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Search of human proteins with 169166363
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
(315 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens] 631 0.0
gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens] 629 0.0
gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens] 629 0.0
gi|30061565 La ribonucleoprotein domain family member 2 isoform ... 157 2e-38
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 157 2e-38
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 157 2e-38
gi|61102725 la related protein isoform 2 [Homo sapiens] 100 2e-21
gi|39725634 la related protein isoform 1 [Homo sapiens] 100 2e-21
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens] 54 2e-07
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens] 54 2e-07
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens] 54 2e-07
gi|41281612 zinc finger protein 828 [Homo sapiens] 40 0.003
gi|37537710 La ribonucleoprotein domain family, member 6 isoform... 39 0.006
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 39 0.008
gi|157785645 SPEG complex locus [Homo sapiens] 39 0.008
gi|10835067 autoantigen La [Homo sapiens] 38 0.013
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.023
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.023
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.030
gi|117190342 PHD finger protein 2 [Homo sapiens] 35 0.066
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 35 0.11
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 35 0.11
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 35 0.11
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 35 0.11
gi|56549696 E1A binding protein p400 [Homo sapiens] 35 0.11
gi|157738619 smoothelin-like 1 [Homo sapiens] 35 0.11
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 34 0.15
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 34 0.15
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens] 33 0.33
gi|169177938 PREDICTED: similar to chromosome 9 open reading fra... 33 0.33
>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 631 bits (1627), Expect = 0.0
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
Query: 61 EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61 EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
Query: 301 QALLHATYHKQTSLN 315
QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315
>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 629 bits (1623), Expect = 0.0
Identities = 314/315 (99%), Positives = 314/315 (99%)
Query: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
Query: 61 EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
EGARGEPSSLVVPTRSMPQ AVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61 EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
Query: 301 QALLHATYHKQTSLN 315
QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315
>gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 629 bits (1623), Expect = 0.0
Identities = 314/315 (99%), Positives = 314/315 (99%)
Query: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS
Sbjct: 1 MGVGGQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTS 60
Query: 61 EGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
EGARGEPSSLVVPTRSMPQ AVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT
Sbjct: 61 EGARGEPSSLVVPTRSMPQAAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPT 120
Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS
Sbjct: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLS 180
Query: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER
Sbjct: 181 QGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSER 240
Query: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF
Sbjct: 241 DYFLRGKRGEQDSLPIFLIAGFQRVQALTTNLITEALKDSTEVEIMNEKMRKKNQKNGQF 300
Query: 301 QALLHATYHKQTSLN 315
QALLHATYHKQTSLN
Sbjct: 301 QALLHATYHKQTSLN 315
>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
[Homo sapiens]
Length = 522
Score = 157 bits (396), Expect = 2e-38
Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)
Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK EQ LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
I LIAGFQRVQALTT NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Score = 64.7 bits (156), Expect = 1e-10
