Guide to the Human Genome
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Search of human proteins with 110735433

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110735433 CD177 molecule [Homo sapiens]
         (437 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110735433 CD177 molecule [Homo sapiens]                            920   0.0  
gi|194018544 testis expressed 101 isoform 1 [Homo sapiens]            130   3e-30
gi|194097358 testis expressed 101 isoform 2 [Homo sapiens]            130   3e-30
gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]              89   8e-18
gi|93004088 GPI-anchored metastasis-associated protein homolog [...    42   8e-04
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]             42   0.001
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]             42   0.001
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]             42   0.001
gi|144953905 hypothetical protein LOC55138 [Homo sapiens]              36   0.060
gi|21361472 neural precursor cell expressed, developmentally dow...    35   0.18 
gi|222352094 neural precursor cell expressed, developmentally do...    35   0.18 
gi|222352092 neural precursor cell expressed, developmentally do...    35   0.18 
gi|222352090 neural precursor cell expressed, developmentally do...    35   0.18 
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]               34   0.23 
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo...    33   0.51 
gi|215599585 integrator complex subunit 12 [Homo sapiens]              33   0.67 
gi|21361851 integrator complex subunit 12 [Homo sapiens]               33   0.67 
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]    32   0.87 
gi|116063556 G-protein coupled receptor 88 [Homo sapiens]              32   1.1  
gi|223278374 DNA cross-link repair 1A [Homo sapiens]                   32   1.5  
gi|146261165 phospholipase inhibitor [Homo sapiens]                    32   1.5  
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora...    31   1.9  
gi|88702793 slit-like 2 [Homo sapiens]                                 31   1.9  
gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled...    31   2.5  
gi|239742272 PREDICTED: hypothetical protein XP_002342469 isofor...    31   2.5  
gi|239742270 PREDICTED: hypothetical protein XP_002342468 isofor...    31   2.5  
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ...    30   3.3  
gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi...    30   3.3  
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]             30   4.3  
gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]             30   4.3  

>gi|110735433 CD177 molecule [Homo sapiens]
          Length = 437

 Score =  920 bits (2379), Expect = 0.0
 Identities = 437/437 (100%), Positives = 437/437 (100%)

Query: 1   MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM 60
           MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM
Sbjct: 1   MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM 60

Query: 61  LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW 120
           LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW
Sbjct: 61  LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW 120

Query: 121 APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM 180
           APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM
Sbjct: 121 APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM 180

Query: 181 PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV 240
           PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV
Sbjct: 181 PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV 240

Query: 241 GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN 300
           GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN
Sbjct: 241 GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN 300

Query: 301 SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG 360
           SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG
Sbjct: 301 SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG 360

Query: 361 GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV 420
           GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV
Sbjct: 361 GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV 420

Query: 421 GLALAPALWWGVVCPSC 437
           GLALAPALWWGVVCPSC
Sbjct: 421 GLALAPALWWGVVCPSC 437


>gi|194018544 testis expressed 101 isoform 1 [Homo sapiens]
          Length = 267

 Score =  130 bits (326), Expect = 3e-30
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 11/220 (5%)

Query: 209 LTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTV 268
           L C +G ++    + A    +WTT   E C+ G +CQET+L++  G  + ++ TKGC   
Sbjct: 44  LYCQKGLSMTVEADPANM-FNWTTEEVETCDKGALCQETILIIKAGTETAILATKGCIPE 102

Query: 269 GAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTC 328
           G + +     HS+PPG++V SY+++C    CN   S S         A+ V     CPTC
Sbjct: 103 G-EEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSETTASTVSTTLHCPTC 161

Query: 329 VQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIG 388
           V  LGTC S +P + CP G T CY G + ++GGG+ + + ++GC A     L++    +G
Sbjct: 162 VA-LGTCFS-APSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCRLMSGILAVG 219

Query: 389 IFSARE----KRDVQPPASQHEGGGAEGLESLTWGVGLAL 424
               RE    +   QP  +++   GA  L    WG+ L L
Sbjct: 220 PMFVREACPHQLLTQPRKTEN---GATCLPIPVWGLQLLL 256



