFFGPRGQAQQAWSQCC-------QPGGSTGGDPEQPSCPVPL------- 137
           ++GL  PP     GP+GQ  +   QC        Q   S  G P  P  P P        
Sbjct: 191 DMGLTGPPGQP--GPQGQKGEK-GQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPG 247

Query: 138 ----ITPPGLLVAPMVAPQP----LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGV 184
               + PPGL   P     P          +  +PG  G+      P I V     +PG+
Sbjct: 248 LPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGI 307

Query: 185 VQTKGGRALEDLQSPHADLAQREERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEG 244
             TKG +  E        L Q+ E+ +A       +   G PGP  LP    P  +A   
Sbjct: 308 PGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA--- 361

Query: 245 LGSDPHLGQERAELQRPPRMDTPESERGGPSGSESGDP 282
            G D  +G       +  R    E    GP GS+ G+P
Sbjct: 362 -GVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSK-GEP 397


>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
           [Homo sapiens]
          Length = 818

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 60/214 (28%), Positives = 77/214 (35%), Gaps = 37/214 (17%)

Query: 69  LQMEWSRRAQEQLLWDLELLTGVELGLFWPPQAQFFGPRGQAQQAWSQCCQPGGSTGGDP 128
           LQ    ++ Q+Q L   +LL   +L    PPQA    P   A            S G  P
Sbjct: 17  LQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQA----PLPMAV-----------SRGLPP 61

Query: 129 EQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPG--------SGGRPETSHQPQIWV 180
           +QP    PL+   G   A ++    L+R     QL G        S G    S  P    
Sbjct: 62  QQPQ--QPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLA 119

Query: 181 KPGVVQTKGGRALEDLQSPHADLAQREER----SEAEPETQKRKLTPGTPGPGDLPSQNL 236
            P + Q       + L  P              S   P+ Q R  +  TP   D  SQ +
Sbjct: 120 TPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTM 179

Query: 237 PSQDALEGLGSDPHLGQERAELQRPPRMDTPESE 270
           P +D      SDP  G E A     PRMDTPE +
Sbjct: 180 PVEDK-----SDPPEGSEEAA---EPRMDTPEDQ 205


>gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
           sapiens]
          Length = 783

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 56/209 (26%), Positives = 80/209 (38%), Gaps = 32/209 (15%)

Query: 99  PQAQFFGPRGQAQQAWSQCCQPGGSTGGDPE------QPSCPVPLITP-----PGLLVAP 147
           P+  F  P G  Q+  +    P   T  DPE      +P  P P+  P     P     P
Sbjct: 78  PKPPFLKPTGAGQRFGT----PASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPP 133

Query: 148 MVAPQPLERLTSKLQL----PGSGGRPETSHQPQIWVKPGVVQTKGG--RALEDLQS--- 198
              P  L  +     L    P SG  P TS   Q    P +   KG    A +DL+    
Sbjct: 134 GNKPS-LHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPL 192

Query: 199 -PHADLAQR-----EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLG 252
            P     Q+     E   E E   +    + G+P P  + S++ P + A E   +  H G
Sbjct: 193 FPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAG 252

Query: 253 QERAELQRPPRMDTPESERGGPSGSESGD 281
            E + L  P  +  P + RGGP  S++G+
Sbjct: 253 -EISSLPFPGVVLKPAASRGGPGLSKNGE 280


>gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo
           sapiens]
          Length = 829

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 56/209 (26%), Positives = 80/209 (38%), Gaps = 32/209 (15%)

Query: 99  PQAQFFGPRGQAQQAWSQCCQPGGSTGGDPE------QPSCPVPLITP-----PGLLVAP 147
           P+  F  P G  Q+  +    P   T  DPE      +P  P P+  P     P     P
Sbjct: 78  PKPPFLKPTGAGQRFGT----PASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPP 133

