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Search of human proteins with 169162518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169162518 PREDICTED: hypothetical protein [Homo sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162518 PREDICTED: hypothetical protein [Homo sapiens] 456 e-129
gi|169162027 PREDICTED: hypothetical protein [Homo sapiens] 456 e-129
gi|169161198 PREDICTED: hypothetical protein [Homo sapiens] 456 e-129
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 37 0.010
gi|109452587 family with sequence similarity 98, member B isofor... 37 0.013
gi|38788260 bromodomain PHD finger transcription factor isoform ... 37 0.017
gi|38788274 bromodomain PHD finger transcription factor isoform ... 37 0.017
gi|4503119 cancer/testis antigen 1B [Homo sapiens] 36 0.022
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo... 36 0.022
gi|21281685 cancer/testis antigen 1A [Homo sapiens] 36 0.022
gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo sa... 35 0.049
gi|21264343 scaffold attachment factor B [Homo sapiens] 35 0.049
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 35 0.049
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 35 0.049
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 35 0.049
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 35 0.049
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 35 0.049
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 35 0.063
gi|239757272 PREDICTED: hypothetical protein [Homo sapiens] 35 0.063
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 35 0.063
gi|239751775 PREDICTED: hypothetical protein [Homo sapiens] 35 0.063
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 35 0.063
gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo ... 35 0.063
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 35 0.063
gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo sapiens] 34 0.083
gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo sapiens] 34 0.083
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 33 0.18
>gi|169162518 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 456 bits (1174), Expect = e-129
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL
Sbjct: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
Query: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR
Sbjct: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
Query: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR
Sbjct: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
Query: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL
Sbjct: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
>gi|169162027 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 456 bits (1174), Expect = e-129
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL
Sbjct: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
Query: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR
Sbjct: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
Query: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR
Sbjct: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
Query: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL
Sbjct: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
>gi|169161198 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 456 bits (1174), Expect = e-129
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL
Sbjct: 1 MEGTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASL 60
Query: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR
Sbjct: 61 MGSRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNR 120
