Guide to the Human Genome
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Search of human proteins with 169166778

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
         (315 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]          631   0.0  
gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]          631   0.0  
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]          629   0.0  
gi|30061565 La ribonucleoprotein domain family member 2 isoform ...   157   2e-38
gi|30061569 La ribonucleoprotein domain family member 2 isoform ...   157   2e-38
gi|30061567 La ribonucleoprotein domain family member 2 isoform ...   157   2e-38
gi|61102725 la related protein isoform 2 [Homo sapiens]               100   2e-21
gi|39725634 la related protein isoform 1 [Homo sapiens]               100   2e-21
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]             54   2e-07
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]             54   2e-07
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]             54   2e-07
gi|62241003 cardiomyopathy associated 5 [Homo sapiens]                 40   0.004
gi|37537710 La ribonucleoprotein domain family, member 6 isoform...    39   0.006
gi|157785645 SPEG complex locus [Homo sapiens]                         39   0.006
gi|41281612 zinc finger protein 828 [Homo sapiens]                     39   0.008
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    38   0.010
gi|10835067 autoantigen La [Homo sapiens]                              38   0.013
gi|150170670 piccolo isoform 2 [Homo sapiens]                          36   0.039
gi|150378539 piccolo isoform 1 [Homo sapiens]                          36   0.039
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   35   0.087
gi|189181722 proteoglycan 4 isoform C [Homo sapiens]                   35   0.087
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   35   0.087
gi|67190163 proteoglycan 4 isoform A [Homo sapiens]                    35   0.087
gi|157738619 smoothelin-like 1 [Homo sapiens]                          35   0.087
gi|56549696 E1A binding protein p400 [Homo sapiens]                    35   0.11 
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap...    34   0.15 
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap...    34   0.15 
gi|33286446 opioid growth factor receptor [Homo sapiens]               33   0.25 
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    33   0.25 
gi|209862789 microtubule associated monoxygenase, calponin and L...    33   0.25 

>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  631 bits (1627), Expect = 0.0
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
           MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60

Query: 61  EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
           EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61  EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120

Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
           TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180

Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
           QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240

Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
           DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300

Query: 301 QALLHATYHKQTSLN 315
           QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315


>gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  631 bits (1627), Expect = 0.0
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
           MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60

Query: 61  EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
           EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61  EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120

Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
           TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180

Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
           QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240

Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
           DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300

Query: 301 QALLHATYHKQTSLN 315
           QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315


>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  629 bits (1623), Expect = 0.0
 Identities = 314/315 (99%), Positives = 314/315 (99%)

Query: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
           MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1   MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60

Query: 61  EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
           EGARGEPSSLVVPTRSMPQ AVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61  EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120

Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
           TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180

Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
           QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240

Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
           DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300

Query: 301 QALLHATYHKQTSLN 315
           QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315


>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
           [Homo sapiens]
          Length = 522

 Score =  157 bits (396), Expect = 2e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249

Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35


>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
           [Homo sapiens]
          Length = 358

 Score =  157 bits (396), Expect = 2e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249

Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35


>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
           [Homo sapiens]
          Length = 914

 Score =  157 bits (396), Expect = 2e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249

Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score =  100 bits (248), Expect = 2e-21
 Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 2/116 (1%)

Query: 182 GNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERD 241
           G +K    +  R  +   ++ YY+D+ +  ++Y V++ LLK+ IKRQIE+YF+ +N ERD
Sbjct: 364 GYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERD 423

Query: 242 YFLRGKRGEQDSLPIFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKKNQ 295
           +FLR K      LPI LIA F RVQALTT  +LI  ALKDS  VEI++EK+R++ +
Sbjct: 424 FFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREE 479



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 14/190 (7%)

Query: 8   PAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEP 67
           PA   +G   P  V        AR  RP   +P  E  G+     E  +     GA G  
Sbjct: 31  PAPEGKGEPGPNDVRGGEPDGSARRPRPPCAKPHKEGTGQ--QERESPRPLQLPGAEGPA 88

