BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|110735433 CD177 molecule [Homo sapiens] (437 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|110735433 CD177 molecule [Homo sapiens] 920 0.0 gi|194018544 testis expressed 101 isoform 1 [Homo sapiens] 130 3e-30 gi|194097358 testis expressed 101 isoform 2 [Homo sapiens] 130 3e-30 gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens] 89 8e-18 gi|93004088 GPI-anchored metastasis-associated protein homolog [... 42 8e-04 gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 42 0.001 gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 42 0.001 gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens] 42 0.001 gi|144953905 hypothetical protein LOC55138 [Homo sapiens] 36 0.060 gi|21361472 neural precursor cell expressed, developmentally dow... 35 0.18 gi|222352094 neural precursor cell expressed, developmentally do... 35 0.18 gi|222352092 neural precursor cell expressed, developmentally do... 35 0.18 gi|222352090 neural precursor cell expressed, developmentally do... 35 0.18 gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 34 0.23 gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 33 0.51 gi|215599585 integrator complex subunit 12 [Homo sapiens] 33 0.67 gi|21361851 integrator complex subunit 12 [Homo sapiens] 33 0.67 gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] 32 0.87 gi|116063556 G-protein coupled receptor 88 [Homo sapiens] 32 1.1 gi|223278374 DNA cross-link repair 1A [Homo sapiens] 32 1.5 gi|146261165 phospholipase inhibitor [Homo sapiens] 32 1.5 gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 31 1.9 gi|88702793 slit-like 2 [Homo sapiens] 31 1.9 gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled... 31 2.5 gi|239742272 PREDICTED: hypothetical protein XP_002342469 isofor... 31 2.5 gi|239742270 PREDICTED: hypothetical protein XP_002342468 isofor... 31 2.5 gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 30 3.3 gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi... 30 3.3 gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 30 4.3 gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] 30 4.3 >gi|110735433 CD177 molecule [Homo sapiens] Length = 437 Score = 920 bits (2379), Expect = 0.0 Identities = 437/437 (100%), Positives = 437/437 (100%) Query: 1 MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM 60 MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM Sbjct: 1 MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLM 60 Query: 61 LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW 120 LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW Sbjct: 61 LIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLW 120 Query: 121 APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM 180 APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM Sbjct: 121 APQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCM 180 Query: 181 PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV 240 PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV Sbjct: 181 PQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEV 240 Query: 241 GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN 300 GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN Sbjct: 241 GQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCN 300 Query: 301 SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG 360 SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG Sbjct: 301 SASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSG 360 Query: 361 GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV 420 GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV Sbjct: 361 GGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGV 420 Query: 421 GLALAPALWWGVVCPSC 437 GLALAPALWWGVVCPSC