Guide to the Human Genome
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Name: EPB41L4B Sequence: fasta or formatted (518aa) NCBI GI: 110624794
Description:

erythrocyte membrane protein band 4.1 like 4B isoform 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [900aa] erythrocyte membrane protein band 4.1 like 4B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         45           4
 C cysteine            1.7          9           1
 D aspartate           5.2         27           3
 E glutamate           5.4         28           2
 F phenylalanine       5.6         29           2
 G glycine             7.7         40           3
 H histidine           4.4         23           2
 I isoleucine          2.7         14           1
 K lysine              5.8         30           2
 L leucine             9.1         47           2
 M methionine          2.1         11           2
 N asparagine          2.7         14           2
 P proline             5.6         29           1
 Q glutamine           4.2         22           1
 R arginine            7.9         41           2
 S serine              7.1         37           3
 T threonine           4.4         23           1
 V valine              4.6         24           3
 W tryptophan          1.4          7           1
 Y tyrosine            3.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1 like 4B isofo... 
EPB41L4B              0.902   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L5               0.504   erythrocyte membrane protein band 4.1 like 5 
EPB41L4A              0.242   erythrocyte protein band 4.1-like 4 
EPB41L2               0.237   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.237   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.237   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L3               0.233   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.229   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.229   erythrocyte membrane protein band 4.1-like 1 isoform...
PTPN4                 0.225   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41                 0.222   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.222   erythrocyte membrane protein band 4.1 (elliptocytosis...
FRMD3                 0.197   FERM domain containing 3 
FRMD5                 0.193   FERM domain containing 5 isoform 2 
FARP1                 0.177   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
EPB41                 0.177   erythrocyte membrane protein band 4.1 (elliptocytosi...
FARP2                 0.168   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD7                 0.160   FERM domain containing 7 
PTPN3                 0.158   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.157   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.100   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN14                0.096   protein tyrosine phosphatase, non-receptor type 14 [...
MYLIP                 0.095   myosin regulatory light chain interacting protein [H...
RDX                   0.087   radixin 
PTPN3                 0.084   protein tyrosine phosphatase, non-receptor type 3 i...
EZR                   0.084   ezrin 
EZR                   0.084   ezrin 
NF2                   0.083   neurofibromin 2 isoform 2 
NF2                   0.083   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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