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK +
Sbjct: 1 MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 157 bits (396), Expect = 2e-38
Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)
Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK EQ LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
I LIAGFQRVQALTT NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Score = 64.7 bits (156), Expect = 1e-10
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK +
Sbjct: 1 MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 157 bits (396), Expect = 2e-38
Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)
Query: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255
ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK EQ LP
Sbjct: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
Query: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293
I LIAGFQRVQALTT NLI EALKDSTEVEI++EKMRKK
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Score = 64.7 bits (156), Expect = 1e-10
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195
MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK +
Sbjct: 1 MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 100 bits (248), Expect = 2e-21
Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 182 GNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERD 241
G +K + R + ++ YY+D+ + ++Y V++ LLK+ IKRQIE+YF+ +N ERD
Sbjct: 364 GYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERD 423
Query: 242 YFLRGKRGEQDSLPIFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKKNQ 295
+FLR K LPI LIA F RVQALTT +LI ALKDS VEI++EK+R++ +
Sbjct: 424 FFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREE 479
Score = 49.7 bits (117), Expect = 3e-06
Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 14/190 (7%)
Query: 8 PAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEP 67
PA +G P V AR RP +P E G+ E + GA G
Sbjct: 31 PAPEGKGEPGPNDVRGGEPDGSARRPRPPCAKPHKEGTGQ--QERESPRPLQLPGAEGPA 88
Query: 68 SSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
S P A A AG ++ + P PK NPW K + T G+ P
Sbjct: 89 ISDGEEGGGEPG-AGGGAAGAAGAGRRDFVEAPP--PKVNPWTKNALPPVLTTVNGQSPP 145
Query: 128 ALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQ 187
K+++A K++K +K DF D NW TP E+ ++SV Q +K
Sbjct: 146 E------HSAPAKVVRAAVPKQRKGSKVGDFGDAINWPTPGEI---AHKSVQPQSHKPQP 196
Query: 188 DRKEKRREEL 197
RK ++++
Sbjct: 197 TRKLPPKKDM 206
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 100 bits (248), Expect = 2e-21
Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 182 GNKKPQDRKEKRREELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERD 241
G +K + R + ++ YY+D+ + ++Y V++ LLK+ IKRQIE+YF+ +N ERD
Sbjct: 287 GYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERD 346
Query: 242 YFLRGKRGEQDSLPIFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKKNQ 295
+FLR K LPI LIA F RVQALTT +LI ALKDS VEI++EK+R++ +
Sbjct: 347 FFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREE 402
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 80 VAVPDTMEEAAAGPKEKRQP-PLLLPKGNPWNKKPSQHLSPTTTGRPQPALETLEAEFGS 138
VA+ + G +EK P P+L P NP + P+
Sbjct: 39 VALAAAPRKEPTGDREKPLPFPVLAPFSNPEHSAPA------------------------ 74
Query: 139 LKIMKAGKLKKKKSNKASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRREEL 197
K+++A K++K +K DF D NW TP E+ ++SV Q +K RK ++++
Sbjct: 75 -KVVRAAVPKQRKGSKVGDFGDAINWPTPGEI---AHKSVQPQSHKPQPTRKLPPKKDM 129
>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
Length = 724
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 99 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 158
Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 159 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 198
>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
Length = 653
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 99 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 158
Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 159 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 198
>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
Length = 730
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 105 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 164
