Guide to the Human Genome
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Name: GDAP2 Sequence: fasta or formatted (496aa) NCBI GI: 207450721
Description:

ganglioside induced differentiation associated protein 2 isoform b

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Additional Genes in Development

Other entries for this name:
alt prot [497aa] ganglioside induced differentiation associated protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         30           2
 C cysteine            1.4          7           1
 D aspartate           6.9         34           1
 E glutamate           6.7         33           3
 F phenylalanine       4.6         23           2
 G glycine             5.2         26           1
 H histidine           2.6         13           2
 I isoleucine          4.6         23           2
 K lysine              6.2         31           2
 L leucine            10.1         50           2
 M methionine          1.6          8           1
 N asparagine          3.8         19           1
 P proline             4.6         23           2
 Q glutamine           3.8         19           1
 R arginine            5.2         26           2
 S serine              8.3         41           2
 T threonine           5.0         25           2
 V valine              8.3         41           3
 W tryptophan          0.8          4           1
 Y tyrosine            4.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ganglioside induced differentiation associated prot... 
GDAP2                 0.973   ganglioside induced differentiation associated protei...
MACROD1               0.100   MACRO domain containing 1 
MACROD2               0.098   MACRO domain containing 2 isoform 1 
ARHGAP1               0.061   Rho GTPase activating protein 1 
LOC553158             0.050   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.050   Rho GTPase activating protein 8 isoform 2 
ATCAY                 0.039   caytaxin 
PRUNE2                0.036   prune homolog 2 
ARHGAP8               0.035   Rho GTPase activating protein 8 isoform 1 
BNIP2                 0.031   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom...
H2AFY                 0.031   H2A histone family, member Y isoform 1 
H2AFY                 0.030   H2A histone family, member Y isoform 2 
H2AFY                 0.030   H2A histone family, member Y isoform 2 
H2AFY                 0.030   H2A histone family, member Y isoform 3 
PARP14                0.028   poly (ADP-ribose) polymerase family, member 14 [Hom...
BNIPL                 0.028   BCL2/adenovirus E1B 19kD interacting protein like i...
BNIPL                 0.028   BCL2/adenovirus E1B 19kD interacting protein like i...
H2AFY2                0.024   H2A histone family, member Y2 
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.024   poly (ADP-ribose) polymerase family, member 9 isofo...
NF1                   0.015   neurofibromin isoform 1 
NF1                   0.015   neurofibromin isoform 2 
PARP15                0.014   poly (ADP-ribose) polymerase family, member 15 isof...
RLBP1                 0.008   retinaldehyde binding protein 1 
PHF14                 0.007   PHD finger protein 14 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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