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Search of human proteins with 110624765
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 956 0.0
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 370 e-102
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 360 1e-99
gi|110624763 POU domain, class 3, transcription factor 4 [Homo s... 310 1e-84
gi|148664218 POU transcription factor [Homo sapiens] 207 2e-53
gi|42560248 POU domain, class 5, transcription factor 1 isoform ... 202 5e-52
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 202 7e-52
gi|4505959 POU domain, class 2, transcription factor 2 [Homo sap... 198 7e-51
gi|227430410 POU class 5 homeobox 1B [Homo sapiens] 197 2e-50
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 194 1e-49
gi|116235491 POU domain, class 5, transcription factor 1 isoform... 189 6e-48
gi|170650730 pituitary specific transcription factor 1 isoform b... 181 1e-45
gi|4505955 pituitary specific transcription factor 1 isoform alp... 181 1e-45
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 169 5e-42
gi|4505965 POU class 4 homeobox 3 [Homo sapiens] 155 5e-38
gi|23463326 POU domain class 5, transcription factor 2 [Homo sap... 139 5e-33
gi|223890225 POU class 6 homeobox 1 [Homo sapiens] 127 2e-29
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 101 2e-21
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 72 1e-12
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 72 1e-12
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 72 1e-12
gi|89257348 homeo box HB9 [Homo sapiens] 62 8e-10
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 62 1e-09
gi|40288197 GATA binding protein 6 [Homo sapiens] 62 1e-09
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 62 1e-09
gi|195972866 keratin 10 [Homo sapiens] 61 2e-09
gi|109452587 family with sequence similarity 98, member B isofor... 59 7e-09
gi|55956899 keratin 9 [Homo sapiens] 59 1e-08
gi|226437602 NK1 homeobox 2 [Homo sapiens] 57 3e-08
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 57 3e-08
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 956 bits (2470), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA 60
MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA
Sbjct: 1 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA 60
Query: 61 GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG 120
GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG
Sbjct: 61 GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG 120
Query: 121 AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 180
AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG
Sbjct: 121 AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 180
Query: 181 GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS 240
GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS
Sbjct: 181 GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS 240
Query: 241 VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ 300
VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ
Sbjct: 241 VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ 300
Query: 301 LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK 360
LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK
Sbjct: 301 LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK 360
Query: 361 CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG 420
CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG
Sbjct: 361 CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG 420
Query: 421 GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ 451
GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ
Sbjct: 421 GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ 451
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 370 bits (951), Expect = e-102
Identities = 251/502 (50%), Positives = 271/502 (53%), Gaps = 101/502 (20%)
