Guide to the Human Genome
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Name: FRMD7 Sequence: fasta or formatted (714aa) NCBI GI: 34916000
Description:

FERM domain containing 7

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         39           1
 C cysteine            2.1         15           1
 D aspartate           5.2         37           2
 E glutamate           7.1         51           3
 F phenylalanine       5.5         39           2
 G glycine             4.3         31           3
 H histidine           3.4         24           1
 I isoleucine          4.1         29           1
 K lysine              6.6         47           2
 L leucine            10.1         72           3
 M methionine          2.4         17           1
 N asparagine          3.5         25           2
 P proline             6.6         47           2
 Q glutamine           4.9         35           2
 R arginine            6.2         44           3
 S serine              9.7         69           4
 T threonine           4.5         32           1
 V valine              4.6         33           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FERM domain containing 7 
FARP1                 0.285   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FARP2                 0.254   FERM, RhoGEF and pleckstrin domain protein 2 
EPB41L3               0.153   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.151   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.150   erythrocyte membrane protein band 4.1-like 1 isoform...
PTPN4                 0.148   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L2               0.148   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.148   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.148   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41                 0.146   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.146   erythrocyte membrane protein band 4.1 (elliptocytosis...
FRMD5                 0.128   FERM domain containing 5 isoform 2 
EPB41                 0.121   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41L4B              0.118   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.117   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L5               0.115   erythrocyte membrane protein band 4.1 like 5 
FRMD3                 0.110   FERM domain containing 3 
PTPN3                 0.104   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.104   protein tyrosine phosphatase, non-receptor type 3 i...
EPB41L4A              0.103   erythrocyte protein band 4.1-like 4 
RDX                   0.070   radixin 
MSN                   0.069   moesin 
PTPN21                0.068   protein tyrosine phosphatase, non-receptor type 21 ...
EZR                   0.064   ezrin 
EZR                   0.064   ezrin 
NF2                   0.060   neurofibromin 2 isoform 2 
NF2                   0.060   neurofibromin 2 isoform 2 
NF2                   0.060   neurofibromin 2 isoform 2 
NF2                   0.060   neurofibromin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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