Query: 68  SSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
            S        P A        A AG ++  + P   PK NPW K     +  T  G+  P
Sbjct: 89  ISDGEEGGGEPGAG-GGAAGAAGAGRRDFVEAPP--PKVNPWTKNALPPVLTTVNGQSPP 145

Query: 128 ALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQ 187
                       K+++A   K++K +K  DF D  NW TP E+    ++SV  Q +K   
Sbjct: 146 E------HSAPAKVVRAAVPKQRKGSKVGDFGDAINWPTPGEI---AHKSVQPQSHKPQP 196

Query: 188 DRKEKRREEL 197
            RK   ++++
Sbjct: 197 TRKLPPKKDM 206


>gi|39725634 la related protein isoform 1 [Homo sapiens]
          Length = 1019

 Score =  100 bits (248), Expect = 2e-21
 Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 2/116 (1%)

Query: 182 GNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERD 241
           G +K    +  R  +   ++ YY+D+ +  ++Y V++ LLK+ IKRQIE+YF+ +N ERD
Sbjct: 287 GYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERD 346

Query: 242 YFLRGKRGEQDSLPIFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKKNQ 295
           +FLR K      LPI LIA F RVQALTT  +LI  ALKDS  VEI++EK+R++ +
Sbjct: 347 FFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREE 402



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 32/132 (24%)

Query: 67  PSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQP-PLLLPKGNPWNKKPSQHLSPTTTGRP 125
           P  L     S+  AA P    +   G +EK  P P+L P  NP +  P+           
Sbjct: 29  PGRLPGRKNSVALAAAP---RKEPTGDREKPLPFPVLAPFSNPEHSAPA----------- 74

Query: 126 QPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLSQGNKK 185
                         K+++A   K++K +K  DF D  NW TP E+    ++SV  Q +K 
Sbjct: 75  --------------KVVRAAVPKQRKGSKVGDFGDAINWPTPGEI---AHKSVQPQSHKP 117

Query: 186 PQDRKEKRREEL 197
              RK   ++++
Sbjct: 118 QPTRKLPPKKDM 129


>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
          Length = 724

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
           + Y   D +G     V    LKEC+K+Q+E  F+ EN  +D +L  +      +PI+ +A
Sbjct: 99  LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 158

Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
             + ++ LTT  +LI E L+ S  V++    EK+R  +++
Sbjct: 159 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 198


>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
          Length = 653

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
           + Y   D +G     V    LKEC+K+Q+E  F+ EN  +D +L  +      +PI+ +A
Sbjct: 99  LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 158

Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
             + ++ LTT  +LI E L+ S  V++    EK+R  +++
Sbjct: 159 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 198


>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
          Length = 730

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
           + Y   D +G     V    LKEC+K+Q+E  F+ EN  +D +L  +      +PI+ +A
Sbjct: 105 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 164

Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
             + ++ LTT  +LI E L+ S  V++    EK+R  +++
Sbjct: 165 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 204


>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
          Length = 4069

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 11/139 (7%)

Query: 7    EPAASHRGLEDP-PAVTAERESLLARVNRPAEHQPLAEHEGK--VAAREEKAKATTSEGA 63
            +PA+ H  L D  PA+  E+E   A   + A+ Q       K  +    ++A A  S+  
Sbjct: 1165 KPASPHSVLPDSVPAIKKEQEPTAALTLKAADEQMALSKVRKEEIVPDSQEATAHVSQDQ 1224

Query: 64   RGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEK-------RQPPLLLPKGNPWNKKPSQH 116
            + EP    VP   M  + +PD ++E   G K K             L K  P   KP   
Sbjct: 1225 KMEPQPPNVPESEMKYSVLPDMVDEPKKGVKPKLVLNVTSELEQRKLSKNEPEVIKPYSP 1284