Query: 148 MVAPQPLERLTSKLQL----PGSGGRPETSHQPQIWVKPGVVQTKGG--RALEDLQS--- 198
              P  L  +     L    P SG  P TS   Q    P +   KG    A +DL+    
Sbjct: 134 GNKPS-LHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPL 192

Query: 199 -PHADLAQR-----EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLG 252
            P     Q+     E   E E   +    + G+P P  + S++ P + A E   +  H G
Sbjct: 193 FPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAG 252

Query: 253 QERAELQRPPRMDTPESERGGPSGSESGD 281
            E + L  P  +  P + RGGP  S++G+
Sbjct: 253 -EISSLPFPGVVLKPAASRGGPGLSKNGE 280


>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
          Length = 1142

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 14/169 (8%)

Query: 119 QPGGSTG-GDPEQPSCPVPLITPPGLLVAPMVAPQPLERLTSKLQLPGSGGRPE-TSHQP 176
           +PGG+ G   PE  S         G   + MV+P   +      +  GS   PE  + Q 
Sbjct: 3   EPGGAAGRSHPEDGSASEG--EKEGNNESHMVSPPEKDDGQKGEEAVGSTEHPEEVTTQA 60

Query: 177 QIWVKPGVVQTKGGRALEDLQSP--HADLAQREERSEAEPETQKRKLTPG-TPGPGDLPS 233
           +  ++ G V+T+G  A+E  +    + D    EE    E  + + +++   T  P   P 
Sbjct: 61  EAAIEEGEVETEGEAAVEGEEEAVSYGDAESEEEYYYTETSSPEGQISAADTTYPYFSPP 120

Query: 234 QNLPSQDALEGLGSDPHLGQERAELQRPP-----RMDTPESERG--GPS 275
           Q LP ++A + +  +  L   + E   PP     R+ +PE   G  GPS
Sbjct: 121 QELPGEEAYDSVSGEAGLQGFQQEATGPPESRERRVTSPEPSHGVLGPS 169


>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
          Length = 717

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]
          Length = 610

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)

Query: 101 AQFFGPRGQAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP-- 153
           +Q    +G+  QA  Q   P G  G     G    P  P P+  PPGL   P     P  
Sbjct: 203 SQIIALKGEQSQASIQ--GPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGI 259

Query: 154 --LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQR 206
                   +  +PG  G+      P I V     +PG+  TKG +  E        L Q+
Sbjct: 260 QGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 319

Query: 207 EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDT 266
            E+ +A       +   G PGP  LP    P  +A    G D  +G       +  R   
Sbjct: 320 GEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAA 372

Query: 267 PESERGGPSGSESGDP 282
            E    GP GS+ G+P
Sbjct: 373 GEQGPDGPKGSK-GEP 387


>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
          Length = 657

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)

Query: 101 AQFFGPRGQAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP-- 153
           +Q    +G+  QA  Q   P G  G     G    P  P P+  PPGL   P     P  
Sbjct: 194 SQIIALKGEQSQASIQ--GPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGI 250

Query: 154 --LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQR 206
                   +  +PG  G+      P I V     +PG+  TKG +  E        L Q+
Sbjct: 251 QGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 310

Query: 207 EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDT 266
            E+ +A       +   G PGP  LP    P  +A    G D  +G       +  R   
Sbjct: 311 GEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAA 363

Query: 267 PESERGGPSGSESGDP 282
            E    GP GS+ G+P
Sbjct: 364 GEQGPDGPKGSK-GEP 378


>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
          Length = 660

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 203 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 261

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 262 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 321

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 322 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 374

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 375 KGSK-GEP 381


>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
          Length = 668

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)

Query: 101 AQFFGPRGQAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP-- 153
           +Q    +G+  QA  Q   P G  G     G    P  P P+  PPGL   P     P  
Sbjct: 232 SQIIALKGEQSQASIQ--GPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGI 288

Query: 154 --LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQR 206
                   +  +PG  G+      P I V     +PG+  TKG +  E        L Q+
Sbjct: 289 QGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 348

