Guide to the Human Genome
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Name: DHRS13 Sequence: fasta or formatted (377aa) NCBI GI: 146231950
Description:

dehydrogenase/reductase (SDR family) member 13

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         48           3
 C cysteine            2.4          9           1
 D aspartate           3.4         13           2
 E glutamate           6.9         26           2
 F phenylalanine       2.7         10           1
 G glycine             7.4         28           2
 H histidine           2.7         10           1
 I isoleucine          2.4          9           1
 K lysine              2.1          8           1
 L leucine            13.8         52           3
 M methionine          1.3          5           1
 N asparagine          3.2         12           2
 P proline             7.7         29           2
 Q glutamine           2.9         11           1
 R arginine            8.5         32           2
 S serine              6.6         25           2
 T threonine           3.4         13           1
 V valine              6.6         25           4
 W tryptophan          1.1          4           1
 Y tyrosine            2.1          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dehydrogenase/reductase (SDR family) member 13 [Hom... 
RDH11                 0.300   retinol dehydrogenase 11 
RDH12                 0.297   retinol dehydrogenase 12 
RDH14                 0.289   retinol dehydrogenase 14 (all-trans and 9-cis) [Homo...
RDH13                 0.285   retinol dehydrogenase 13 isoform 1 
RDH13                 0.207   retinol dehydrogenase 13 isoform 2 
WWOX                  0.189   WW domain-containing oxidoreductase isoform 1 
DHRSX                 0.155   dehydrogenase/reductase (SDR family) X-linked [Homo...
KDSR                  0.051   3-ketodihydrosphingosine reductase precursor 
DHRS7B                0.048   dehydrogenase/reductase (SDR family) member 7B [Homo...
DHRS7                 0.047   dehydrogenase/reductase (SDR family) member 7 
HSD11B1L              0.047   short-chain dehydrogenase/reductase 10 isoform b [Ho...
CBR1                  0.045   carbonyl reductase 1 
DHRS2                 0.045   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.045   dehydrogenase/reductase member 2 isoform 1 
CBR3                  0.044   carbonyl reductase 3 
HSD17B12              0.041   hydroxysteroid (17-beta) dehydrogenase 12 
RDH16                 0.041   retinol dehydrogenase 16 
HSD11B1L              0.040   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HPGD                  0.040   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
HSDL1                 0.040   hydroxysteroid dehydrogenase like 1 isoform a [Homo...
HSD17B6               0.040   hydroxysteroid (17-beta) dehydrogenase 6 
RDH5                  0.038   retinol dehydrogenase 5 (11-cis and 9-cis) 
DHRS1                 0.037   dehydrogenase/reductase (SDR family) member 1 [Homo...
DHRS1                 0.037   dehydrogenase/reductase (SDR family) member 1 
HSD17B14              0.037   dehydrogenase/reductase (SDR family) member 10 [Homo...
HSDL2                 0.037   hydroxysteroid dehydrogenase like 2 
HPGD                  0.036   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform...
SDR9C7                0.036   short chain dehydrogenase/reductase family 9C, membe...
DHRS7C                0.036   dehydrogenase/reductase (SDR family) member 7C [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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