Query: 117  LSPTTTGRPQPALETLEAE 135
            L  T+   P+ AL  ++ E
Sbjct: 1285 LKETSLSGPE-ALSAVKME 1302


>gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1
           [Homo sapiens]
          Length = 491

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)

Query: 217 EEALLKECIKRQIEHYFNAENSERDYFL--RGKRGEQDSLPIFLIAGFQRVQALTTNLIT 274
           +E L+K+ +  QIE YF+ EN E+D FL    +R +   + + L+  F++V+ LT +  T
Sbjct: 89  DEELIKKLVD-QIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRT 147

Query: 275 --EALKDSTEVEIMNEKMRK 292
              ALK S  +E +NE  RK
Sbjct: 148 TAHALKYSVVLE-LNEDHRK 166


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)

Query: 7    EPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGE 66
            +P   +RGL+   + +        R  R     PL     ++ AR  +   + S  +  +
Sbjct: 2117 QPPLENRGLQKSSSFSQGEAEPRGRHRRAGA--PLEIPVARLGARRLQESPSLSALSEAQ 2174

Query: 67   PSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQ 126
            PSS   P  S P+ + P + E +A  P +  QPP   P     +K P     P    +P 
Sbjct: 2175 PSSPARP--SAPKPSTPKSAEPSATTPSDAPQPPAPQP---AQDKAPEPRPEPVRASKPA 2229

Query: 127  P---ALETL 132
            P   AL+TL
Sbjct: 2230 PPPQALQTL 2238



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 49  AAREEKAKATTSEGARGEPSSLVV-----PTRSMPQAAVPDTMEEAAAGP---KEKRQPP 100
           AA   +A+     G + EP +  V      T  +  AAVP T+E+  AGP   K  R+ P
Sbjct: 615 AADPPEARTKAPPGRKREPPAQAVRFLPWATPGLEGAAVPQTLEKNRAGPEAEKRLRRGP 674

Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRP-QPALETLEAEFGS 138
                  PW+++ ++        RP  P LE+ +  + S
Sbjct: 675 EEDGPWGPWDRRGARSQGKGRRARPTSPELESSDDSYVS 713


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 13/154 (8%)

Query: 18  PPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSM 77
           PP+ ++    +LA    P    P A  E + +AR      T+ E  +  PS    P +  
Sbjct: 239 PPSASSPESPVLAASPEPWGPSPAASPESRKSAR-----TTSPEPRKPSPSESPEPWKPF 293

Query: 78  PQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPALETLEAEFG 137
           P  +        A  P   +  P   P+  PW   PS    P    +P P++      + 
Sbjct: 294 PAVSPEPRRPAPAVSPGSWKPGPPGSPR--PWKSNPSASSGPWKPAKPAPSVS--PGPWK 349

Query: 138 SLKIMKAGKLKKKKSNKASDFKDM----ENWRTP 167
            +  +  G  K   S  ++ +K       +W++P
Sbjct: 350 PIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSP 383


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
           sapiens]
          Length = 5537

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAA-VPDTMEEAAAGP 93
           P E  PL+         EE   +   E +R  P    +P   +P+A  +   +EE+   P
Sbjct: 443 PPEESPLSPPP------EESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSP 496

Query: 94  KEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPALET 131
             +  P    P+ +P++      LSP     P PALET
Sbjct: 497 PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALET 534


>gi|10835067 autoantigen La [Homo sapiens]
          Length = 408

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%)

Query: 219 ALLKECIKRQIEHYFNAENSERDYFLRGK-RGEQDSLPIFLIAGFQRVQALTT--NLITE 275
           A L+  I  QIE+YF   N  RD FL+ + + ++  +P+ ++  F R+  LTT  N+I E
Sbjct: 11  AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVE 70

