Guide to the Human Genome
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Name: ARHGAP1 Sequence: fasta or formatted (439aa) NCBI GI: 4757766
Description:

Rho GTPase activating protein 1

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         22           2
 C cysteine            0.2          1           1
 D aspartate           7.1         31           2
 E glutamate           5.5         24           2
 F phenylalanine       4.8         21           1
 G glycine             3.0         13           1
 H histidine           3.4         15           2
 I isoleucine          4.8         21           2
 K lysine              6.8         30           2
 L leucine            13.9         61           2
 M methionine          1.6          7           1
 N asparagine          4.1         18           1
 P proline             8.0         35           2
 Q glutamine           5.9         26           2
 R arginine            3.4         15           2
 S serine              6.4         28           3
 T threonine           5.5         24           2
 V valine              5.7         25           2
 W tryptophan          0.9          4           1
 Y tyrosine            4.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 1 
LOC553158             0.499   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.499   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.481   Rho GTPase activating protein 8 isoform 1 
BNIP2                 0.109   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom...
FAM13A                0.105   family with sequence similarity 13, member A1 isofor...
ARHGAP22              0.101   Rho GTPase activating protein 2 
PRUNE2                0.099   prune homolog 2 
MYO9A                 0.096   myosin IXA 
TAGAP                 0.094   T-cell activation Rho GTPase-activating protein isof...
ARHGAP20              0.094   Rho GTPase activating protein 20 
ATCAY                 0.092   caytaxin 
SH3BP1                0.088   SH3-domain binding protein 1 
SRGAP3                0.087   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
BNIPL                 0.086   BCL2/adenovirus E1B 19kD interacting protein like i...
BNIPL                 0.086   BCL2/adenovirus E1B 19kD interacting protein like i...
TAGAP                 0.086   T-cell activation Rho GTPase-activating protein isof...
ARHGAP23              0.084   Rho GTPase activating protein 23 
ARHGAP24              0.084   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.084   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.084   Rho GTPase activating protein 24 isoform 1 
ARHGAP6               0.084   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.084   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.084   Rho GTPase activating protein 6 isoform 1 
ARHGAP17              0.082   nadrin isoform 1 
ARHGAP17              0.082   nadrin isoform 2 
GRLF1                 0.081   glucocorticoid receptor DNA binding factor 1 
FAM13B                0.081   hypothetical protein LOC51306 isoform 2 
FAM13B                0.081   hypothetical protein LOC51306 isoform 1 
ARHGAP9               0.081   Rho GTPase activating protein 9 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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