Sbjct: 421 GLALAPALWWGVVCPSC 437 >gi|194018544 testis expressed 101 isoform 1 [Homo sapiens] Length = 267 Score = 130 bits (326), Expect = 3e-30 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 11/220 (5%) Query: 209 LTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTV 268 L C +G ++ + A +WTT E C+ G +CQET+L++ G + ++ TKGC Sbjct: 44 LYCQKGLSMTVEADPANM-FNWTTEEVETCDKGALCQETILIIKAGTETAILATKGCIPE 102 Query: 269 GAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTC 328 G + + HS+PPG++V SY+++C CN S S A+ V CPTC Sbjct: 103 G-EEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSETTASTVSTTLHCPTC 161 Query: 329 VQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIG 388 V LGTC S +P + CP G T CY G + ++GGG+ + + ++GC A L++ +G Sbjct: 162 VA-LGTCFS-APSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCRLMSGILAVG 219 Query: 389 IFSARE----KRDVQPPASQHEGGGAEGLESLTWGVGLAL 424 RE + QP +++ GA L WG+ L L Sbjct: 220 PMFVREACPHQLLTQPRKTEN---GATCLPIPVWGLQLLL 256 Score = 115 bits (287), Expect = 1e-25 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 7/204 (3%) Query: 4 VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNT-SCDSGLGCQDTLMLI 62 +L+L +LG L G++ L CQ G V WT + +CD G CQ+T+++I Sbjct: 27 LLILLVLGASLLTSGLE-LYCQKGLSMTVEADPANMFNWTTEEVETCDKGALCQETILII 85 Query: 63 ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWA- 121 ++G + +++ +KGC ++ + +H PGL + SY+ C ++ FCN+ + W Sbjct: 86 KAGTETAILATKGCIPEGEEAITIVQHSSPPGLIVTSYSNYC-EDSFCNDKDSLSQFWEF 144 Query: 122 PQPPADPGS--LRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGC 179 + A S L CP C+++ C + CP GTT CY G L + GGGI S++ V+GC Sbjct: 145 SETTASTVSTTLHCPTCVALGTCFSAPSLP-CPNGTTRCYQGKLEITGGGIESSVEVKGC 203 Query: 180 MPQPVCNLLNGTQEIGPVGMTENC 203 C L++G +GP+ + E C Sbjct: 204 TAMIGCRLMSGILAVGPMFVREAC 227 >gi|194097358 testis expressed 101 isoform 2 [Homo sapiens] Length = 249 Score = 130 bits (326), Expect = 3e-30 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 11/220 (5%) Query: 209 LTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTV 268 L C +G ++ + A +WTT E C+ G +CQET+L++ G + ++ TKGC Sbjct: 26 LYCQKGLSMTVEADPANM-FNWTTEEVETCDKGALCQETILIIKAGTETAILATKGCIPE 84 Query: 269 GAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTC 328 G + + HS+PPG++V SY+++C CN S S A+ V CPTC Sbjct: 85 G-EEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSETTASTVSTTLHCPTC 143 Query: 329 VQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIG 388 V LGTC S +P + CP G T CY G + ++GGG+ + + ++GC A L++ +G Sbjct: 144 VA-LGTCFS-APSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCRLMSGILAVG 201 Query: 389 IFSARE----KRDVQPPASQHEGGGAEGLESLTWGVGLAL 424 RE + QP +++ GA L WG+ L L Sbjct: 202 PMFVREACPHQLLTQPRKTEN---GATCLPIPVWGLQLLL 238 Score = 115 bits (287), Expect = 1e-25 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 7/204 (3%) Query: 4 VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNT-SCDSGLGCQDTLMLI 62 +L+L +LG L G++ L CQ G V WT + +CD G CQ+T+++I Sbjct: 9 LLILLVLGASLLTSGLE-LYCQKGLSMTVEADPANMFNWTTEEVETCDKGALCQETILII 67 Query: 63 ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWA- 121 ++G + +++ +KGC ++ + +H PGL + SY+ C ++ FCN+ + W Sbjct: 68 KAGTETAILATKGCIPEGEEAITIVQHSSPPGLIVTSYSNYC-EDSFCNDKDSLSQFWEF 126 Query: 122 PQPPADPGS--LRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGC 179 + A S L CP C+++ C + CP GTT CY G L + GGGI S++ V+GC Sbjct: 127 SETTASTVSTTLHCPTCVALGTCFSAPSLP-CPNGTTRCYQGKLEITGGGIESSVEVKGC 185 Query: 180 MPQPVCNLLNGTQEIGPVGMTENC 203 C L++G +GP+ + E C Sbjct: 186 TAMIGCRLMSGILAVGPMFVREAC 209 >gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens] Length = 246 Score = 89.0 bits (219), Expect = 8e-18 Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 10/206 (4%) Query: 4 VLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWT-PKNTSCDSGLGCQDTLMLI 62 V L LLG I LP ALLC T V+ +W +N C GC++TL+ I Sbjct: 9 VQLFCLLGAISTLPRAGALLCYEATASRFRAVAFHNWKWLLMRNMVCKLQEGCEETLVFI 68 Query: 63 ESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLP---L 119 E+G +V KGC+ + +++ PG+S+ SY+ VCR CNNL N P L Sbjct: 69 ETGTARGVVGFKGCSSSSSYPAQISYLVSPPGVSIASYSRVCRSY-LCNNLTNLEPFVKL 127 Query: 120 WAPQPPA-DPGSLRCPVCLS--MEGCLEG-TTEEICPKGTTHCYDGLLRLRGGGIFSNLR 175 A P + S CP C+ M+ CL T CP + CY L+ + G + + Sbjct: 128 KASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQAGFLNTTFL 187 Query: 176 VQGCMPQPVCNLLNGTQEIGPVGMTE 201 + GC + LL IG + +TE Sbjct: 188 LMGCAREH-NQLLADFHHIGSIKVTE 212 Score = 83.6 bits (205), Expect = 3e-16 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 9/199 (4%) Query: 230 WTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVAS 289 W +C++ + C+ETL+ ++ G +VG KGCS+ + +Q + + S PPGV +AS Sbjct: 47 WLLMRNMVCKLQEGCEETLVFIETGTARGVVGFKGCSSSSSYPAQISYLVS-PPGVSIAS 105 Query: 290 YTHFCSSDLCNSASSSS--VLLNSLPPQAAPVPGDRQCPTCV-QPLGTC-SSGSPRMTCP 345 Y+ C S LCN+ ++ V L + P++ CPTCV + + C + +CP Sbjct: 106 YSRVCRSYLCNNLTNLEPFVKLKASTPKSI-TSASCSCPTCVGEHMKDCLPNFVTTNSCP 164 Query: 346 RGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQH 405 A+ CY + G L+T + GC A+ + LL IG E ++ Sbjct: 165 LAASTCYSSTLKFQAGFLNTTFLLMGC-AREHNQLLADFHHIGSIKVTEVLNIL--EKSQ 221 Query: 406 EGGGAEGLESLTWGVGLAL 424 G A + WGV L L Sbjct: 222 IVGAASSRQDPAWGVVLGL 240 >gi|93004088 GPI-anchored metastasis-associated protein homolog [Homo sapiens] Length = 346 Score = 42.4 bits (98), Expect = 8e-04 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 13/148 (8%) Query: 235 TEMCEVG-QVCQETLLLLDVGLTSTLVGTKGC-STVGAQNSQKTTIHSAPPGVLVASYTH 292 T C G VC E + ++ + +GC S + +N + +H G+L Sbjct: 51 TVKCAPGVDVCTEAVGAVETIHGQFSLAVRGCGSGLPGKNDRGLDLH----GLLAFIQLQ 106 Query: 293 FCSSDLCNSASS-SSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGS--PRMTCPRGAT 349 C+ D CN+ + +S L+ ++A P +C +CV G+ P ++C + Sbjct: 107 QCAQDRCNAKLNLTSRALDPAGNESAYPPNGVECYSCVGLSREACQGTSPPVVSCYNASD 166 Query: 350 H----CYDGYIHLSGGGLSTKMSIQGCV 373 H C+DG + L+ ++ + ++GCV Sbjct: 167 HVYKGCFDGNVTLTAANVTVSLPVRGCV 194 Score = 32.3 bits (72), Expect = 0.87 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 15/92 (16%) Query: 107 EDFCNNLVNSLPLWAPQPPAD-----PGSLRCPVC--LSMEGCLEGTTEEI--CPKGTTH 157 +D CN +N L A P + P + C C LS E C +GT+ + C + H Sbjct: 110 QDRCNAKLN-LTSRALDPAGNESAYPPNGVECYSCVGLSREAC-QGTSPPVVSCYNASDH 167 Query: 158 ----CYDGLLRLRGGGIFSNLRVQGCMPQPVC 185 C+DG + L + +L V+GC+ C Sbjct: 168 VYKGCFDGNVTLTAANVTVSLPVRGCVQDEFC 199 >gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] Length = 204 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 74 KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133 KGC ++D V MGP +++ +F C Q D CN+ S+PL L C Sbjct: 72 KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126 Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185 P C + + C+ T C HC ++ G ++GC + +C Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178 Score = 33.5 bits (75), Expect = 0.39 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%) Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353 C SD CNSA S L N CP C G P C HC Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153 Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379 H+ G + +++GC + F Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179 >gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] Length = 204 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 74 KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133 KGC ++D V MGP +++ +F C Q D CN+ S+PL L C Sbjct: 72 KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126 Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185 