Query: 11 GPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQK-LMHHEWLGAGAGHPVGLA 69
G GGGAGG G M P +AA + A + ++ + VQ M + GH + A
Sbjct: 39 GGGGGAGGGGGGMQPGSAAVTSGAYRGD----PSSVKMVQSDFMQGAMAASNGGHMLSHA 94
Query: 70 HPQW---LPTGGG-----------GGGDWAGG---------------PHLEHGKAGGGGT 100
H QW LP W+G P G GG
Sbjct: 95 H-QWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPPPPPPQGPDVKGGA 153
Query: 101 GRADDGGGGGGFHAR----------LVHQG-------AAHAGAAWAQGSTAHHLGPAMSP 143
GR DD G H R HQG AA A AA A + A HL
Sbjct: 154 GR-DDLHAGTALHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHL------ 206
Query: 144 SPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAA------GGGGAGPGLHHALHEDGHE 197
P +GG QP P L Y GG + GML+A GGGGAG G +H
Sbjct: 207 -PSMAGGQQPPPQSL----LYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPG--- 258
Query: 198 AQLEPSPPPHLGA---HGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVG-----EHSDEDA 249
L P L H H H H H H A H G GGGG+ G HSDED
Sbjct: 259 --LVRGDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDT 316
Query: 250 PSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 309
P+SDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL
Sbjct: 317 PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 376
Query: 310 KPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEI 369
KPLLNKWLEE DSS+GSPT++DKIAAQGRKRKKRTSIEV VKGALESHFLKCPKPSA EI
Sbjct: 377 KPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEI 436
Query: 370 TGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPSA 429
T LADSLQLEKEVVRVWFCNRRQKEKRMTP G DDVY+ SA
Sbjct: 437 TNLADSLQLEKEVVRVWFCNRRQKEKRMTP-PGIQQQTPDDVYSQ---------VGTVSA 486
Query: 430 PPPPPPAALHHHHHHTLPGSVQ 451
PPP HH L SVQ
Sbjct: 487 DTPPP--------HHGLQTSVQ 500
Score = 49.3 bits (116), Expect = 7e-06
Identities = 64/206 (31%), Positives = 72/206 (34%), Gaps = 51/206 (24%)
Query: 68 LAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFH--ARLVHQGAAHAG 125
+ H GGGGGG GGGG G A GGGGGG + V GA
Sbjct: 21 IVHSDAAGAGGGGGG------------GGGGGGGGA--GGGGGGMQPGSAAVTSGAYRGD 66
Query: 126 AAWAQGSTAHHLGPAMSPSPGA---SGGHQ-----PQPLGLYAQAAYP--------GGGG 169
+ + + + AM+ S G S HQ P A AA G
Sbjct: 67 PSSVKMVQSDFMQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSA 126
Query: 170 GGLAGMLA--------------AGGGGAGPGLH--HALHEDGHEAQLEPSPPPHL---GA 210
G+AG GG LH ALH G P PPPH G
Sbjct: 127 VGMAGSPQQPPQPPPPPPQGPDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPPHQGHPGG 186
Query: 211 HGHAHGHAHAGGLHAAAAHLHPGAGG 236
G A A A AAAAHL AGG
Sbjct: 187 WGAAAAAAAAAAAAAAAAHLPSMAGG 212
Score = 39.3 bits (90), Expect = 0.007
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 22/115 (19%)
Query: 158 LYAQAAYPGGGGGGLAGMLAAGGGGAGPGLH------------------HALHEDGHEAQ 199
+++ AA GGGGGG G G GG G G+ + D +
Sbjct: 22 VHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMVQSDFMQGA 81
Query: 200 LEPSPPPHLGAHGH----AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAP 250
+ S H+ +H H A HA A AAAA + + GS+VG P
Sbjct: 82 MAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQP 136
Score = 37.7 bits (86), Expect = 0.021
Identities = 32/100 (32%), Positives = 36/100 (36%), Gaps = 18/100 (18%)
Query: 9 PRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLM--HHEWLGAGAGHPV 66
P GPGGG GG G A +H G + +L HH HP
Sbjct: 237 PPGPGGGGGGAG-------------GGAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHPP 283
Query: 67 GLAHPQWLPTGGGGGGDWAGGPHL-EHGKAGGGGTGRADD 105
H Q P GGGGG GP L H T +DD
Sbjct: 284 HPHHAQGPPHHGGGGG--GAGPGLNSHDPHSDEDTPTSDD 321
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 360 bits (924), Expect = 1e-99
Identities = 228/436 (52%), Positives = 248/436 (56%), Gaps = 89/436 (20%)
Query: 46 YREVQKLMHHEWLGA--GAGHPVGLAHPQWLPT---GGGGGGDWAGGPHLEHGKAGGGGT 100
YRE Q L+ ++ GA GHP+ AH QW+ GGGGGG GG G GG G+
