Guide to the Human Genome
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Name: FAM159A Sequence: fasta or formatted (190aa) NCBI GI: 111548662
Description:

hypothetical protein LOC348378

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         16           3
 C cysteine            6.3         12           2
 D aspartate           3.7          7           2
 E glutamate           5.8         11           2
 F phenylalanine       4.2          8           2
 G glycine             7.4         14           2
 H histidine           3.2          6           2
 I isoleucine          2.6          5           1
 K lysine              2.6          5           1
 L leucine             8.9         17           2
 M methionine          2.1          4           1
 N asparagine          2.6          5           1
 P proline             8.4         16           1
 Q glutamine           3.7          7           2
 R arginine            2.1          4           1
 S serine             10.5         20           2
 T threonine           4.2          8           2
 V valine              8.9         17           2
 W tryptophan          1.1          2           2
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC348378 
FAM159B               0.301   PREDICTED: hypothetical protein LOC100132916 
FAM159B               0.301   PREDICTED: hypothetical protein LOC100132916 
FAM159B               0.298   PREDICTED: hypothetical protein LOC100132916 
SHISA4                0.027   shisa homolog 4 
SHISA3                0.021   shisa homolog 3 
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform beta1 pr...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform alpha1 p...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform beta5 pr...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform beta2 pr...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform alpha3 p...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform beta3 pr...
MOG                   0.019   myelin oligodendrocyte glycoprotein isoform alpha2 p...
PRIMA1                0.019   proline rich membrane anchor 1 precursor 
FAM22E                0.016   PREDICTED: hypothetical protein 
FAM22B                0.016   PREDICTED: hypothetical protein isoform 1 
FAM22A                0.016   hypothetical protein LOC728118 
KIAA1644              0.013   hypothetical protein LOC85352 
HLA-B                 0.013   major histocompatibility complex, class I, B precurs...
SHISA2                0.013   shisa homolog 2 
SHISA5                0.011   scotin 
RAI1                  0.011   retinoic acid induced 1 
ANO4                  0.008   anoctamin 4 
FLJ45455              0.008   hypothetical protein LOC388336 
FAM22F                0.008   hypothetical protein LOC54754 
ZNF467                0.008   zinc finger protein 467 
PET112L               0.008   PET112-like 
C17orf82              0.008   hypothetical protein LOC388407 
LOC729956             0.005   hypothetical protein LOC729956 
CREBBP                0.005   CREB binding protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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