Query: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR
Sbjct: 121 AQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGR 180
Query: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL
Sbjct: 181 PEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHSL 216
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 37.4 bits (85), Expect = 0.010
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 111 RLERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQ-NVCDAEGGLFDGGGVQGEGAA 169
+L RG+R + ++R G GRG RGR +Q V + G G +G G
Sbjct: 680 QLHRGLRRRQKELRHHGRGRGRRGGRRGRAVGLEVPLQVGVAHEDLAGLPGLGGRGRGGG 739
Query: 170 AWAGRGAVSGRPEAEVGGVEGSQPGCEHPAGARWSQKRQLV 210
G GAV + +VGGV G G E A ++ LV
Sbjct: 740 TRGGGGAVRALVQQQVGGV-GEGLGAERAAEGPLARVHALV 779
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 37.0 bits (84), Expect = 0.013
Identities = 39/126 (30%), Positives = 43/126 (34%), Gaps = 28/126 (22%)
Query: 70 PAEGCRPERCTPAG-RPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGG 128
P G RP P PP ++ GGR WGG G G RG GG
Sbjct: 306 PDRGGRPNEIEPPPPEMPPWQKRQEGGGGRGGWGGGGGGGG--------------RGGGG 351
Query: 129 GRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGV 188
G G GR G GG GGG G G GRG GR + G
Sbjct: 352 GGG------GR-----GGWGGGGGGWGG--GGGGGGGWGGGGGGGRGGFQGRGDYGGRGG 398
Query: 189 EGSQPG 194
G + G
Sbjct: 399 YGGRGG 404
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 36.6 bits (83), Expect = 0.017
Identities = 29/94 (30%), Positives = 33/94 (35%), Gaps = 9/94 (9%)
Query: 77 ERCTPAGRPPPLREASRDFGG---RHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPC 133
ERC PA PPP S GG RH R + + E + + RG R
Sbjct: 18 ERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSR--- 74
Query: 134 QALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEG 167
R P P A GG GGG G G
Sbjct: 75 ---RKPPPPPPAPPSTSAPGRGGRGGGGGRTGGG 105
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 36.6 bits (83), Expect = 0.017
Identities = 29/94 (30%), Positives = 33/94 (35%), Gaps = 9/94 (9%)
Query: 77 ERCTPAGRPPPLREASRDFGG---RHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPC 133
ERC PA PPP S GG RH R + + E + + RG R
Sbjct: 18 ERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSR--- 74
Query: 134 QALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEG 167
R P P A GG GGG G G
Sbjct: 75 ---RKPPPPPPAPPSTSAPGRGGRGGGGGRTGGG 105
>gi|4503119 cancer/testis antigen 1B [Homo sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.022
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 120 RAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCD-AEGGLFDGGGVQGEGAAAWAGRGAVS 178
+A+ RG GG G G P IP N E G G G +G GAA +G G
Sbjct: 2 QAEGRGTGGSTGDADG-PGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGG-- 58
Query: 179 GRPEAEVGGVEGSQPGCEHPAGARWSQKRQL 209
G P GG GC GAR + R L
Sbjct: 59 GAPRGPHGGAASGLNGCCR-CGARGPESRLL 88
>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
sapiens]
Length = 738
Score = 36.2 bits (82), Expect = 0.022
Identities = 46/145 (31%), Positives = 52/145 (35%), Gaps = 29/145 (20%)
Query: 70 PAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGV----RVNRAQVRG 125
P G RP R AG P L G W RG G RGV R+ RG
Sbjct: 42 PFTGLRPARLWGAG--PALLWG---VGAARRWRSGCRGGGPGASRGVLGLARLLGLWARG 96
Query: 126 EGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEV 185
G R A G P++P A F GG AAAWAG A P A
Sbjct: 97 PGSCRCGAFAGPGAPRLPRAR-----------FPGG----PAAAAWAGDEAWRRGPAAPP 141
Query: 186 GGVEGSQPGCEHPAGARWSQKRQLV 210
G G PA A + R+L+
Sbjct: 142 G-----DKGRLRPAAAGLPEARKLL 161
>gi|21281685 cancer/testis antigen 1A [Homo sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.022