Query: 207 EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDT 266
            E+ +A       +   G PGP  LP    P  +A    G D  +G       +  R   
Sbjct: 349 GEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAA 401

Query: 267 PESERGGPSGSESGDP 282
            E    GP GS+ G+P
Sbjct: 402 GEQGPDGPKGSK-GEP 416


>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
          Length = 690

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
          Length = 691

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
          Length = 686

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 241 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 299

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 300 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 359

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 360 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 412

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 413 KGSK-GEP 419


>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
          Length = 688

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 231 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 289

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 290 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 349

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 350 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 402

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 403 KGSK-GEP 409


>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
          Length = 703

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
          Length = 702

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]
          Length = 695

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 53/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)

Query: 101 AQFFGPRGQAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP-- 153
           +Q    +G+  QA  Q   P G  G     G    P  P P+  PPGL   P     P  
Sbjct: 232 SQIIALKGEQSQASIQ--GPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGI 288

Query: 154 --LERLTSKLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQR 206
                   +  +PG  G+      P I V     +PG+  TKG +  E        L Q+
Sbjct: 289 QGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK 348

Query: 207 EERSEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDT 266
            E+ +A       +   G PGP  LP    P  +A    G D  +G       +  R   
Sbjct: 349 GEKGDAGNSIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAA 401

Query: 267 PESERGGPSGSESGDP 282
            E    GP GS+ G+P
Sbjct: 402 GEQGPDGPKGSK-GEP 416


>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
          Length = 698

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 241 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 299

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 300 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 359

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 360 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 412

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 413 KGSK-GEP 419


>gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]
          Length = 700

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 243 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 301

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 302 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 361

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 362 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 414

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 415 KGSK-GEP 421


>gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens]
          Length = 705

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 248 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 306

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 307 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 366

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 367 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 419

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 420 KGSK-GEP 426


>gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]
          Length = 717

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
          Length = 705

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 23/188 (12%)

Query: 109 QAQQAWSQCCQPGGSTG-----GDPEQPSCPVPLITPPGLLVAPMVAPQP----LERLTS 159
           Q +Q+ +    P G  G     G    P  P P+  PPGL   P     P          
Sbjct: 260 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHGRKG 318

Query: 160 KLQLPGSGGRPETSHQPQIWV-----KPGVVQTKGGRALEDLQSPHADLAQREERSEAEP 214
           +  +PG  G+      P I V     +PG+  TKG +  E        L Q+ E+ +A  
Sbjct: 319 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGN 378

Query: 215 ETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPESERGGP 274
                +   G PGP  LP    P  +A    G D  +G       +  R    E    GP
Sbjct: 379 SIGGGR---GEPGPPGLPGPPGPKGEA----GVDGQVGPPGQPGDKGERGAAGEQGPDGP 431

Query: 275 SGSESGDP 282
            GS+ G+P
Sbjct: 432 KGSK-GEP 438


>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
           [Homo sapiens]
          Length = 898

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 210 SEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPES 269
           S   P+ Q R  +  TP   D  SQ +P +D      SDP  G E A     PRMDTPE 
Sbjct: 177 SGRNPQKQARTSSSTTPNRKDSSSQTMPVEDK-----SDPPEGSEEAA---EPRMDTPED 228

Query: 270 E 270
           +
Sbjct: 229 Q 229


>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
           [Homo sapiens]
          Length = 842

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 210 SEAEPETQKRKLTPGTPGPGDLPSQNLPSQDALEGLGSDPHLGQERAELQRPPRMDTPES 269
           S   P+ Q R  +  TP   D  SQ +P +D      SDP  G E A     PRMDTPE 
Sbjct: 177 SGRNPQKQARTSSSTTPNRKDSSSQTMPVEDK-----SDPPEGSEEAA---EPRMDTPED 228

Query: 270 E 270
           +
Sbjct: 229 Q 229


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.135    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,711,683
Number of Sequences: 37866
Number of extensions: 1064111
Number of successful extensions: 3990
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 3748
Number of HSP's gapped (non-prelim): 593
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.