 Score =  115 bits (287), Expect = 1e-25
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 7/204 (3%)

Query: 4   VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNT-SCDSGLGCQDTLMLI 62
           +L+L +LG  L   G++ L CQ G    V         WT +   +CD G  CQ+T+++I
Sbjct: 27  LLILLVLGASLLTSGLE-LYCQKGLSMTVEADPANMFNWTTEEVETCDKGALCQETILII 85

Query: 63  ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWA- 121
           ++G + +++ +KGC    ++   + +H   PGL + SY+  C ++ FCN+  +    W  
Sbjct: 86  KAGTETAILATKGCIPEGEEAITIVQHSSPPGLIVTSYSNYC-EDSFCNDKDSLSQFWEF 144

Query: 122 PQPPADPGS--LRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGC 179
            +  A   S  L CP C+++  C    +   CP GTT CY G L + GGGI S++ V+GC
Sbjct: 145 SETTASTVSTTLHCPTCVALGTCFSAPSLP-CPNGTTRCYQGKLEITGGGIESSVEVKGC 203

Query: 180 MPQPVCNLLNGTQEIGPVGMTENC 203
                C L++G   +GP+ + E C
Sbjct: 204 TAMIGCRLMSGILAVGPMFVREAC 227


>gi|194097358 testis expressed 101 isoform 2 [Homo sapiens]
          Length = 249

 Score =  130 bits (326), Expect = 3e-30
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 11/220 (5%)

Query: 209 LTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTV 268
           L C +G ++    + A    +WTT   E C+ G +CQET+L++  G  + ++ TKGC   
Sbjct: 26  LYCQKGLSMTVEADPANM-FNWTTEEVETCDKGALCQETILIIKAGTETAILATKGCIPE 84

Query: 269 GAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTC 328
           G + +     HS+PPG++V SY+++C    CN   S S         A+ V     CPTC
Sbjct: 85  G-EEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSETTASTVSTTLHCPTC 143

Query: 329 VQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIG 388
           V  LGTC S +P + CP G T CY G + ++GGG+ + + ++GC A     L++    +G
Sbjct: 144 VA-LGTCFS-APSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCRLMSGILAVG 201

Query: 389 IFSARE----KRDVQPPASQHEGGGAEGLESLTWGVGLAL 424
               RE    +   QP  +++   GA  L    WG+ L L
Sbjct: 202 PMFVREACPHQLLTQPRKTEN---GATCLPIPVWGLQLLL 238



 Score =  115 bits (287), Expect = 1e-25
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 7/204 (3%)

Query: 4   VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNT-SCDSGLGCQDTLMLI 62
           +L+L +LG  L   G++ L CQ G    V         WT +   +CD G  CQ+T+++I
Sbjct: 9   LLILLVLGASLLTSGLE-LYCQKGLSMTVEADPANMFNWTTEEVETCDKGALCQETILII 67

Query: 63  ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWA- 121
           ++G + +++ +KGC    ++   + +H   PGL + SY+  C ++ FCN+  +    W  
Sbjct: 68  KAGTETAILATKGCIPEGEEAITIVQHSSPPGLIVTSYSNYC-EDSFCNDKDSLSQFWEF 126

Query: 122 PQPPADPGS--LRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGC 179
            +  A   S  L CP C+++  C    +   CP GTT CY G L + GGGI S++ V+GC
Sbjct: 127 SETTASTVSTTLHCPTCVALGTCFSAPSLP-CPNGTTRCYQGKLEITGGGIESSVEVKGC 185

Query: 180 MPQPVCNLLNGTQEIGPVGMTENC 203
                C L++G   +GP+ + E C
Sbjct: 186 TAMIGCRLMSGILAVGPMFVREAC 209


>gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]
          Length = 246

 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 10/206 (4%)

