LOC388553 20978

Name: LOC388553	Sequence: fasta or formatted (591aa)		NCBI GI: 239751822
Description: PREDICTED: similar to hCG1645909		Not currently referenced in the text
Other entries for this name: alt prot {591aa} PREDICTED: similar to hCG1645909 alt mRNA {591aa} PREDICTED: similar to hCG1645909
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 42 2 C cysteine 2.5 15 1 D aspartate 5.1 30 2 E glutamate 5.9 35 2 F phenylalanine 2.0 12 2 G glycine 5.6 33 2 H histidine 2.4 14 1 I isoleucine 2.4 14 1 K lysine 8.8 52 3 L leucine 10.0 59 3 M methionine 1.2 7 1 N asparagine 2.4 14 1 P proline 9.6 57 2 Q glutamine 6.4 38 2 R arginine 5.2 31 4 S serine 11.7 69 13 T threonine 5.8 34 3 V valine 2.7 16 1 W tryptophan 1.7 10 1 Y tyrosine 1.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1645909 LOC388553 1.000 PREDICTED: similar to hCG1645909 LOC388553 0.998 PREDICTED: similar to hCG1645909 SSRP1 0.022 structure specific recognition protein 1 TNRC18 0.022 trinucleotide repeat containing 18 SOX8 0.021 SRY (sex determining region Y)-box 8 SOX9 0.021 transcription factor SOX9 HMGB3 0.021 high-mobility group box 3 SOX15 0.019 SRY-box 15 LOC729595 0.019 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.019 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.019 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.019 PREDICTED: similar to high mobility group box 3 iso... SOX13 0.019 SRY-box 13 HMGXB4 0.019 high-mobility group protein 2-like 1 LOC646993 0.018 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.018 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.018 PREDICTED: similar to high mobility group box 3 [Ho... ACIN1 0.017 apoptotic chromatin condensation inducer 1 KIAA1462 0.017 hypothetical protein LOC57608 SOX5 0.016 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.016 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.016 SRY (sex determining region Y)-box 5 isoform a [Homo... MLLT1 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithora... HMGB2 0.016 high-mobility group box 2 HMGB2 0.016 high-mobility group box 2 HMGB2 0.016 high-mobility group box 2 SETD1A 0.016 SET domain containing 1A MLLT3 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithor... FAM65A 0.015 hypothetical protein LOC79567 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.