Guide to the Human Genome
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Name: LOC100134071 Sequence: fasta or formatted (156aa) NCBI GI: 169163721
Description:

PREDICTED: similar to EID2 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         16           2
 C cysteine            4.5          7           1
 D aspartate           2.6          4           1
 E glutamate           9.0         14           2
 F phenylalanine       1.9          3           1
 G glycine             5.8          9           1
 H histidine           0.6          1           1
 I isoleucine          5.1          8           1
 K lysine              0.6          1           1
 L leucine            12.8         20           1
 M methionine          1.9          3           1
 N asparagine          3.8          6           1
 P proline             5.1          8           1
 Q glutamine           4.5          7           2
 R arginine            7.1         11           3
 S serine              7.7         12           2
 T threonine           9.6         15           2
 V valine              4.5          7           2
 W tryptophan          1.3          2           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to EID2 protein 
LOC100290310          0.667   PREDICTED: hypothetical protein XP_002348293 
LOC100287218          0.653   PREDICTED: hypothetical protein XP_002342306 
EID2                  0.354   CREBBP/EP300 inhibitor 2 
EID2B                 0.090   EP300 interacting inhibitor of differentiation 2B [H...
EID1                  0.028   CREBBP/EP300 inhibitor 1 
DHRS13                0.024   dehydrogenase/reductase (SDR family) member 13 [Hom...
CP110                 0.021   CP110 protein 
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
DBNL                  0.010   drebrin-like isoform c 
GOLM1                 0.010   golgi membrane protein 1 
GOLM1                 0.010   golgi membrane protein 1 
LOC100293491          0.010   PREDICTED: similar to golgi membrane protein 1 [Hom...
LOC440829             0.007   PREDICTED: transmembrane protein 46-like 
LOC440829             0.007   PREDICTED: transmembrane protein 46-like 
MYO18A                0.007   myosin 18A isoform b 
MYO18A                0.007   myosin 18A isoform a 
USP36                 0.007   ubiquitin specific peptidase 36 
ATPGD1                0.007   ATP-grasp domain containing 1 
CCDC19                0.007   nasopharyngeal epithelium specific protein 1 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
C12orf39              0.007   spexin 
NAGS                  0.007   N-acetylglutamate synthase 
SLC39A8               0.007   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.007   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.007   solute carrier family 39 (zinc transporter), member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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