Guide to the Human Genome
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Name: BNIP2 Sequence: fasta or formatted (435aa) NCBI GI: 168480080
Description:

BCL2/adenovirus E1B 19kD interacting protein 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         27           4
 C cysteine            1.1          5           1
 D aspartate           7.8         34           2
 E glutamate           9.4         41           2
 F phenylalanine       3.0         13           1
 G glycine             7.1         31           2
 H histidine           0.9          4           1
 I isoleucine          5.5         24           2
 K lysine              5.1         22           2
 L leucine             9.7         42           2
 M methionine          2.5         11           1
 N asparagine          3.0         13           1
 P proline             8.0         35           5
 Q glutamine           3.0         13           2
 R arginine            6.7         29           2
 S serine              6.7         29           2
 T threonine           3.7         16           2
 V valine              6.0         26           2
 W tryptophan          1.6          7           1
 Y tyrosine            3.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom... 
ATCAY                 0.386   caytaxin 
PRUNE2                0.369   prune homolog 2 
BNIPL                 0.333   BCL2/adenovirus E1B 19kD interacting protein like i...
BNIPL                 0.301   BCL2/adenovirus E1B 19kD interacting protein like i...
ARHGAP1               0.109   Rho GTPase activating protein 1 
LOC553158             0.087   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.087   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.070   Rho GTPase activating protein 8 isoform 1 
GDAP2                 0.036   ganglioside induced differentiation associated protei...
GDAP2                 0.035   ganglioside induced differentiation associated prot...
NCL                   0.010   nucleolin 
PEX14                 0.010   peroxisomal biogenesis factor 14 
FAM71E2               0.009   hypothetical protein LOC284418 
C2orf55               0.009   hypothetical protein LOC343990 
FOXL2                 0.009   forkhead box L2 
TAF4                  0.009   TBP-associated factor 4 
PRDM6                 0.009   PR domain containing 6 
CIC                   0.009   capicua homolog 
LOC729154             0.008   PREDICTED: hypothetical protein 
LOC100291176          0.008   PREDICTED: hypothetical protein XP_002346954 
LOC729154             0.008   PREDICTED: hypothetical protein 
RLBP1                 0.008   retinaldehyde binding protein 1 
SP5                   0.008   Sp5 transcription factor 
NR4A3                 0.008   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.008   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.008   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.008   nuclear receptor subfamily 4, group A, member 3 isof...
RNF219                0.008   ring finger protein 219 
E2F4                  0.008   E2F transcription factor 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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