Guide to the Human Genome
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Name: EPB41L1 Sequence: fasta or formatted (779aa) NCBI GI: 30061491
Description:

erythrocyte membrane protein band 4.1-like 1 isoform b

Referenced in:

ADP-Ribosylation Factors
Cytoskeleton

Other entries for this name:
alt prot [881aa] erythrocyte membrane protein band 4.1-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         52           3
 C cysteine            1.3         10           1
 D aspartate           7.2         56           2
 E glutamate           9.6         75           2
 F phenylalanine       3.6         28           2
 G glycine             5.8         45           2
 H histidine           2.3         18           2
 I isoleucine          4.9         38           3
 K lysine              7.6         59           2
 L leucine             8.0         62           2
 M methionine          1.5         12           1
 N asparagine          2.3         18           1
 P proline             6.0         47           3
 Q glutamine           3.3         26           1
 R arginine            6.9         54           2
 S serine              9.0         70           3
 T threonine           6.3         49           3
 V valine              4.4         34           2
 W tryptophan          0.6          5           1
 Y tyrosine            2.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1-like 1 isoform... 
EPB41L1               0.984   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L2               0.435   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L3               0.387   erythrocyte membrane protein band 4.1-like 3 
EPB41                 0.361   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41L2               0.360   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.360   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41                 0.325   erythrocyte membrane protein band 4.1 (elliptocytosis...
EPB41                 0.298   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN4                 0.193   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L5               0.166   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.156   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.156   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4A              0.156   erythrocyte protein band 4.1-like 4 
FARP1                 0.150   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FRMD5                 0.150   FERM domain containing 5 isoform 2 
FRMD3                 0.149   FERM domain containing 3 
FARP2                 0.142   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD7                 0.139   FERM domain containing 7 
PTPN3                 0.130   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.129   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.085   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.084   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.084   protein tyrosine phosphatase, non-receptor type 21 ...
EZR                   0.081   ezrin 
EZR                   0.081   ezrin 
MSN                   0.076   moesin 
RDX                   0.076   radixin 
NF2                   0.074   neurofibromin 2 isoform 2 
NF2                   0.074   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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