Guide to the Human Genome
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Name: EPB41L4A Sequence: fasta or formatted (686aa) NCBI GI: 87042275
Description:

erythrocyte protein band 4.1-like 4

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         31           2
 C cysteine            1.7         12           1
 D aspartate           4.5         31           1
 E glutamate           8.0         55           2
 F phenylalanine       3.1         21           3
 G glycine             4.8         33           1
 H histidine           3.2         22           2
 I isoleucine          3.9         27           2
 K lysine              8.2         56           2
 L leucine             6.9         47           3
 M methionine          1.2          8           1
 N asparagine          4.8         33           2
 P proline             5.7         39           2
 Q glutamine           5.4         37           3
 R arginine            8.3         57           3
 S serine              9.9         68           2
 T threonine           6.0         41           2
 V valine              5.0         34           3
 W tryptophan          0.9          6           1
 Y tyrosine            4.1         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte protein band 4.1-like 4 
EPB41L5               0.191   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.185   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.185   erythrocyte membrane protein band 4.1 like 4B isofo...
PTPN4                 0.183   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L1               0.175   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L3               0.173   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.172   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41                 0.166   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.166   erythrocyte membrane protein band 4.1 (elliptocytosis...
FRMD5                 0.166   FERM domain containing 5 isoform 2 
FRMD3                 0.164   FERM domain containing 3 
EPB41L2               0.161   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.161   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.161   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41                 0.143   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN3                 0.124   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.123   protein tyrosine phosphatase, non-receptor type 3 i...
FARP1                 0.119   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FARP2                 0.108   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD7                 0.107   FERM domain containing 7 
PTPN21                0.082   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN3                 0.081   protein tyrosine phosphatase, non-receptor type 3 i...
EZR                   0.079   ezrin 
EZR                   0.079   ezrin 
PTPN3                 0.079   protein tyrosine phosphatase, non-receptor type 3 i...
RDX                   0.078   radixin 
MSN                   0.076   moesin 
PTPN14                0.075   protein tyrosine phosphatase, non-receptor type 14 [...
NF2                   0.071   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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