Query: 4   VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWT-PKNTSCDSGLGCQDTLMLI 62
           V L  LLG I  LP   ALLC   T      V+    +W   +N  C    GC++TL+ I
Sbjct: 9   VQLFCLLGAISTLPRAGALLCYEATASRFRAVAFHNWKWLLMRNMVCKLQEGCEETLVFI 68

Query: 63  ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLP---L 119
           E+G    +V  KGC+ +     +++     PG+S+ SY+ VCR    CNNL N  P   L
Sbjct: 69  ETGTARGVVGFKGCSSSSSYPAQISYLVSPPGVSIASYSRVCRSY-LCNNLTNLEPFVKL 127

Query: 120 WAPQPPA-DPGSLRCPVCLS--MEGCLEG-TTEEICPKGTTHCYDGLLRLRGGGIFSNLR 175
            A  P +    S  CP C+   M+ CL    T   CP   + CY   L+ + G + +   
Sbjct: 128 KASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQAGFLNTTFL 187

Query: 176 VQGCMPQPVCNLLNGTQEIGPVGMTE 201
           + GC  +    LL     IG + +TE
Sbjct: 188 LMGCAREH-NQLLADFHHIGSIKVTE 212



 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 9/199 (4%)

Query: 230 WTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVAS 289
           W      +C++ + C+ETL+ ++ G    +VG KGCS+  +  +Q + + S PPGV +AS
Sbjct: 47  WLLMRNMVCKLQEGCEETLVFIETGTARGVVGFKGCSSSSSYPAQISYLVS-PPGVSIAS 105

Query: 290 YTHFCSSDLCNSASSSS--VLLNSLPPQAAPVPGDRQCPTCV-QPLGTC-SSGSPRMTCP 345
           Y+  C S LCN+ ++    V L +  P++        CPTCV + +  C  +     +CP
Sbjct: 106 YSRVCRSYLCNNLTNLEPFVKLKASTPKSI-TSASCSCPTCVGEHMKDCLPNFVTTNSCP 164

Query: 346 RGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQH 405
             A+ CY   +    G L+T   + GC A+  + LL     IG     E  ++       
Sbjct: 165 LAASTCYSSTLKFQAGFLNTTFLLMGC-AREHNQLLADFHHIGSIKVTEVLNIL--EKSQ 221

Query: 406 EGGGAEGLESLTWGVGLAL 424
             G A   +   WGV L L
Sbjct: 222 IVGAASSRQDPAWGVVLGL 240


>gi|93004088 GPI-anchored metastasis-associated protein homolog
           [Homo sapiens]
          Length = 346

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 235 TEMCEVG-QVCQETLLLLDVGLTSTLVGTKGC-STVGAQNSQKTTIHSAPPGVLVASYTH 292
           T  C  G  VC E +  ++       +  +GC S +  +N +   +H    G+L      
Sbjct: 51  TVKCAPGVDVCTEAVGAVETIHGQFSLAVRGCGSGLPGKNDRGLDLH----GLLAFIQLQ 106

Query: 293 FCSSDLCNSASS-SSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGS--PRMTCPRGAT 349
            C+ D CN+  + +S  L+    ++A  P   +C +CV        G+  P ++C   + 
Sbjct: 107 QCAQDRCNAKLNLTSRALDPAGNESAYPPNGVECYSCVGLSREACQGTSPPVVSCYNASD 166

Query: 350 H----CYDGYIHLSGGGLSTKMSIQGCV 373
           H    C+DG + L+   ++  + ++GCV
Sbjct: 167 HVYKGCFDGNVTLTAANVTVSLPVRGCV 194



 Score = 32.3 bits (72), Expect = 0.87
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 107 EDFCNNLVNSLPLWAPQPPAD-----PGSLRCPVC--LSMEGCLEGTTEEI--CPKGTTH 157
           +D CN  +N L   A  P  +     P  + C  C  LS E C +GT+  +  C   + H
Sbjct: 110 QDRCNAKLN-LTSRALDPAGNESAYPPNGVECYSCVGLSREAC-QGTSPPVVSCYNASDH 167

