Guide to the Human Genome
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Name: CD177 Sequence: fasta or formatted (437aa) NCBI GI: 110735433
Description:

CD177 molecule

Referenced in:

Neutrophils, Eosinophils, and Basophils
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           2
 C cysteine            6.4         28           1
 D aspartate           3.4         15           1
 E glutamate           4.3         19           2
 F phenylalanine       2.1          9           1
 G glycine            10.5         46           3
 H histidine           2.5         11           1
 I isoleucine          2.7         12           1
 K lysine              2.3         10           1
 L leucine            11.9         52           4
 M methionine          2.5         11           1
 N asparagine          3.2         14           2
 P proline             7.6         33           2
 Q glutamine           5.7         25           1
 R arginine            3.4         15           1
 S serine              8.9         39           4
 T threonine           8.2         36           2
 V valine              6.6         29           2
 W tryptophan          1.6          7           2
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD177 molecule 
TEX101                0.117   testis expressed 101 isoform 1 
TEX101                0.117   testis expressed 101 isoform 2 
LYPD4                 0.072   LY6/PLAUR domain containing 4 
LYPD3                 0.019   GPI-anchored metastasis-associated protein homolog [...
LOC390940             0.019   PREDICTED: similar to R28379_1 
LOC390940             0.019   PREDICTED: similar to R28379_1 
LOC390940             0.019   PREDICTED: similar to R28379_1 
FAM90A1               0.012   hypothetical protein LOC55138 
NEDD4L                0.011   neural precursor cell expressed, developmentally dow...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
NEDD4L                0.011   neural precursor cell expressed, developmentally do...
LYPD6                 0.010   LY6/PLAUR domain containing 6 
CUL9                  0.009   p53-associated parkin-like cytoplasmic protein [Homo...
INTS12                0.009   integrator complex subunit 12 
INTS12                0.009   integrator complex subunit 12 
KIAA0774              0.008   hypothetical protein LOC23281 isoform a 
GPR88                 0.008   G-protein coupled receptor 88 
DCLRE1A               0.008   DNA cross-link repair 1A 
LOC646627             0.008   phospholipase inhibitor 
MLLT6                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
VASN                  0.007   slit-like 2 
TANC1                 0.007   tetratricopeptide repeat, ankyrin repeat and coiled...
LOC100287045          0.007   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.007   PREDICTED: hypothetical protein XP_002342468 isofor...
LOC100289782          0.006   PREDICTED: hypothetical protein XP_002347588 
FAM90A10              0.006   PREDICTED: hypothetical protein LOC441328 
PHF12                 0.006   PHD finger protein 12 isoform 1 
PHF12                 0.006   PHD finger protein 12 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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