Guide to the Human Genome
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Name: NAGS Sequence: fasta or formatted (534aa) NCBI GI: 23308587
Description:

N-acetylglutamate synthase

Referenced in:

Mitochondria
Urea Cycle, Nitric Oxide, and Polyamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         56           4
 C cysteine            1.9         10           1
 D aspartate           4.7         25           2
 E glutamate           4.5         24           2
 F phenylalanine       3.7         20           2
 G glycine             7.1         38           3
 H histidine           2.4         13           2
 I isoleucine          2.8         15           2
 K lysine              3.7         20           2
 L leucine            11.4         61           2
 M methionine          1.5          8           1
 N asparagine          2.8         15           2
 P proline             7.1         38           3
 Q glutamine           3.9         21           2
 R arginine            7.3         39           3
 S serine              9.9         53           3
 T threonine           3.9         21           1
 V valine              7.1         38           2
 W tryptophan          2.1         11           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylglutamate synthase 
SCAF1                 0.013   SR-related CTD-associated factor 1 
SLC16A10              0.012   solute carrier family 16, member 10 
MECP2                 0.011   methyl CpG binding protein 2 isoform 2 
MECP2                 0.011   methyl CpG binding protein 2 isoform 1 
MAST4                 0.011   microtubule associated serine/threonine kinase fami...
TSC22D2               0.011   TSC22 domain family, member 2 
PSRC1                 0.010   proline/serine-rich coiled-coil 1 isoform a 
PSRC1                 0.010   proline/serine-rich coiled-coil 1 isoform a 
LOC339742             0.010   PREDICTED: hypothetical protein 
LOC100291634          0.010   PREDICTED: hypothetical protein XP_002346062 
LOC100134240          0.010   PREDICTED: hypothetical protein 
LOC100133638          0.010   PREDICTED: hypothetical protein 
LOC100287232          0.010   PREDICTED: hypothetical protein XP_002342816 
LOC339742             0.010   PREDICTED: hypothetical protein 
LOC100287232          0.010   PREDICTED: hypothetical protein 
AGRN                  0.010   agrin 
ZFHX2                 0.010   PREDICTED: zinc finger homeobox 2 
LOC100291698          0.010   PREDICTED: hypothetical protein XP_002346014 
ZFHX2                 0.010   PREDICTED: zinc finger homeobox 2 
LOC100290245          0.010   PREDICTED: hypothetical protein XP_002346901 
ZFHX2                 0.010   PREDICTED: zinc finger homeobox 2 
LOC100287584          0.010   PREDICTED: hypothetical protein XP_002342735 
LOC100287584          0.010   PREDICTED: hypothetical protein 
RICH2                 0.010   Rho GTPase-activating protein RICH2 
IQSEC2                0.010   IQ motif and Sec7 domain 2 isoform1 
SCARF2                0.010   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.010   scavenger receptor class F, member 2 isoform 2 [Homo...
SFPQ                  0.010   splicing factor proline/glutamine rich (polypyrimidin...
LOC100130837          0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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