Query: 158 ----CYDGLLRLRGGGIFSNLRVQGCMPQPVC 185
               C+DG + L    +  +L V+GC+    C
Sbjct: 168 VYKGCFDGNVTLTAANVTVSLPVRGCVQDEFC 199


>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 74  KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133
           KGC  ++D    V    MGP   +++ +F C Q D CN+   S+PL           L C
Sbjct: 72  KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126

Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185
           P C +   + C+   T   C     HC      ++ G       ++GC  + +C
Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178



 Score = 33.5 bits (75), Expect = 0.39
 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353
           C SD CNSA  S  L N              CP C         G P   C     HC  
Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153

Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379
              H+  G    + +++GC  +   F
Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179


>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 74  KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133
           KGC  ++D    V    MGP   +++ +F C Q D CN+   S+PL           L C
Sbjct: 72  KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126

Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185
           P C +   + C+   T   C     HC      ++ G       ++GC  + +C
Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178



 Score = 33.5 bits (75), Expect = 0.39
 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353
           C SD CNSA  S  L N              CP C         G P   C     HC  
Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153

Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379
              H+  G    + +++GC  +   F
Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179


>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 74  KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133
           KGC  ++D    V    MGP   +++ +F C Q D CN+   S+PL           L C
Sbjct: 72  KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126

Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185
           P C +   + C+   T   C     HC      ++ G       ++GC  + +C
Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178



 Score = 33.5 bits (75), Expect = 0.39
 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353
           C SD CNSA  S  L N              CP C         G P   C     HC  
Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153

Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379
              H+  G    + +++GC  +   F
Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179


>gi|144953905 hypothetical protein LOC55138 [Homo sapiens]
          Length = 464

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 54/191 (28%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290
           S TEM + G V      L    L+S+  +G K   T  A +  +T + H  P  +LV   
Sbjct: 169 SATEMSDRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQTAVRHQGPEPLLVVKP 228

Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346
           TH   +  C     +AS +  LL ++ PQA     D++     QP            CP 
Sbjct: 229 THSSPAGGCREVPQAASKTHGLLQAVSPQAQ----DKRPAVTSQP------------CPP 272

Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQPSSFLLNHTR------QIGIFSAREKRD 397
            ATH      +LS   G   S    IQ C+  P    L   +      Q G   A E  +
Sbjct: 273 AATHSLGLGSNLSFGPGAKRSAPAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPE--N 330

Query: 398 VQPPASQHEGG 408
           +QPP +  E G
Sbjct: 331 LQPPPAATELG 341


>gi|21361472 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 3 [Homo sapiens]
          Length = 955

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%)

Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168
           +SL L  P PPA PGS   P  LS E        +I P      +  L+      RLR  
Sbjct: 285 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 341

Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228
            +   +  QG +P P    ++ T  + P G  E  D K        T  + H N     T
Sbjct: 342 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 391

Query: 229 DWTTSNTEMCEVG 241
            WT    ++ E G
Sbjct: 392 TWTRPIMQLAEDG 404


>gi|222352094 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 6 [Homo sapiens]
          Length = 834

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%)

Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168
           +SL L  P PPA PGS   P  LS E        +I P      +  L+      RLR  
Sbjct: 164 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 220

Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228
            +   +  QG +P P    ++ T  + P G  E  D K        T  + H N     T
Sbjct: 221 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 270

Query: 229 DWTTSNTEMCEVG 241
            WT    ++ E G
Sbjct: 271 TWTRPIMQLAEDG 283


>gi|222352092 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 6 [Homo sapiens]
          Length = 834

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%)

Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168
           +SL L  P PPA PGS   P  LS E        +I P      +  L+      RLR  
Sbjct: 164 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 220

Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228
            +   +  QG +P P    ++ T  + P G  E  D K        T  + H N     T
Sbjct: 221 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 270

Query: 229 DWTTSNTEMCEVG 241
            WT    ++ E G
Sbjct: 271 TWTRPIMQLAEDG 283


>gi|222352090 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 5 [Homo sapiens]
          Length = 947

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%)

Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168
           +SL L  P PPA PGS   P  LS E        +I P      +  L+      RLR  
Sbjct: 277 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 333

Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228
            +   +  QG +P P    ++ T  + P G  E  D K        T  + H N     T
Sbjct: 334 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 383

Query: 229 DWTTSNTEMCEVG 241
            WT    ++ E G
Sbjct: 384 TWTRPIMQLAEDG 396


>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
          Length = 171

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 312 LPPQAAPVPGDRQCPTCVQPLGT--CSSGSPRMTCPRGATHCYDGY-IHLSGGGLS 364
           L P   P PG  +C TC +      C+  +P + CPR   +CY  + + ++G  +S
Sbjct: 36  LHPSTTPYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSIS 91


>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
            sapiens]
          Length = 2517

 Score = 33.1 bits (74), Expect = 0.51
 Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 21/134 (15%)

Query: 315  QAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR-GATHCYDGYIHL---SGGGLSTKMSIQ 370
            QA PV  D  CP CV PLG C    P + C       C++ Y+         L+    I 
Sbjct: 2061 QAVPVRPDH-CPVCVSPLG-CDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIA 2118

Query: 371  GCVAQPS-SFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGVG------LA 423
             C AQP+ +F+        + S  EK  ++        G  E   +LTW         + 
Sbjct: 2119 DCPAQPTGAFIRAIVSSPEVISKYEKALLR--------GYVESCSNLTWCTNPQGCDRIL 2170

Query: 424  LAPALWWGVVCPSC 437
                L  G  C  C
Sbjct: 2171 CRQGLGCGTTCSKC 2184


>gi|215599585 integrator complex subunit 12 [Homo sapiens]
          Length = 462

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 227 PTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGC--STVGAQNSQKTTIHSAPPG 284
           P+    S+T     G+    +     VGLT     +KG   S +G+ NS   T+   PP 
Sbjct: 305 PSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPP 364

Query: 285 VLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPG 321
            L    T    S  C++ S        LP  ++ VPG
Sbjct: 365 PLTLGKTGLSRSVSCDNVSKV-----GLPSPSSLVPG 396


>gi|21361851 integrator complex subunit 12 [Homo sapiens]
          Length = 462

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 227 PTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGC--STVGAQNSQKTTIHSAPPG 284
           P+    S+T     G+    +     VGLT     +KG   S +G+ NS   T+   PP 
Sbjct: 305 PSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPP 364

Query: 285 VLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPG 321
            L    T    S  C++ S        LP  ++ VPG
Sbjct: 365 PLTLGKTGLSRSVSCDNVSKV-----GLPSPSSLVPG 396


>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
          Length = 1379

 Score = 32.3 bits (72), Expect = 0.87
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 251 LDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVAS---YTHFCSSDLCNSASSSSV 307
           L +G  S L   K    + +Q S  + IH  PPG +  +   Y+   S+DL   ASSS+ 
Sbjct: 780 LGLGAMSRLPSAKSRILIASQRSSASAIH--PPGPITTATSLYSSDPSADL-KKASSSNA 836

Query: 308 LLNSLPPQAAPVPGDRQCP 326
             ++LP      PG  + P
Sbjct: 837 AKSNLPKSGLRPPGYSRLP 855


>gi|116063556 G-protein coupled receptor 88 [Homo sapiens]
          Length = 384

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 113 LVNSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLR 164
           LV  LP WAP+P A P  +  P  L+    L  T   +      HCY G++R
Sbjct: 172 LVLLLPPWAPRPGAAPPRVHYPALLAAAALLAQTALLL------HCYLGIVR 217


>gi|223278374 DNA cross-link repair 1A [Homo sapiens]
          Length = 1040

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 21/106 (19%)

Query: 260 VGTKGCST--VGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAA 317
           +G  GC T    +QNS      S   G+            LC +  S  V      P+  
Sbjct: 67  LGNAGCQTSVASSQNS------SCGDGIQQTQDKETTPGKLCRTQKSQHV-----SPKIR 115