Query: 276 ALKDSTE--VEIMNEKMR 291
           AL  S    +EI  +K +
Sbjct: 71  ALSKSKAELMEISEDKTK 88


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 48/189 (25%), Positives = 75/189 (39%), Gaps = 36/189 (19%)

Query: 18   PPAVTAER---ESLLARVNRPA--EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVV 72
            PP VT ++   ES L +    A  E +PL E E K+   EEK ++   +    E      
Sbjct: 1186 PPMVTTDQKQEESKLEKDKASALQEKKPLPE-EKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244

Query: 73   PTRSMPQA--AVPDTME---------------EAAAGPK---EKRQPPLL---LPKGNPW 109
              + +P+A  + P+  +               E    PK   E +QP      LP G P 
Sbjct: 1245 DKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQ 1304

Query: 110  N-KKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPS 168
            +  K     + T   +PQP       +      ++ GK K +K +  SD    +  ++P 
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQ------VEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358

Query: 169  ELVNTGYQS 177
             L +TGY S
Sbjct: 1359 GLSDTGYSS 1367


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 48/189 (25%), Positives = 75/189 (39%), Gaps = 36/189 (19%)

Query: 18   PPAVTAER---ESLLARVNRPA--EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVV 72
            PP VT ++   ES L +    A  E +PL E E K+   EEK ++   +    E      
Sbjct: 1186 PPMVTTDQKQEESKLEKDKASALQEKKPLPE-EKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244

Query: 73   PTRSMPQA--AVPDTME---------------EAAAGPK---EKRQPPLL---LPKGNPW 109
              + +P+A  + P+  +               E    PK   E +QP      LP G P 
Sbjct: 1245 DKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQ 1304

Query: 110  N-KKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPS 168
            +  K     + T   +PQP       +      ++ GK K +K +  SD    +  ++P 
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQ------VEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358

Query: 169  ELVNTGYQS 177
             L +TGY S
Sbjct: 1359 GLSDTGYSS 1367


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 19  PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
           PA T  +E        PA    +  P    E      ++ A  T  E A   P     PT
Sbjct: 270 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 326

Query: 75  RSMPQAAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
            + P+   P T E A   PKE      ++P    PK  P    P +  +PTTT  P P
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 382



 Score = 32.3 bits (72), Expect = 0.56
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAA-AGP 93
           P E  P    E      EE A  T    A   P     P  + P+   P T +E A   P
Sbjct: 511 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 567

Query: 94  KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
           KE      K   P  L +  P   KKP+ + L+PTTT  P
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 607



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 47  KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPP 100
           KV A+      TT++G          P++   P  + P+   P T++ A   PKE   P 
Sbjct: 192 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 248

Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
               K  P   K     +PTTT  P P
Sbjct: 249 PTTTKSAPTTPKEP---APTTTKEPAP 272



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPK 94
           P +  P    +      EE A  T  E     P     P  + P+AA P+T +E A  P 
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE---PAPTTPKAAAPNTPKEPA--PT 549

Query: 95  EKRQPPLLLPK----GNPWNKKPS--QHLSPTTTGRPQP 127
             ++P    PK      P    P+  +  +PTT   P P
Sbjct: 550 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 588



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 19  PAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMP 78
           PA+T  +E        PA   P       + +     K       +  P++   P  +  
Sbjct: 208 PALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 267

Query: 79  QAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
           +   P T +E A  P   ++P     K  P   K     +PTT  +P P
Sbjct: 268 KEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEP---APTTPKKPAP 311


>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
          Length = 1311

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 19  PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
           PA T  +E        PA    +  P    E      ++ A  T  E A   P     PT
Sbjct: 311 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 367

Query: 75  RSMPQAAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
            + P+   P T E A   PKE      ++P    PK  P    P +  +PTTT  P P
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 423



 Score = 32.3 bits (72), Expect = 0.56
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAA-AGP 93
           P E  P    E      EE A  T    A   P     P  + P+   P T +E A   P
Sbjct: 552 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 608