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 120 RAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCD-AEGGLFDGGGVQGEGAAAWAGRGAVS 178
+A+ RG GG G G P IP N E G G G +G GAA +G G
Sbjct: 2 QAEGRGTGGSTGDADG-PGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGG-- 58
Query: 179 GRPEAEVGGVEGSQPGCEHPAGARWSQKRQL 209
G P GG GC GAR + R L
Sbjct: 59 GAPRGPHGGAASGLNGCCR-CGARGPESRLL 88
>gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo
sapiens]
Length = 1067
Score = 35.0 bits (79), Expect = 0.049
Identities = 54/201 (26%), Positives = 77/201 (38%), Gaps = 38/201 (18%)
Query: 19 CAGART--ALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASLMGSRDAKNWPAEGCRP 76
C+ R+ ALPV + +RDH Y G S S G + + EGC
Sbjct: 340 CSEGRSSEALPVVLPDAYSRDHSP-KAYSGGRSS--------SSNGYSRSDRYGEEGCYE 390
Query: 77 ERCTPAGRPPPLREASRD-----FGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRG 131
E GR P R+ +G HH+G G GR E R + A+ GGR
Sbjct: 391 EY---RGRSPDAHSGGRNSSSNSYGQSHHYG----GEGRYEEYRGRSHEAR----SGGRS 439
Query: 132 PCQALRGRPQIPHAGVQNV-----CDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186
RGR ++G + C GG ++ + +G + A G S PEA G
Sbjct: 440 TDAHSRGRSDDAYSGGHDSSSWSDCCGGGGRYE----EYQGRSLDANSGGCS--PEAYSG 493
Query: 187 GVEGSQPGCEHPAGARWSQKR 207
G + S + G + + R
Sbjct: 494 GHDNSSWSDRYGVGGHYEENR 514
>gi|21264343 scaffold attachment factor B [Homo sapiens]
Length = 915
Score = 35.0 bits (79), Expect = 0.049
Identities = 42/174 (24%), Positives = 64/174 (36%), Gaps = 45/174 (25%)
Query: 54 RIAEASLMGSRDAKNWPAEGCRPER------------------CTPAGRPPPLREASRDF 95
R S+MG R+ +++P PER G PPP R D
Sbjct: 765 REGSRSMMGEREGQHYPERHGGPERHGRDSRDGWGGYGSDKRMSEGRGLPPPPRRDWGDH 824
Query: 96 GGRHH---WGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCD 152
G R W G+ G ++R R +GG R ++ G H+G
Sbjct: 825 GRREDDRSWQGTADGG--------MMDRDHKRWQGGER----SMSG-----HSG------ 861
Query: 153 AEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGSQPGCEHPAGARWSQK 206
G + + GG+ G G+ A G P + G G Q P+ AR++++
Sbjct: 862 -PGHMMNRGGMSGRGSFAPGGASRGHPIPHGGMQGGFGGQSRGSRPSDARFTRR 914
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 35.0 bits (79), Expect = 0.049
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 99 HHWGGSKRGSGRR---LERGVRVNRAQVRGEG---------------GGRG-PCQALRGR 139
H GG +RG GRR + GVR +A RG G GGRG P Q+LR
Sbjct: 332 HRAGGCRRGGGRRCGHVRVGVR-EQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 390
Query: 140 PQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVE 189
+ G+Q D GG + G EG A +GR A G P ++ GV+
Sbjct: 391 GRGHGRGIQ-ARDTGGGPRNRG---QEGTHA-SGRHAGEGAPHGKLAGVQ 435
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 35.0 bits (79), Expect = 0.049
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 99 HHWGGSKRGSGRR---LERGVRVNRAQVRGEG---------------GGRG-PCQALRGR 139
H GG +RG GRR + GVR +A RG G GGRG P Q+LR
Sbjct: 189 HRAGGCRRGGGRRCGHVRVGVR-EQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 247
Query: 140 PQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVE 189
+ G+Q D GG + G EG A +GR A G P ++ GV+
Sbjct: 248 GRGHGRGIQ-ARDTGGGPRNRG---QEGTHA-SGRHAGEGAPHGKLAGVQ 292
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 35.0 bits (79), Expect = 0.049
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 99 HHWGGSKRGSGRR---LERGVRVNRAQVRGEG---------------GGRG-PCQALRGR 139
H GG +RG GRR + GVR +A RG G GGRG P Q+LR
Sbjct: 189 HRAGGCRRGGGRRCGHVRVGVR-EQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 247
Query: 140 PQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVE 189
+ G+Q D GG + G EG A +GR A G P ++ GV+
Sbjct: 248 GRGHGRGIQ-ARDTGGGPRNRG---QEGTHA-SGRHAGEGAPHGKLAGVQ 292