P C + + C+ T C HC ++ G ++GC + +C Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178 Score = 33.5 bits (75), Expect = 0.39 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%) Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353 C SD CNSA S L N CP C G P C HC Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153 Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379 H+ G + +++GC + F Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179 >gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens] Length = 204 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 74 KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133 KGC ++D V MGP +++ +F C Q D CN+ S+PL L C Sbjct: 72 KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126 Query: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185 P C + + C+ T C HC ++ G ++GC + +C Sbjct: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178 Score = 33.5 bits (75), Expect = 0.39 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%) Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353 C SD CNSA S L N CP C G P C HC Sbjct: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153 Query: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379 H+ G + +++GC + F Sbjct: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179 >gi|144953905 hypothetical protein LOC55138 [Homo sapiens] Length = 464 Score = 36.2 bits (82), Expect = 0.060 Identities = 54/191 (28%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290 S TEM + G V L L+S+ +G K T A + +T + H P +LV Sbjct: 169 SATEMSDRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQTAVRHQGPEPLLVVKP 228 Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346 TH + C +AS + LL ++ PQA D++ QP CP Sbjct: 229 THSSPAGGCREVPQAASKTHGLLQAVSPQAQ----DKRPAVTSQP------------CPP 272 Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQPSSFLLNHTR------QIGIFSAREKRD 397 ATH +LS G S IQ C+ P L + Q G A E + Sbjct: 273 AATHSLGLGSNLSFGPGAKRSAPAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPE--N 330 Query: 398 VQPPASQHEGG 408 +QPP + E G Sbjct: 331 LQPPPAATELG 341 >gi|21361472 neural precursor cell expressed, developmentally down-regulated 4-like isoform 3 [Homo sapiens] Length = 955 Score = 34.7 bits (78), Expect = 0.18 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%) Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168 +SL L P PPA PGS P LS E +I P + L+ RLR Sbjct: 285 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 341 Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228 + + QG +P P ++ T + P G E D K T + H N T Sbjct: 342 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 391 Query: 229 DWTTSNTEMCEVG 241 WT ++ E G Sbjct: 392 TWTRPIMQLAEDG 404 >gi|222352094 neural precursor cell expressed, developmentally down-regulated 4-like isoform 6 [Homo sapiens] Length = 834 Score = 34.7 bits (78), Expect = 0.18 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%) Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168 +SL L P PPA PGS P LS E +I P + L+ RLR Sbjct: 164 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 220 Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228 + + QG +P P ++ T + P G E D K T + H N T Sbjct: 221 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 270 Query: 229 DWTTSNTEMCEVG 241 WT ++ E G Sbjct: 271 TWTRPIMQLAEDG 283 >gi|222352092 neural precursor cell expressed, developmentally down-regulated 4-like isoform 6 [Homo sapiens] Length = 834 Score = 34.7 bits (78), Expect = 0.18 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%) Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168 +SL L P PPA PGS P LS E +I P + L+ RLR Sbjct: 164 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 220 Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228 + + QG +P P ++ T + P G E D K T + H N T Sbjct: 221 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 270 Query: 229 DWTTSNTEMCEVG 241 WT ++ E G Sbjct: 271 TWTRPIMQLAEDG 283 >gi|222352090 neural precursor cell expressed, developmentally down-regulated 4-like isoform 5 [Homo sapiens] Length = 947 Score = 34.7 bits (78), Expect = 0.18 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 19/133 (14%) Query: 115 NSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLL------RLRGG 168 +SL L P PPA PGS P LS E +I P + L+ RLR Sbjct: 277 DSLGLALPPPPASPGSRTSPQELSEE---LSRRLQITPDSNGEQFSSLIQREPSSRLRSC 333 Query: 169 GIFSNLRVQGCMPQPVCNLLNGTQEIGPVGMTENCDMKDFLTCHRGTTIMTHGNLAQEPT 228 + + QG +P P ++ T + P G E D K T + H N T Sbjct: 334 SVTDAVAEQGHLPPPSVAYVHTTPGL-PSGWEERKDAKG------RTYYVNHNN---RTT 383 Query: 229 DWTTSNTEMCEVG 241 WT ++ E G Sbjct: 384 TWTRPIMQLAEDG 396 >gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] Length = 171 Score = 34.3 bits (77), Expect = 0.23 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 312 LPPQAAPVPGDRQCPTCVQPLGT--CSSGSPRMTCPRGATHCYDGY-IHLSGGGLS 364 L P P PG +C TC + C+ +P + CPR +CY + + ++G +S Sbjct: 36 LHPSTTPYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSIS 91 >gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo sapiens] Length = 2517 Score = 33.1 bits (74), Expect = 0.51 Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 21/134 (15%) Query: 315 QAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR-GATHCYDGYIHL---SGGGLSTKMSIQ 370 QA PV D CP CV PLG C P + C C++ Y+ L+ I Sbjct: 2061 QAVPVRPDH-CPVCVSPLG-CDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIA 2118 Query: 371 GCVAQPS-SFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGVG------LA 423 C AQP+ +F+ + S EK ++ G E +LTW + Sbjct: 2119 DCPAQPTGAFIRAIVSSPEVISKYEKALLR--------GYVESCSNLTWCTNPQGCDRIL 2170 Query: 424 LAPALWWGVVCPSC 437 L G C C Sbjct: 2171 CRQGLGCGTTCSKC 2184 >gi|215599585 integrator complex subunit 12 [Homo sapiens] Length = 462 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 227 PTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGC--STVGAQNSQKTTIHSAPPG 284 P+ S+T G+ + VGLT +KG S +G+ NS T+ PP Sbjct: 305 PSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPP 364 Query: 285 VLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPG 321 L T S C++ S LP ++ VPG Sbjct: 365 PLTLGKTGLSRSVSCDNVSKV-----GLPSPSSLVPG 396 >gi|21361851 integrator complex subunit 12 [Homo sapiens] Length = 462 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 227 PTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGC--STVGAQNSQKTTIHSAPPG 284 P+ S+T G+ + VGLT +KG S +G+ NS T+ PP Sbjct: 305 PSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPP 364 Query: 285 VLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPG 321 L T S C++ S LP ++ VPG Sbjct: 365 PLTLGKTGLSRSVSCDNVSKV-----GLPSPSSLVPG 396 >gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] Length = 1379 Score = 32.3 bits (72), Expect = 0.87 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 251 LDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVAS---YTHFCSSDLCNSASSSSV 307 L +G S L K + +Q S + IH PPG + + Y+ S+DL ASSS+ Sbjct: 780 LGLGAMSRLPSAKSRILIASQRSSASAIH--PPGPITTATSLYSSDPSADL-KKASSSNA 836 Query: 308 LLNSLPPQAAPVPGDRQCP 326 ++LP PG + P Sbjct: 837 AKSNLPKSGLRPPGYSRLP 855 >gi|116063556 G-protein coupled receptor 88 [Homo sapiens] Length = 384 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 113 LVNSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLR 164 LV LP WAP+P A P + P L+ L T + HCY G++R Sbjct: 172 LVLLLPPWAPRPGAAPPRVHYPALLAAAALLAQTALLL------HCYLGIVR 217 >gi|223278374 DNA cross-link repair 1A [Homo sapiens] Length = 1040 Score = 31.6 bits (70), Expect = 1.5 