Query: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 165 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 204
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 18 PPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSM 77
PP+ ++ +LA P P A E + +AR T+ E + PS P +
Sbjct: 239 PPSASSPESPVLAASPEPWGPSPAASPESRKSAR-----TTSPEPRKPSPSESPEPWKPF 293
Query: 78 PQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPALETLEAEFG 137
P V+ A P + P P+ PW PS P +P P++ +
Sbjct: 294 PAVSPEPRRPAPAVSPGSWKPGPPGSPR--PWKSNPSASSGPWKPAKPAPSVS--PGPWK 349
Query: 138 SLKIMKAGKLKKKKSNKASDFKDM----ENWRTP 167
+ + G K S ++ +K +W++P
Sbjct: 350 PIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSP 383
>gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1
[Homo sapiens]
Length = 491
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 217 EEALLKECIKRQIEHYFNAENSERDYFL--RGKRGEQDSLPIFLIAGFQRVQALTTNLIT 274
+E L+K+ + QIE YF+ EN E+D FL +R + + + L+ F++V+ LT + T
Sbjct: 89 DEELIKKLVD-QIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRT 147
Query: 275 --EALKDSTEVEIMNEKMRK 292
ALK S +E +NE RK
Sbjct: 148 TAHALKYSVVLE-LNEDHRK 166
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 38.5 bits (88), Expect = 0.008
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 7 EPAASHRGLEDP-PAVTAERESLLARVNRPAEHQPLAEHEGK--VAAREEKAKATTSEGA 63
+PA+ H L D PA+ E+E A + A+ Q K + ++A A S+
Sbjct: 1165 KPASPHSVLPDSVPAIKKEQEPTAALTLKAADEQMALSKVRKEEIVPDSQEATAHVSQDQ 1224
Query: 64 RGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEK-------RQPPLLLPKGNPWNKKPSQH 116
+ EP VP M +PD ++E G K K L K P KP
Sbjct: 1225 KMEPQPPNVPESEMKYSVLPDMVDEPKKGVKPKLVLNVTSELEQRKLSKNEPEVIKPYSP 1284
Query: 117 LSPTTTGRPQPALETLEAE 135
L T+ P+ AL ++ E
Sbjct: 1285 LKETSLSGPE-ALSAVKME 1302
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 38.5 bits (88), Expect = 0.008
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 7 EPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGE 66
+P +RGL+ + + R R PL ++ AR + + S + +
Sbjct: 2117 QPPLENRGLQKSSSFSQGEAEPRGRHRRAGA--PLEIPVARLGARRLQESPSLSALSEAQ 2174
Query: 67 PSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQ 126
PSS P S P+ + P + E +A P + QPP P +K P P +P
Sbjct: 2175 PSSPARP--SAPKPSTPKSAEPSATTPSDAPQPPAPQP---AQDKAPEPRPEPVRASKPA 2229
Query: 127 P---ALETL 132
P AL+TL
Sbjct: 2230 PPPQALQTL 2238
Score = 32.3 bits (72), Expect = 0.56
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 49 AAREEKAKATTSEGARGEPSSLVV-----PTRSMPQVAVPDTMEEAAAGP---KEKRQPP 100
AA +A+ G + EP + V T + AVP T+E+ AGP K R+ P
Sbjct: 615 AADPPEARTKAPPGRKREPPAQAVRFLPWATPGLEGAAVPQTLEKNRAGPEAEKRLRRGP 674
Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRP-QPALETLEAEFGS 138
PW+++ ++ RP P LE+ + + S
Sbjct: 675 EEDGPWGPWDRRGARSQGKGRRARPTSPELESSDDSYVS 713
>gi|10835067 autoantigen La [Homo sapiens]
Length = 408
Score = 37.7 bits (86), Expect = 0.013
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 219 ALLKECIKRQIEHYFNAENSERDYFLRGK-RGEQDSLPIFLIAGFQRVQALTT--NLITE 275
A L+ I QIE+YF N RD FL+ + + ++ +P+ ++ F R+ LTT N+I E
Sbjct: 11 AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVE 70
Query: 276 ALKDSTE--VEIMNEKMR 291
AL S +EI +K +
Sbjct: 71 ALSKSKAELMEISEDKTK 88
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 37.0 bits (84), Expect = 0.023
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 36/189 (19%)
Query: 18 PPAVTAER---ESLLARVNRPA--EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVV 72
PP VT ++ ES L + A E +PL E E K+ EEK ++ + E
Sbjct: 1186 PPMVTTDQKQEESKLEKDKASALQEKKPLPE-EKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244
Query: 73 PTRSMP-----------------QVAVPDTMEEAAAGPK---EKRQPPLL---LPKGNPW 109
+ +P QV + + E PK E +QP LP G P
Sbjct: 1245 DKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQ 1304
Query: 110 N-KKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPS 168
+ K + T +PQP + ++ GK K +K + SD + ++P
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQ------VEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Query: 169 ELVNTGYQS 177
L +TGY S
Sbjct: 1359 GLSDTGYSS 1367
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 37.0 bits (84), Expect = 0.023
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 36/189 (19%)
Query: 18 PPAVTAER---ESLLARVNRPA--EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVV 72