Query: 94  KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
           KE      K   P  L +  P   KKP+ + L+PTTT  P
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 47  KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPP 100
           KV A+      TT++G          P++   P  + P+   P T++ A   PKE   P 
Sbjct: 233 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 289

Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
               K  P   K     +PTTT  P P
Sbjct: 290 PTTTKSAPTTPKEP---APTTTKEPAP 313



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPK 94
           P +  P    +      EE A  T  E     P     P  + P+AA P+T +E A  P 
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE---PAPTTPKAAAPNTPKEPA--PT 590

Query: 95  EKRQPPLLLPK----GNPWNKKPS--QHLSPTTTGRPQP 127
             ++P    PK      P    P+  +  +PTT   P P
Sbjct: 591 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 629



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 19  PAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMP 78
           PA+T  +E        PA   P       + +     K       +  P++   P  +  
Sbjct: 249 PALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 308

Query: 79  QAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
           +   P T +E A  P   ++P     K  P   K     +PTT  +P P
Sbjct: 309 KEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEP---APTTPKKPAP 352


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 19  PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
           PA T  +E        PA    +  P    E      ++ A  T  E A   P     PT
Sbjct: 363 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 419

Query: 75  RSMPQAAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
            + P+   P T E A   PKE      ++P    PK  P    P +  +PTTT  P P
Sbjct: 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 475



 Score = 32.3 bits (72), Expect = 0.56
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAA-AGP 93
           P E  P    E      EE A  T    A   P     P  + P+   P T +E A   P
Sbjct: 604 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 660

Query: 94  KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
           KE      K   P  L +  P   KKP+ + L+PTTT  P
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 700



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 47  KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPP 100
           KV A+      TT++G          P++   P  + P+   P T++ A   PKE   P 
Sbjct: 285 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 341

Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
               K  P   K     +PTTT  P P
Sbjct: 342 PTTTKSAPTTPKEP---APTTTKEPAP 365



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPK 94
           P +  P    +      EE A  T  E     P     P  + P+AA P+T +E A  P 
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE---PAPTTPKAAAPNTPKEPA--PT 642

Query: 95  EKRQPPLLLPK----GNPWNKKPS--QHLSPTTTGRPQP 127
             ++P    PK      P    P+  +  +PTT   P P
Sbjct: 643 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 681



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 19  PAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMP 78
           PA+T  +E        PA   P       + +     K       +  P++   P  +  
Sbjct: 301 PALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 360

Query: 79  QAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
           +   P T +E A  P   ++P     K  P   K     +PTT  +P P
Sbjct: 361 KEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEP---APTTPKKPAP 404


>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
          Length = 1404

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 19  PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
           PA T  +E        PA    +  P    E      ++ A  T  E A   P     PT
Sbjct: 404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 460

Query: 75  RSMPQAAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
            + P+   P T E A   PKE      ++P    PK  P    P +  +PTTT  P P
Sbjct: 461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 516



 Score = 32.3 bits (72), Expect = 0.56
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAA-AGP 93
           P E  P    E      EE A  T    A   P     P  + P+   P T +E A   P
Sbjct: 645 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 701

Query: 94  KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
           KE      K   P  L +  P   KKP+ + L+PTTT  P
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 47  KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPP 100
           KV A+      TT++G          P++   P  + P+   P T++ A   PKE   P 
Sbjct: 326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 382

Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
               K  P   K     +PTTT  P P
Sbjct: 383 PTTTKSAPTTPKEP---APTTTKEPAP 406



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 35  PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPK 94
           P +  P    +      EE A  T  E     P     P  + P+AA P+T +E A  P 
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE---PAPTTPKAAAPNTPKEPA--PT 683

Query: 95  EKRQPPLLLPK----GNPWNKKPS--QHLSPTTTGRPQP 127
             ++P    PK      P    P+  +  +PTT   P P
Sbjct: 684 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 722