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 21/106 (19%) Query: 260 VGTKGCST--VGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAA 317 +G GC T +QNS S G+ LC + S V P+ Sbjct: 67 LGNAGCQTSVASSQNS------SCGDGIQQTQDKETTPGKLCRTQKSQHV-----SPKIR 115 Query: 318 PVPGDRQCPTCVQPLGTCSSGSPRM-------TCPRGATHCYDGYI 356 PV D CP C P + +PR + PR T C DG + Sbjct: 116 PVY-DGYCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLL 160 >gi|146261165 phospholipase inhibitor [Homo sapiens] Length = 237 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 270 AQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCV 329 A+N + T H V V++ HF C S ++L P V + +CP C Sbjct: 71 AENCSEET-HITAFTVHVSAEEHFHFVSQCCQGKECSNTSDALDPPLKNVSSNAECPACY 129 Query: 330 QPLGTCSSGSP 340 + GT G P Sbjct: 130 ESNGTSCRGKP 140 >gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 [Homo sapiens] Length = 1093 Score = 31.2 bits (69), Expect = 1.9 Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 25/158 (15%) Query: 257 STLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQA 316 ST G S++G NS T+ G C S SSSS+ +S PP Sbjct: 792 STSKSPPGKSSLGLDNSLSTSSEDPHSG--------------CPSRSSSSLSFHSTPP-- 835 Query: 317 APVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQP 376 P+P +Q P + PL + +P P+ G L G + + G +A Sbjct: 836 -PLPLLQQSPATL-PLALPGAPAPLPPQPQNGLGRAPGAAGL--GAMPMAEGLLGGLAGS 891 Query: 377 SSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLE 414 LN G+ PAS + GGA L+ Sbjct: 892 GGLPLN-----GLLGGLNGAAAPNPASLSQAGGAPTLQ 924 >gi|88702793 slit-like 2 [Homo sapiens] Length = 673 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Query: 310 NSLPPQAAPVPGDRQCP--TCVQPLGTCSSGSPR---MTCPRGATHCY 352 ++ PP PVP + CP TC+ GTC G+ CP G T Y Sbjct: 394 STAPPTVGPVPQPQDCPPSTCLNG-GTCHLGTRHHLACLCPEGFTGLY 440 >gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 isoform 1 [Homo sapiens] Length = 1861 Score = 30.8 bits (68), Expect = 2.5 Identities = 43/204 (21%), Positives = 75/204 (36%), Gaps = 8/204 (3%) Query: 213 RGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQN 272 + T+ T + P TS+T C L+ ++ T C T+ + + Sbjct: 161 KNETMCTALSQGISPCSTLTSSTASPSTDSPCST----LNSCVSKTAANKSPCETISSPS 216 Query: 273 SQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPL 332 S T+ S G++ + + D S+ + N V DR+ C Sbjct: 217 S---TLESKDSGIIATITSSSENDDRSGSSLEWNKDGNLRLGVQKGVLHDRRADNCSPVA 273 Query: 333 GTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQI-GIFS 391 ++GS T P+ + DG + S G S M VA SS L + G + Sbjct: 274 EEETTGSAESTLPKAESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTKLEDLSYLDGQRN 333 Query: 392 AREKRDVQPPASQHEGGGAEGLES 415 A + ++ P GG A+ +++ Sbjct: 334 APLRTSIRLPWHNTAGGRAQEVKA 357 >gi|239742272 PREDICTED: hypothetical protein XP_002342469 isoform 2 [Homo sapiens] Length = 464 Score = 30.8 bits (68), Expect = 2.5 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 25/153 (16%) Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290 S TEM + G L L+S+ +G K T A + + + H P +LV Sbjct: 169 SATEMSDRGSALASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAVRHQGPEPLLVVKP 228 Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346 TH C +AS + LL ++ PQA D++ QP CP Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAISPQAQ----DKRPAVTSQP------------CPP 272 Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQP 376 ATH +LS G + IQ C+ P Sbjct: 273 AATHSLGLGSNLSFGPGAKRPAQAPIQACLNFP 305 >gi|239742270 PREDICTED: hypothetical protein XP_002342468 isoform 1 [Homo sapiens] Length = 464 Score = 30.8 bits (68), Expect = 2.5 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 25/153 (16%) Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQNSQKTTI-HSAPPGVLVASY 290 S TEM + G L L+S+ +G K T A + + + H P +LV Sbjct: 169 SATEMSDRGSALASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAVRHQGPEPLLVVKP 228 Query: 291 THFCSSDLC----NSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPR 346 TH C +AS + LL ++ PQA D++ QP CP Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAISPQAQ----DKRPAVTSQP------------CPP 272 Query: 347 GATHCYDGYIHLS---GGGLSTKMSIQGCVAQP 376 ATH +LS G + IQ C+ P Sbjct: 273 AATHSLGLGSNLSFGPGAKRPAQAPIQACLNFP 305 >gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo sapiens] Length = 800 Score = 30.4 bits (67), Expect = 3.3 Identities = 39/139 (28%), Positives = 52/139 (37%), Gaps = 12/139 (8%) Query: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLG--TCSSG------SPRMTCP 345 CSS +S S S+VL L +P C+ P+G C G SP + P Sbjct: 651 CSSLDDSSPSGSAVLYPGLAASWSPQQSGTGSQNCLHPIGLSCCLPGLLAGLISPCSSDP 710 Query: 346 RGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSF--LLNHTRQIGIFSAREKRDVQPPAS 403 +C LST QG V P L R+ + R++ +S Sbjct: 711 TKLGYCVIATYQGEKQRLSTASGPQGRVFPPQKLLPLEMQERKPTPYPPRKRSVDHTGSS 770 Query: 404 QHEGGGAEGLESLTWGVGL 422 Q EGG E E T+ V L Sbjct: 771 QQEGGTVE--EVATFSVAL 787 >gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapiens] Length = 464 Score = 30.4 bits (67), Expect = 3.3 Identities = 49/187 (26%), Positives = 66/187 (35%), Gaps = 25/187 (13%) Query: 233 SNTEMCEVGQVCQETLLLLDVGLTSTL-VGTKGCSTVGAQN-SQKTTIHSAPPGVLVASY 290 S TEM G V L L+S+ +G K T A + Q H P +LV Sbjct: 169 SATEMSGRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADIPQPAFRHQGPEPLLVVKP 228 Query: 291 THFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATH 350 TH C ++ + L A P D++ QP CP ATH Sbjct: 229 THSSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQP------------CPPAATH 276 Query: 351 CYDGYIHLS---GGGLSTKMSIQGCVAQPSSFLLNHTR------QIGIFSAREKRDVQPP 401 +LS G + IQ C+ P L + Q G A E ++QPP Sbjct: 277 SLGLGSNLSFGPGAKRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPE--NLQPP 334 Query: 402 ASQHEGG 408 + E G Sbjct: 335 PAATELG 341 >gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] Length = 1004 Score = 30.0 bits (66), Expect = 4.3 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 34/126 (26%) Query: 216 TIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQK 275 +I+ H + Q P+ W + TE ++ V ++ D +T++L Q + K Sbjct: 442 SILKHLSAKQMPSHWDSEQTEKADIKPV-----IVTDSSVTTSL-----------QTADK 485 Query: 276 TTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQ----- 330 T S H+ S C S S+ L+ PP +P D C +C + Sbjct: 486 TPTPS-----------HYPLS--CPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKT 532 Query: 331 PLGTCS 336 P GT + Sbjct: 533 PCGTAN 538 >gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] Length = 704 Score = 30.0 bits (66), Expect = 4.3 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 34/126 (26%) Query: 216 TIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQK 275 +I+ H + Q P+ W + TE ++ V ++ D +T++L Q + K Sbjct: 442 SILKHLSAKQMPSHWDSEQTEKADIKPV-----IVTDSSVTTSL-----------QTADK 485 Query: 276 TTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQ----- 330 T S H+ S C S S+ L+ PP +P D C +C + Sbjct: 486 TPTPS-----------HYPLS--CPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKKT 532 Query: 331 PLGTCS 336 P GT + Sbjct: 533 PCGTAN 538 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.135 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,133,510 Number of Sequences: 37866 Number of extensions: 1037611 Number of successful extensions: 2894 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 2835 Number of HSP's gapped (non-prelim): 81 length of query: 437 length of database: 18,247,518 effective HSP length: 105 effective length of query: 332 effective length of database: 14,271,588 effective search space: 4738167216 effective search space used: 4738167216 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.