PP VT ++ ES L + A E +PL E E K+ EEK ++ + E
Sbjct: 1186 PPMVTTDQKQEESKLEKDKASALQEKKPLPE-EKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244
Query: 73 PTRSMP-----------------QVAVPDTMEEAAAGPK---EKRQPPLL---LPKGNPW 109
+ +P QV + + E PK E +QP LP G P
Sbjct: 1245 DKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQ 1304
Query: 110 N-KKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRTPS 168
+ K + T +PQP + ++ GK K +K + SD + ++P
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQ------VEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Query: 169 ELVNTGYQS 177
L +TGY S
Sbjct: 1359 GLSDTGYSS 1367
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 36.6 bits (83), Expect = 0.030
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 35 PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVA-VPDTMEEAAAGP 93
P E PL+ EE + E +R P +P +P+ + +EE+ P
Sbjct: 443 PPEESPLSPPP------EESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSP 496
Query: 94 KEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQPALET 131
+ P P+ +P++ LSP P PALET
Sbjct: 497 PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALET 534
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 35.4 bits (80), Expect = 0.066
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 11 SHR-GLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAR---EEKAKATTSEGARGE 66
SH+ G + PP + + L + Q LAEHE ++ + K E E
Sbjct: 384 SHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHEDELPEHFKPSQLIKDLAKEIRLSE 443
Query: 67 PSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWN--KKPSQHLSPTTTGR 124
+S V P+V + +E G +EK +PP + P + +K S+ +P T
Sbjct: 444 NASKAV----RPEVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKM 499
Query: 125 PQPALETLEAE-------FGSLKIMKAGKLKKKKSNKAS 156
P+P+ + +LK+ GK K KKS +++
Sbjct: 500 PKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRESA 538
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 19 PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
PA T +E PA + P E ++ A T E A P PT
Sbjct: 270 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 326
Query: 75 RSMPQVAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
+ P+ P T E A PKE ++P PK P P + +PTTT P P
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 382
Score = 32.0 bits (71), Expect = 0.73
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 35 PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAA-AGP 93
P E P E EE A T A P P + P+ P T +E A P
Sbjct: 511 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 567
Query: 94 KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
KE K P L + P KKP+ + L+PTTT P
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 607
Score = 29.6 bits (65), Expect = 3.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 47 KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPP 100
KV A+ TT++G P++ P + P+ P T++ A PKE P
Sbjct: 192 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 248
Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
K P K +PTTT P P
Sbjct: 249 PTTTKSAPTTPKEP---APTTTKEPAP 272
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 19 PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
PA T +E PA + P E ++ A T E A P PT
Sbjct: 311 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 367
Query: 75 RSMPQVAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
+ P+ P T E A PKE ++P PK P P + +PTTT P P
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 423
Score = 32.0 bits (71), Expect = 0.73
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 35 PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAA-AGP 93
P E P E EE A T A P P + P+ P T +E A P
Sbjct: 552 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 608
Query: 94 KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
KE K P L + P KKP+ + L+PTTT P
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648
Score = 29.6 bits (65), Expect = 3.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 47 KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPP 100
KV A+ TT++G P++ P + P+ P T++ A PKE P
Sbjct: 233 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 289
Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
K P K +PTTT P P
Sbjct: 290 PTTTKSAPTTPKEP---APTTTKEPAP 313