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 35.0 bits (79), Expect = 0.049
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
Query: 102 GGSKRGSGRRLERGVR-----------VNRAQVRGEGGGRGPC-QALRGRPQIPHAGVQN 149
GGS G +E+G + V R RG G GRG QA RG
Sbjct: 22 GGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAGRG----------- 70
Query: 150 VCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGSQPGC 195
GG+ G +G G GRG GRP + G+ G GC
Sbjct: 71 -----GGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGC 111
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 35.0 bits (79), Expect = 0.049
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
Query: 102 GGSKRGSGRRLERGVR-----------VNRAQVRGEGGGRGPC-QALRGRPQIPHAGVQN 149
GGS G +E+G + V R RG G GRG QA RG
Sbjct: 22 GGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAGRG----------- 70
Query: 150 VCDAEGGLFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGSQPGC 195
GG+ G +G G GRG GRP + G+ G GC
Sbjct: 71 -----GGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGC 111
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 34.7 bits (78), Expect = 0.063
Identities = 46/157 (29%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 63 SRDAKNWPAEGCRPERCTPAGRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQ 122
SR A + PA R +PA RP EA + G R S GSG E G +
Sbjct: 422 SRRAVSVPASFFRRLAPSPA-RPRHPAEAPNN-GARLSSEVSGSGSGNFGEEGNPQGKED 479
Query: 123 VRGEGG--------------GRGPCQALRGRPQIPHAGVQNVCDAEG-GLFDGGGVQGEG 167
G GG G G Q G+ H+ N C EG G G G G+G
Sbjct: 480 QEGSGGDYMPMNNWGSGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQG 539
Query: 168 A----AAWAGRGAVSGRPEAEVGGVEGSQPGCEHPAG 200
+ + G+G G G G +PG H +G
Sbjct: 540 SGGNQCSRDGQGTAGGH-----GSGGGQRPGGGHGSG 571
>gi|239757272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 34.7 bits (78), Expect = 0.063
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 102 GGSKRGSGRRL-----ERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGG 156
GG SGRRL R + +R ++RG G G C ++P AG +
Sbjct: 136 GGGGGFSGRRLGGSPWPRWLASSRRRIRGTGVPAGFCHLDGPGSRVP-AGAGGGAETAAA 194
Query: 157 LFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGS-QPG 194
GGG+ GEG R V GR E E G G+ PG
Sbjct: 195 S-SGGGITGEG------RSKVRGRVEGEAWGSRGTMSPG 226
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 34.7 bits (78), Expect = 0.063
Identities = 49/159 (30%), Positives = 61/159 (38%), Gaps = 24/159 (15%)
Query: 75 RPERCTPAGRPPPLREASRDF-GGR----HHWGGSKRGSGRRLERGVRVNRAQVR--GEG 127
RP GR P F GGR G+ RGSG+R G+R R + R G G
Sbjct: 106 RPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKRRGWGLRPQRVRSRLAGLG 165
Query: 128 GGRGPCQALRG-------RPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAW----AGRGA 176
RG A RG R + G+ GG GGG +G G A R
Sbjct: 166 APRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGG---GGGSEGGGGGARPSPPRARQP 222
Query: 177 VSGRPEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHS 215
SGRP + GS H A ++ QL +R H+
Sbjct: 223 PSGRPRPRRTRLLGSAE--RHTGRAALARHGQL-SRPHA 258
Score = 31.6 bits (70), Expect = 0.54
Identities = 40/137 (29%), Positives = 46/137 (33%), Gaps = 39/137 (28%)
Query: 58 ASLMGSRDAKNWPAEGCRPE----RCTPAGRPPPLREASRDFGGRH--------HWGGSK 105
A+L G G RP R P+GRP P R RH H S+
Sbjct: 196 AALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR 255
Query: 106 -----------RGSGRRLERGVRVNRAQVRG----EGGGRGPCQALR-GRPQIPHAGVQN 149
RG+ + R R RG +G RG C LR G P P
Sbjct: 256 PHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAP------ 309
Query: 150 VCDAEGGLFDGGGVQGE 166
GGL D G QGE
Sbjct: 310 -----GGLQDCRGRQGE 321
>gi|239751775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 34.7 bits (78), Expect = 0.063