Query: 318 PVPGDRQCPTCVQPLGTCSSGSPRM-------TCPRGATHCYDGYI 356
           PV  D  CP C  P  +    +PR        + PR  T C DG +
Sbjct: 116 PVY-DGYCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLL 160


>gi|146261165 phospholipase inhibitor [Homo sapiens]
          Length = 237

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 270 AQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCV 329
           A+N  + T H     V V++  HF     C      S   ++L P    V  + +CP C 
Sbjct: 71  AENCSEET-HITAFTVHVSAEEHFHFVSQCCQGKECSNTSDALDPPLKNVSSNAECPACY 129

Query: 330 QPLGTCSSGSP 340
           +  GT   G P
Sbjct: 130 ESNGTSCRGKP 140


>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 6 [Homo sapiens]
          Length = 1093

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 25/158 (15%)

Query: 257 STLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQA 316
           ST     G S++G  NS  T+      G              C S SSSS+  +S PP  
Sbjct: 792 STSKSPPGKSSLGLDNSLSTSSEDPHSG--------------CPSRSSSSLSFHSTPP-- 835

Query: 317 APVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQP 376
            P+P  +Q P  + PL    + +P    P+       G   L  G +     + G +A  
Sbjct: 836 -PLPLLQQSPATL-PLALPGAPAPLPPQPQNGLGRAPGAAGL--GAMPMAEGLLGGLAGS 891

Query: 377 SSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLE 414
               LN     G+           PAS  + GGA  L+
Sbjct: 892 GGLPLN-----GLLGGLNGAAAPNPASLSQAGGAPTLQ 924


>gi|88702793 slit-like 2 [Homo sapiens]
          Length = 673

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 310 NSLPPQAAPVPGDRQCP--TCVQPLGTCSSGSPR---MTCPRGATHCY 352
           ++ PP   PVP  + CP  TC+   GTC  G+       CP G T  Y
Sbjct: 394 STAPPTVGPVPQPQDCPPSTCLNG-GTCHLGTRHHLACLCPEGFTGLY 440


>gi|225543461 tetratricopeptide repeat, ankyrin repeat and
           coiled-coil containing 1 isoform 1 [Homo sapiens]
          Length = 1861

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 43/204 (21%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 213 RGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQN 272
           +  T+ T  +    P    TS+T        C      L+  ++ T      C T+ + +
Sbjct: 161 KNETMCTALSQGISPCSTLTSSTASPSTDSPCST----LNSCVSKTAANKSPCETISSPS 216

Query: 273 SQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPL 332
           S   T+ S   G++    +   + D   S+   +   N        V  DR+   C    
Sbjct: 217 S---TLESKDSGIIATITSSSENDDRSGSSLEWNKDGNLRLGVQKGVLHDRRADNCSPVA 273

Query: 333 GTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQI-GIFS 391
              ++GS   T P+  +   DG +  S G  S  M     VA  SS  L     + G  +
Sbjct: 274 EEETTGSAESTLPKAESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTKLEDLSYLDGQRN 333

Query: 392 AREKRDVQPPASQHEGGGAEGLES 415
           A  +  ++ P     GG A+ +++
Sbjct: 334 APLRTSIRLPWHNTAGGRAQEVKA 357


>gi|239742272 PREDICTED: hypothetical protein XP_002342469 isoform 2
           [Homo sapiens]
          Length = 464

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 25/153 (16%)

Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290
           S TEM + G        L    L+S+  +G K   T  A +  +  + H  P  +LV   
Sbjct: 169 SATEMSDRGSALASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAVRHQGPEPLLVVKP 228

Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346
           TH      C     +AS +  LL ++ PQA     D++     QP            CP 
Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAISPQAQ----DKRPAVTSQP------------CPP 272

Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQP 376
            ATH      +LS   G     +  IQ C+  P
Sbjct: 273 AATHSLGLGSNLSFGPGAKRPAQAPIQACLNFP 305


>gi|239742270 PREDICTED: hypothetical protein XP_002342468 isoform 1
           [Homo sapiens]
          Length = 464