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 19 PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
PA T +E PA + P E ++ A T E A P PT
Sbjct: 363 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 419
Query: 75 RSMPQVAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
+ P+ P T E A PKE ++P PK P P + +PTTT P P
Sbjct: 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 475
Score = 32.0 bits (71), Expect = 0.73
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 35 PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAA-AGP 93
P E P E EE A T A P P + P+ P T +E A P
Sbjct: 604 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 660
Query: 94 KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
KE K P L + P KKP+ + L+PTTT P
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 700
Score = 29.6 bits (65), Expect = 3.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 47 KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPP 100
KV A+ TT++G P++ P + P+ P T++ A PKE P
Sbjct: 285 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 341
Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
K P K +PTTT P P
Sbjct: 342 PTTTKSAPTTPKEP---APTTTKEPAP 365
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 19 PAVTAERESLLARVNRPA----EHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPT 74
PA T +E PA + P E ++ A T E A P PT
Sbjct: 404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---PT 460
Query: 75 RSMPQVAVPDTMEEAAAGPKE-----KRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQP 127
+ P+ P T E A PKE ++P PK P P + +PTTT P P
Sbjct: 461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK-EPAPTTPKEP-APTTTKEPSP 516
Score = 32.0 bits (71), Expect = 0.73
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 35 PAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAA-AGP 93
P E P E EE A T A P P + P+ P T +E A P
Sbjct: 645 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTPKEPAPTTPKEPAPTTP 701
Query: 94 KE------KRQPPLLLPKGNPWN-KKPS-QHLSPTTTGRP 125
KE K P L + P KKP+ + L+PTTT P
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741
Score = 29.6 bits (65), Expect = 3.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 47 KVAAREEKAKATTSEGA------RGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPP 100
KV A+ TT++G P++ P + P+ P T++ A PKE P
Sbjct: 326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKE---PA 382
Query: 101 LLLPKGNPWNKKPSQHLSPTTTGRPQP 127
K P K +PTTT P P
Sbjct: 383 PTTTKSAPTTPKEP---APTTTKEPAP 406
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 34.7 bits (78), Expect = 0.11
Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 10/150 (6%)
Query: 14 GLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSE-------GARGE 66
GLE+ +T LL++ P + AAR AK S G + E
Sbjct: 1380 GLENK--ITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPE 1437
Query: 67 PSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSPTTTGRPQ 126
++ P+ P+ A P T A GP R PP+ NP K + +
Sbjct: 1438 GRTVAFPSTHPPRTAAPTTASAAPQGPLRGR-PPIATFSANPEAKAAAAPFQTSQASASA 1496
Query: 127 PALETLEAEFGSLKIMKAGKLKKKKSNKAS 156
P + A + KL+ + + +AS
Sbjct: 1497 PRHQPASASSTAASPAHPAKLRAQTTAQAS 1526
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 5 GQEPAASHRGLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGAR 64
GQ+ A+ R +P A E ++ A + K + E K KAT E A+
Sbjct: 167 GQKADANDRDKPEPKATVEEEDAKTASQEETGQR--------KECSTEPKEKATDEE-AK 217
Query: 65 GEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEK 96
E VV + + PD EEA G KE+
Sbjct: 218 AESQKAVVEDEAKAEPKEPDGKEEAKHGAKEE 249
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 34.3 bits (77), Expect = 0.15
Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 46/242 (19%)
Query: 22 TAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVA 81
+++++ + R A + EH+ +EEK K S+ + E +
Sbjct: 1043 SSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLT------------ 1090
Query: 82 VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQH---------------------LSPT 120
T EE A P EK +P L KG +K + + P+
Sbjct: 1091 ---TKEEKAKKPNEKNKP--LDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPS 1145
Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSN-----KASDFKDMENWRTPSELVNTGY 175
+ +P E ++ KI + KK K N K +++ N + PSE + +
Sbjct: 1146 PKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTS 1205