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 102 GGSKRGSGRRL-----ERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGG 156
GG SGRRL R + +R ++RG G G C ++P AG +
Sbjct: 136 GGGGGFSGRRLGGSPWPRWLASSRRRIRGTGVPAGFCHLDGPGSRVP-AGAGGGAETAAA 194
Query: 157 LFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGS-QPG 194
GGG+ GEG R V GR E E G G+ PG
Sbjct: 195 S-SGGGITGEG------RSKVRGRVEGEAWGSRGTMSPG 226
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 34.7 bits (78), Expect = 0.063
Identities = 49/159 (30%), Positives = 61/159 (38%), Gaps = 24/159 (15%)
Query: 75 RPERCTPAGRPPPLREASRDF-GGR----HHWGGSKRGSGRRLERGVRVNRAQVR--GEG 127
RP GR P F GGR G+ RGSG+R G+R R + R G G
Sbjct: 106 RPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLG 165
Query: 128 GGRGPCQALRG-------RPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAW----AGRGA 176
RG A RG R + G+ GG GGG +G G A R
Sbjct: 166 APRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGG---GGGSEGGGGGARPSPPRARQP 222
Query: 177 VSGRPEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHS 215
SGRP + GS H A ++ QL +R H+
Sbjct: 223 PSGRPRPRRTRLLGSAE--RHTGRAALARHGQL-SRPHA 258
Score = 31.6 bits (70), Expect = 0.54
Identities = 40/137 (29%), Positives = 46/137 (33%), Gaps = 39/137 (28%)
Query: 58 ASLMGSRDAKNWPAEGCRPE----RCTPAGRPPPLREASRDFGGRH--------HWGGSK 105
A+L G G RP R P+GRP P R RH H S+
Sbjct: 196 AALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR 255
Query: 106 -----------RGSGRRLERGVRVNRAQVRG----EGGGRGPCQALR-GRPQIPHAGVQN 149
RG+ + R R RG +G RG C LR G P P
Sbjct: 256 PHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAP------ 309
Query: 150 VCDAEGGLFDGGGVQGE 166
GGL D G QGE
Sbjct: 310 -----GGLQDCRGRQGE 321
>gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo
sapiens]
Length = 314
Score = 34.7 bits (78), Expect = 0.063
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 102 GGSKRGSGRRL-----ERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGG 156
GG SGRRL R + +R ++RG G G C ++P AG +
Sbjct: 136 GGGGGFSGRRLGGSPWPRWLASSRRRIRGTGVPAGFCHLDGPGSRVP-AGAGGGAETAAA 194
Query: 157 LFDGGGVQGEGAAAWAGRGAVSGRPEAEVGGVEGS-QPG 194
GGG+ GEG R V GR E E G G+ PG
Sbjct: 195 S-SGGGITGEG------RSKVRGRVEGEAWGSRGTMSPG 226
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 34.7 bits (78), Expect = 0.063
Identities = 49/159 (30%), Positives = 61/159 (38%), Gaps = 24/159 (15%)
Query: 75 RPERCTPAGRPPPLREASRDF-GGR----HHWGGSKRGSGRRLERGVRVNRAQVR--GEG 127
RP GR P F GGR G+ RGSG+R G+R R + R G G
Sbjct: 106 RPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLG 165
Query: 128 GGRGPCQALRG-------RPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAW----AGRGA 176
RG A RG R + G+ GG GGG +G G A R
Sbjct: 166 APRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGG---GGGSEGGGGGARPSPPRARQP 222
Query: 177 VSGRPEAEVGGVEGSQPGCEHPAGARWSQKRQLVARKHS 215
SGRP + GS H A ++ QL +R H+
Sbjct: 223 PSGRPRPRRTRLLGSAE--RHTGRAALARHGQL-SRPHA 258
Score = 31.6 bits (70), Expect = 0.54
Identities = 40/137 (29%), Positives = 46/137 (33%), Gaps = 39/137 (28%)
Query: 58 ASLMGSRDAKNWPAEGCRPE----RCTPAGRPPPLREASRDFGGRH--------HWGGSK 105
A+L G G RP R P+GRP P R RH H S+
Sbjct: 196 AALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR 255
Query: 106 -----------RGSGRRLERGVRVNRAQVRG----EGGGRGPCQALR-GRPQIPHAGVQN 149
RG+ + R R RG +G RG C LR G P P
Sbjct: 256 PHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAP------ 309
Query: 150 VCDAEGGLFDGGGVQGE 166
GGL D G QGE
Sbjct: 310 -----GGLQDCRGRQGE 321
>gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo sapiens]
Length = 180