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 19  PAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMP 78
           PA+T  +E        PA   P       + +     K       +  P++   P  +  
Sbjct: 342 PALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 401

Query: 79  QAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
           +   P T +E A  P   ++P     K  P   K     +PTT  +P P
Sbjct: 402 KEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEP---APTTPKKPAP 445


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 5   GQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGAR 64
           GQ+  A+ R   +P A   E ++  A      +         K  + E K KAT  E A+
Sbjct: 167 GQKADANDRDKPEPKATVEEEDAKTASQEETGQR--------KECSTEPKEKATDEE-AK 217

Query: 65  GEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEK 96
            E    VV   +  +   PD  EEA  G KE+
Sbjct: 218 AESQKAVVEDEAKAEPKEPDGKEEAKHGAKEE 249


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 14   GLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSE-------GARGE 66
            GLE+   +T     LL++   P +           AAR   AK   S        G + E
Sbjct: 1380 GLENK--ITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPE 1437

Query: 67   PSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQ 126
              ++  P+   P+ A P T   A  GP   R PP+     NP  K  +     +      
Sbjct: 1438 GRTVAFPSTHPPRTAAPTTASAAPQGPLRGR-PPIATFSANPEAKAAAAPFQTSQASASA 1496

Query: 127  PALETLEAEFGSLKIMKAGKLKKKKSNKAS 156
            P  +   A   +       KL+ + + +AS
Sbjct: 1497 PRHQPASASSTAASPAHPAKLRAQTTAQAS 1526


>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
          Length = 1758

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 46/242 (19%)

Query: 22   TAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAA 81
            +++++  +    R A  +   EH+     +EEK K   S+  + E  +            
Sbjct: 1043 SSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLT------------ 1090

Query: 82   VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQH---------------------LSPT 120
               T EE A  P EK +P  L  KG    +K  +                      + P+
Sbjct: 1091 ---TKEEKAKKPNEKNKP--LDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPS 1145

Query: 121  TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSN-----KASDFKDMENWRTPSELVNTGY 175
               + +P  E ++      KI  +   KK K N     K    +++ N + PSE + +  
Sbjct: 1146 PKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTS 1205

Query: 176  QSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGT--GVQVYRVEEAL-LKECIKRQIEHY 232
              V  +  K    RK    E  +++++ Y    +  G  V + EE    K  + + +E Y
Sbjct: 1206 SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEY 1265

Query: 233  FN 234
             N
Sbjct: 1266 NN 1267



 Score = 32.7 bits (73), Expect = 0.43
 Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 15/187 (8%)

Query: 47   KVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKG 106
            K  A+ +K K      A  +  ++V P +  PQ  V    E +       ++     PK 
Sbjct: 977  KPKAKGDKTKRKNDGSAVSKKENIVKPAKG-PQEKVDGERERSPRSEPPIKKAKEETPKT 1035

Query: 107  NPWNKKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRT 166
            +      S       TG P+ A      E    K +K  K+KK  S      KD++    
Sbjct: 1036 DNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYS------KDVK---- 1085

Query: 167  PSELVNTGYQSVLSQGNK-KPQDRK-EKRREELNTSMMYYYDDGTGVQVYRVE-EALLKE 223
             SE + T  +       K KP D K EKR+ +     +    + + +++ ++E   ++K 
Sbjct: 1086 -SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKP 1144

Query: 224  CIKRQIE 230
              KR++E
Sbjct: 1145 SPKRKME 1151


>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
          Length = 1792

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 46/242 (19%)

Query: 22   TAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAA 81
            +++++  +    R A  +   EH+     +EEK K   S+  + E  +            
Sbjct: 1077 SSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLT------------ 1124

Query: 82   VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQH---------------------LSPT 120
               T EE A  P EK +P  L  KG    +K  +                      + P+
Sbjct: 1125 ---TKEEKAKKPNEKNKP--LDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPS 1179