Query: 176 QSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGT--GVQVYRVEEAL-LKECIKRQIEHY 232
V + K RK E +++++ Y + G V + EE K + + +E Y
Sbjct: 1206 SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEY 1265
Query: 233 FN 234
N
Sbjct: 1266 NN 1267
Score = 32.3 bits (72), Expect = 0.56
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 15/187 (8%)
Query: 47 KVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKG 106
K A+ +K K A + ++V P + PQ V E + ++ PK
Sbjct: 977 KPKAKGDKTKRKNDGSAVSKKENIVKPAKG-PQEKVDGERERSPRSEPPIKKAKEETPKT 1035
Query: 107 NPWNKKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRT 166
+ S TG P+ A E K +K K+KK S KD++
Sbjct: 1036 DNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYS------KDVK---- 1085
Query: 167 PSELVNTGYQSVLSQGNK-KPQDRK-EKRREELNTSMMYYYDDGTGVQVYRVE-EALLKE 223
SE + T + K KP D K EKR+ + + + + +++ ++E ++K
Sbjct: 1086 -SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKP 1144
Query: 224 CIKRQIE 230
KR++E
Sbjct: 1145 SPKRKME 1151
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 34.3 bits (77), Expect = 0.15
Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 46/242 (19%)
Query: 22 TAERESLLARVNRPAEHQPLAEHEGKVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVA 81
+++++ + R A + EH+ +EEK K S+ + E +
Sbjct: 1077 SSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLT------------ 1124
Query: 82 VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQH---------------------LSPT 120
T EE A P EK +P L KG +K + + P+
Sbjct: 1125 ---TKEEKAKKPNEKNKP--LDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPS 1179
Query: 121 TTGRPQPALETLEAEFGSLKIMKAGKLKKKKSN-----KASDFKDMENWRTPSELVNTGY 175
+ +P E ++ KI + KK K N K +++ N + PSE + +
Sbjct: 1180 PKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTS 1239
Query: 176 QSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGT--GVQVYRVEEAL-LKECIKRQIEHY 232
V + K RK E +++++ Y + G V + EE K + + +E Y
Sbjct: 1240 SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEY 1299
Query: 233 FN 234
N
Sbjct: 1300 NN 1301
Score = 32.3 bits (72), Expect = 0.56
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 15/187 (8%)
Query: 47 KVAAREEKAKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKRQPPLLLPKG 106
K A+ +K K A + ++V P + PQ V E + ++ PK
Sbjct: 1011 KPKAKGDKTKRKNDGSAVSKKENIVKPAKG-PQEKVDGERERSPRSEPPIKKAKEETPKT 1069
Query: 107 NPWNKKPSQHLSPTTTGRPQPALETLEAEFGSLKIMKAGKLKKKKSNKASDFKDMENWRT 166
+ S TG P+ A E K +K K+KK S KD++
Sbjct: 1070 DNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYS------KDVK---- 1119
Query: 167 PSELVNTGYQSVLSQGNK-KPQDRK-EKRREELNTSMMYYYDDGTGVQVYRVE-EALLKE 223
SE + T + K KP D K EKR+ + + + + +++ ++E ++K
Sbjct: 1120 -SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKP 1178
Query: 224 CIKRQIE 230
KR++E
Sbjct: 1179 SPKRKME 1185
>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.33
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 36/139 (25%)
Query: 2 GVGGQEPAASHR-------GLEDPPAVTAERESLLARVNRPAEHQPLAEHEGKVAAREEK 54
G GG+E + GL+D P + ++ + + +H+P+ A E
Sbjct: 13 GGGGEEERLEEKSEDQDLQGLKDKP-LKFKKVKKDKKEEKEGKHEPVQPSAHHSAEPAEA 71
Query: 55 AKATTSEGARGEPSSLVVPTRSMPQVAVPDTMEEAAAGPKEKR-----QPPL----LLPK 105
KA TSEG+ P AVP EA+A PK++R + P+ LP+
Sbjct: 72 GKAETSEGSGSAP-------------AVP----EASASPKQRRSIIRDRGPMYDDPTLPE 114
Query: 106 GNPWNKKPSQHLSPTTTGR 124
G W +K Q S + G+
Sbjct: 115 G--WTRKLKQRKSGRSAGK 131
>gi|169177938 PREDICTED: similar to chromosome 9 open reading frame
147 [Homo sapiens]
Length = 208
Score = 33.1 bits (74), Expect = 0.33
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 23 AERESLLARVNRPAEHQPLAEHEGKVAAREEKAKA-TTSEGARGEPSSLVVPTRSMPQVA 81
A R LA + P E + H + E K TT AR E + + P R P +
Sbjct: 59 AARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSL- 117
Query: 82 VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSP 119
+P T AAAG ++ + P+ + P Q +P
Sbjct: 118 LPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNP 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,986,886
Number of Sequences: 37866
Number of extensions: 646238
Number of successful extensions: 2539
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 2430
Number of HSP's gapped (non-prelim): 246
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.