Guide to the Human Genome
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Name: ERF Sequence: fasta or formatted (548aa) NCBI GI: 156104872
Description:

Ets2 repressor factor

Referenced in:

Ets Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         40           2
 C cysteine            1.1          6           1
 D aspartate           4.6         25           1
 E glutamate           6.8         37           2
 F phenylalanine       4.0         22           1
 G glycine            10.6         58           4
 H histidine           2.0         11           1
 I isoleucine          1.6          9           1
 K lysine              4.7         26           2
 L leucine             7.8         43           2
 M methionine          1.3          7           1
 N asparagine          1.1          6           1
 P proline            15.1         83           6
 Q glutamine           3.1         17           1
 R arginine            6.4         35           2
 S serine             10.6         58           9
 T threonine           3.1         17           1
 V valine              4.9         27           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.9         16           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ets2 repressor factor 
ETV3                  0.328   ets variant gene 3 isoform 1 
LOC390937             0.210   PREDICTED: similar to hCG2040171 
LOC390937             0.210   PREDICTED: similar to hCG2040171 
LOC390937             0.210   PREDICTED: similar to hCG2040171 
ETV3L                 0.186   ets variant 3-like 
ETV3                  0.173   ets variant gene 3 isoform 2 
ERG                   0.092   ets-related isoform 4 
ERG                   0.092   ets-related isoform 2 
ERG                   0.092   ets-related isoform 1 
ERG                   0.092   ets-related isoform 3 
FEV                   0.092   FEV (ETS oncogene family) 
FLI1                  0.091   Friend leukemia virus integration 1 
ETS1                  0.082   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.082   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.082   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS2                  0.081   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
GABPA                 0.074   GA binding protein transcription factor, alpha subun...
ELK1                  0.071   ELK1 protein 
ELK1                  0.071   ELK1 protein 
ELK4                  0.071   ELK4 protein isoform b 
ELK4                  0.071   ELK4 protein isoform a 
ETV2                  0.067   ets variant gene 2 
ELK3                  0.064   ELK3 protein 
ETV4                  0.063   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.063   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV1                  0.062   ets variant gene 1 isoform f 
ETV1                  0.062   ets variant gene 1 isoform e 
ETV1                  0.062   ets variant gene 1 isoform d 
ETV1                  0.062   ets variant gene 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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