Query: 121  TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSN-----KASDFKDMENWRTPSELVNTGY 175
               + +P  E ++      KI  +   KK K N     K    +++ N + PSE + +  
Sbjct: 1180 PKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTS 1239

Query: 176  QSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGT--GVQVYRVEEAL-LKECIKRQIEHY 232
              V  +  K    RK    E  +++++ Y    +  G  V + EE    K  + + +E Y
Sbjct: 1240 SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEY 1299

Query: 233  FN 234
             N
Sbjct: 1300 NN 1301



 Score = 32.7 bits (73), Expect = 0.43
 Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 15/187 (8%)

Query: 47   KVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKG 106
            K  A+ +K K      A  +  ++V P +  PQ  V    E +       ++     PK 
Sbjct: 1011 KPKAKGDKTKRKNDGSAVSKKENIVKPAKG-PQEKVDGERERSPRSEPPIKKAKEETPKT 1069

Query: 107  NPWNKKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRT 166
            +      S       TG P+ A      E    K +K  K+KK  S      KD++    
Sbjct: 1070 DNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYS------KDVK---- 1119

Query: 167  PSELVNTGYQSVLSQGNK-KPQDRK-EKRREELNTSMMYYYDDGTGVQVYRVE-EALLKE 223
             SE + T  +       K KP D K EKR+ +     +    + + +++ ++E   ++K 
Sbjct: 1120 -SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKP 1178

Query: 224  CIKRQIE 230
              KR++E
Sbjct: 1179 SPKRKME 1185


>gi|33286446 opioid growth factor receptor [Homo sapiens]
          Length = 677

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 14  GLEDPPAVTAERESLLARVNRPAEH-QPLAEHEGKVAAREEKAKATTSEGARGEPSSLVV 72
           G  D  AV +     LA    PA    P A H       + + +    EG  G PS    
Sbjct: 464 GAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPG 523

Query: 73  PTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPA 128
           P+ + P    P        GP+         P G P   +P++  SP+ T  P+PA
Sbjct: 524 PSPAGPAGDEPAESPSETPGPR---------PAG-PAGDEPAE--SPSETPGPRPA 567


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 13/150 (8%)

Query: 20  AVTAERESLLARVNRPAEHQPLAEHEGKV----AAREEKAKATTSEGARGEPSSLV---V 72
           A T  + +  A ++ PA+  P    +       ++ EE+ + T+    + +P  +     
Sbjct: 443 ATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAA 502

Query: 73  PTR-SMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPALET 131
           P++ +  +    ++   +++    + +   L  KG+P  + P  + +   T +   A + 
Sbjct: 503 PSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKN 562

Query: 132 LEAEFGSLK-----IMKAGKLKKKKSNKAS 156
            E E    K     + K+G LKK+K N+A+
Sbjct: 563 SEEEEEEKKKAAVVVSKSGSLKKRKQNEAA 592


>gi|209862789 microtubule associated monoxygenase, calponin and LIM
            domain containing 3 isoform 1 [Homo sapiens]
          Length = 2002

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 26/123 (21%)

Query: 23   AERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQAA- 81
            A+RE    R+  PAE +  AE E +V+  EEK  A+     RG PS    P RS  ++A 
Sbjct: 1113 ADRE---LRLPCPAEGE--AELELRVSEDEEKLPASPKHQERG-PSQATSPIRSPQESAL 1166

Query: 82   -----------------VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGR 124
                             VP   +E +  P+E+  P  LLPK  P    PS   +  +  R
Sbjct: 1167 LFIPVHSPSTEGPQLPPVPAATQEKS--PEERLFPEPLLPKEKPKADAPSDLKAVHSPIR 1224

Query: 125  PQP 127
             QP
Sbjct: 1225 SQP 1227


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,012,100
Number of Sequences: 37866
Number of extensions: 648374
Number of successful extensions: 2708
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 2580
Number of HSP's gapped (non-prelim): 271
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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