Score = 34.3 bits (77), Expect = 0.083
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 120 RAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCD-AEGGLFDGGGVQGEGAAAWAG-RGAV 177
+A+ +G GG G G P IP N E G G G +G GAA +G RG
Sbjct: 2 QAEGQGTGGSTGDADG-PGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRG-- 58
Query: 178 SGRPEAEVGGVEGSQPGCEHPAGARWSQKRQL 209
G P GG +Q G P GAR R L
Sbjct: 59 -GAPRGPHGGAASAQDG-RCPCGARRPDSRLL 88
>gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo sapiens]
Length = 210
Score = 34.3 bits (77), Expect = 0.083
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 120 RAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCD-AEGGLFDGGGVQGEGAAAWAG-RGAV 177
+A+ +G GG G G P IP N E G G G +G GAA +G RG
Sbjct: 2 QAEGQGTGGSTGDADG-PGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRG-- 58
Query: 178 SGRPEAEVGGVEGSQPGCEHPAGARWSQKRQL 209
G P GG +Q G P GAR R L
Sbjct: 59 -GAPRGPHGGAASAQDG-RCPCGARRPDSRLL 88
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 33.9 bits (76), Expect = 0.11
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 112 LERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEG---- 167
LERG RA++R G GP + RG Q AG + L +G G
Sbjct: 229 LERG---ERARIRERKGREGPSRPRRGL-QGTAAGRVRADPDDASLSTDKPQRGTGGPLG 284
Query: 168 -AAAWAGRGAVSGRPEAEVGGVEGSQ----------PGC-EHPAGARWSQKRQ 208
AAA AG A + E G G++ P C E G RW Q+R+
Sbjct: 285 PAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRR 337
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 33.9 bits (76), Expect = 0.11
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 112 LERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEG---- 167
LERG RA++R G GP + RG Q AG + L +G G
Sbjct: 229 LERG---ERARIRERKGREGPSRPRRGL-QGTAAGRVRADPDDASLSTDKPQRGTGGPLG 284
Query: 168 -AAAWAGRGAVSGRPEAEVGGVEGSQ----------PGC-EHPAGARWSQKRQ 208
AAA AG A + E G G++ P C E G RW Q+R+
Sbjct: 285 PAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRR 337
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 33.9 bits (76), Expect = 0.11
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 112 LERGVRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEG---- 167
LERG RA++R G GP + RG Q AG + L +G G
Sbjct: 229 LERG---ERARIRERKGREGPSRPRRGL-QGTAAGRVRADPDDASLSTDKPQRGTGGPLG 284
Query: 168 -AAAWAGRGAVSGRPEAEVGGVEGSQ----------PGC-EHPAGARWSQKRQ 208
AAA AG A + E G G++ P C E G RW Q+R+
Sbjct: 285 PAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRR 337
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 33.1 bits (74), Expect = 0.18
Identities = 54/205 (26%), Positives = 75/205 (36%), Gaps = 22/205 (10%)
Query: 3 GTYQTRPCAAARPRALCAGARTALPVRPLENTARDHERFLLYVCGMVSFGLRIAEASLMG 62
G Y R C ++ P AL + AL + PL N+ R V +F ++AS+ G
Sbjct: 214 GEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPP---PVIKRRTFQGEQSQASIQG 270
Query: 63 SRDAKNWPAEG---CRPERCTPAGRP----PPLREASRDFGGRHHWGGSKRGSGRRLERG 115
P P P G P PP + G H GR+ ERG
Sbjct: 271 PPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYH---------GRKGERG 321
Query: 116 VRVNRAQVRGEGGGRGPCQALRGRPQIPHAGVQNVCDAEGGLFDGGGVQGEGAAAWAGRG 175
+ + +G ++G P IP G + AEG G + +G AG
Sbjct: 322 MPGMPGKHGAKGAPGIAVAGMKGEPGIP--GTKGEKGAEGSPGLPGLLGQKGEKGDAGNS 379
Query: 176 AVSGRPEAEVGGVEGSQPGCEHPAG 200
GR E G+ G PG + AG
Sbjct: 380 IGGGRGEPGPPGLPG-PPGPKGEAG 403
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,289,498
Number of Sequences: 37866
Number of extensions: 587804
Number of successful extensions: 2973
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 2771
Number of HSP's gapped (non-prelim): 298
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.