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 25/153 (16%)

Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290
           S TEM + G        L    L+S+  +G K   T  A +  +  + H  P  +LV   
Sbjct: 169 SATEMSDRGSALASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAVRHQGPEPLLVVKP 228

Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346
           TH      C     +AS +  LL ++ PQA     D++     QP            CP 
Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAISPQAQ----DKRPAVTSQP------------CPP 272

Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQP 376
            ATH      +LS   G     +  IQ C+  P
Sbjct: 273 AATHSLGLGSNLSFGPGAKRPAQAPIQACLNFP 305


>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
           sapiens]
          Length = 800

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 39/139 (28%), Positives = 52/139 (37%), Gaps = 12/139 (8%)

Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLG--TCSSG------SPRMTCP 345
           CSS   +S S S+VL   L    +P         C+ P+G   C  G      SP  + P
Sbjct: 651 CSSLDDSSPSGSAVLYPGLAASWSPQQSGTGSQNCLHPIGLSCCLPGLLAGLISPCSSDP 710

Query: 346 RGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSF--LLNHTRQIGIFSAREKRDVQPPAS 403
               +C           LST    QG V  P     L    R+   +  R++      +S
Sbjct: 711 TKLGYCVIATYQGEKQRLSTASGPQGRVFPPQKLLPLEMQERKPTPYPPRKRSVDHTGSS 770

Query: 404 QHEGGGAEGLESLTWGVGL 422
           Q EGG  E  E  T+ V L
Sbjct: 771 QQEGGTVE--EVATFSVAL 787


>gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo
           sapiens]
          Length = 464

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 49/187 (26%), Positives = 66/187 (35%), Gaps = 25/187 (13%)

Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQN-SQKTTIHSAPPGVLVASY 290
           S TEM   G V      L    L+S+  +G K   T  A +  Q    H  P  +LV   
Sbjct: 169 SATEMSGRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAFRHQGPEPLLVVKP 228

Query: 291 THFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATH 350
           TH      C     ++   + L   A P   D++     QP            CP  ATH
Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQP------------CPPAATH 276

Query: 351 CYDGYIHLS---GGGLSTKMSIQGCVAQPSSFLLNHTR------QIGIFSAREKRDVQPP 401
                 +LS   G     +  IQ C+  P    L   +      Q G   A E  ++QPP
Sbjct: 277 SLGLGSNLSFGPGAKRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPE--NLQPP 334

Query: 402 ASQHEGG 408
            +  E G
Sbjct: 335 PAATELG 341


>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
          Length = 1004

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 34/126 (26%)

Query: 216 TIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQK 275
           +I+ H +  Q P+ W +  TE  ++  V     ++ D  +T++L           Q + K
Sbjct: 442 SILKHLSAKQMPSHWDSEQTEKADIKPV-----IVTDSSVTTSL-----------QTADK 485

Query: 276 TTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQ----- 330
           T   S           H+  S  C S  S+   L+  PP  +P   D  C +C +     
Sbjct: 486 TPTPS-----------HYPLS--CPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKT 532

Query: 331 PLGTCS 336
           P GT +
Sbjct: 533 PCGTAN 538


>gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]
          Length = 704

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 34/126 (26%)

Query: 216 TIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQK 275
           +I+ H +  Q P+ W +  TE  ++  V     ++ D  +T++L           Q + K
Sbjct: 442 SILKHLSAKQMPSHWDSEQTEKADIKPV-----IVTDSSVTTSL-----------QTADK 485

Query: 276 TTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQ----- 330
           T   S           H+  S  C S  S+   L+  PP  +P   D  C +C +     
Sbjct: 486 TPTPS-----------HYPLS--CPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKT 532

Query: 331 PLGTCS 336
           P GT +
Sbjct: 533 PCGTAN 538


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,133,510
Number of Sequences: 37866
Number of extensions: 1037611
Number of successful extensions: 2894
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2835
Number of HSP's gapped (non-prelim): 81
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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