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Name: PTPN3 Sequence: fasta or formatted (913aa) NCBI GI: 223941876
Description:

protein tyrosine phosphatase, non-receptor type 3 isoform 1

Referenced in:

Cytoskeleton
Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [868aa] protein tyrosine phosphatase, non-receptor type 3 isoform 2
alt prot [782aa] protein tyrosine phosphatase, non-receptor type 3 isoform 3
alt prot [737aa] protein tyrosine phosphatase, non-receptor type 3 isoform 4
alt prot [626aa] protein tyrosine phosphatase, non-receptor type 3 isoform 5
alt prot [581aa] protein tyrosine phosphatase, non-receptor type 3 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         41           2
 C cysteine            2.2         20           1
 D aspartate           5.9         54           3
 E glutamate           6.0         55           2
 F phenylalanine       3.8         35           2
 G glycine             5.3         48           2
 H histidine           3.7         34           2
 I isoleucine          4.8         44           1
 K lysine              5.5         50           2
 L leucine             9.0         82           2
 M methionine          2.5         23           2
 N asparagine          4.7         43           2
 P proline             5.0         46           2
 Q glutamine           5.5         50           2
 R arginine            5.7         52           3
 S serine              8.5         78           4
 T threonine           5.6         51           2
 V valine              7.0         64           2
 W tryptophan          1.1         10           1
 Y tyrosine            3.6         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 3 i... 
PTPN3                 0.937   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.856   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.793   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.683   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.619   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN4                 0.497   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L2               0.109   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.109   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.109   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L1               0.109   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.108   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41                 0.108   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41L3               0.107   erythrocyte membrane protein band 4.1-like 3 
EPB41                 0.107   erythrocyte membrane protein band 4.1 (elliptocytosis...
PTPN14                0.103   protein tyrosine phosphatase, non-receptor type 14 [...
EPB41L5               0.099   erythrocyte membrane protein band 4.1 like 5 
EPB41L4A              0.093   erythrocyte protein band 4.1-like 4 
EPB41                 0.092   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN21                0.092   protein tyrosine phosphatase, non-receptor type 21 ...
FARP1                 0.091   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
EPB41L4B              0.090   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.090   erythrocyte membrane protein band 4.1 like 4B isofo...
PTPN2                 0.090   protein tyrosine phosphatase, non-receptor type 2 iso...
PTPN2                 0.090   protein tyrosine phosphatase, non-receptor type 2 [H...
PTPN2                 0.090   protein tyrosine phosphatase, non-receptor type 2 is...
PTPN13                0.090   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.090   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.090   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.090   protein tyrosine phosphatase, non-receptor type 13 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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