Sbjct: 34 YREAQSLVQGDY-GALQSNGHPLSHAH-QWITALSHGGGGGGGGGGGGGGGGGGGGGDGS 91
Query: 101 ---------------------GRADDGGGGGGFHAR------------------------ 115
GR D+ G G +
Sbjct: 92 PWSTSPLGQPDIKPSVVVQQGGRGDELHGPGALQQQHQQQQQQQQQQQQQQQQQQQQQRP 151
Query: 116 --LVHQGAAH--AGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGG 171
LVH A H AW + A HL P+M S G LY+Q ++
Sbjct: 152 PHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGL---------LYSQPSFT------ 196
Query: 172 LAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLH 231
+ GML AGG AG LHH D H+ P H H H H H H
Sbjct: 197 VNGMLGAGGQPAG--LHHHGLRDAHDE------PHHADHHPHPHSHPHQQPPPPPPPQGP 248
Query: 232 PGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQT 291
PG G HSDED P+SDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQT
Sbjct: 249 PGHPGAHHD--PHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQT 306
Query: 292 TICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVK 351
TICRFEALQLSFKNMCKLKPLLNKWLEE DSSSGSPT++DKIAAQGRKRKKRTSIEV VK
Sbjct: 307 TICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVK 366
Query: 352 GALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDV 411
GALESHFLKCPKPSA EIT LADSLQLEKEVVRVWFCNRRQKEKRMTP G P +DV
Sbjct: 367 GALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGT-LPGAEDV 425
Query: 412 YAPGELGPGGGGASPP 427
Y GG +PP
Sbjct: 426 Y-------GGSRDTPP 434
>gi|110624763 POU domain, class 3, transcription factor 4 [Homo
sapiens]
Length = 361
Score = 310 bits (795), Expect = 1e-84
Identities = 191/380 (50%), Positives = 223/380 (58%), Gaps = 60/380 (15%)
Query: 22 LMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA--GAGHPVGLAHPQWLPTGGG 79
L+H D+A + G+ +R QKL+ ++L GHP+G W+ T
Sbjct: 17 LVHADSAG----------MQQGSPFRNPQKLLQSDYLQGVPSNGHPLG---HHWV-TSLS 62
Query: 80 GGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGP 139
GG W+ GR D G ++H + H A T H
Sbjct: 63 DGGPWSSTLATSPLDQQDVKPGREDLQLGA------IIHHRSPHV--AHHSPHTNHPNAW 114
Query: 140 AMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQ 199
SP+P S QPL +Y+Q + ++GML GG P A + H
Sbjct: 115 GASPAPNPSITSSGQPLNVYSQPGFT------VSGMLEHGGLTPPPAAASA--QSLHPVL 166
Query: 200 LEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSDDLEQFA 259
EP LG+H H +HSDE+ P+SD+LEQFA
Sbjct: 167 REPPDHGELGSH-HCQ---------------------------DHSDEETPTSDELEQFA 198
Query: 260 KQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE 319
KQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE LQLSFKNMCKLKPLLNKWLEE
Sbjct: 199 KQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEGLQLSFKNMCKLKPLLNKWLEE 258
Query: 320 TDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLE 379
DSS+GSPT++DKIAAQGRKRKKRTSIEV VKG LE+HFLKCPKP+A EI+ LADSLQLE
Sbjct: 259 ADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLE 318
Query: 380 KEVVRVWFCNRRQKEKRMTP 399
KEVVRVWFCNRRQKEKRMTP
Sbjct: 319 KEVVRVWFCNRRQKEKRMTP 338
>gi|148664218 POU transcription factor [Homo sapiens]
Length = 436
Score = 207 bits (527), Expect = 2e-53
Identities = 135/277 (48%), Positives = 157/277 (56%), Gaps = 49/277 (17%)
Query: 184 GPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGE 243
GPGL A GH S PHL A H H P +GG
Sbjct: 142 GPGL--ASQAFGHPGLPGSSLEPHLEASQHLPVPKHL-----------PSSGGA------ 182
Query: 244 HSDEDAPSS-DDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLS 302
D PS ++LE+FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LS
Sbjct: 183 ----DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS 238
Query: 303 FKNMCKLKPLLNKWLEETDSSSGSPT--------NLDKIAAQGRKRKKRTSIEVGVKGAL 354
FKNMCKLKPLL KWL + +SS P+ +L ++ GRKRKKRTSIE ++ L
Sbjct: 239 FKNMCKLKPLLEKWLNDAESSPSDPSVSTPSSYPSLSEVF--GRKRKKRTSIETNIRLTL 296
Query: 355 ESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMT-PAAGAGHPPMDDVYA 413
E F PKPS+ EI+ +A+ L +EKEVVRVWFCNRRQKEKR+ P A PP VY
Sbjct: 297 EKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVATPIKPP---VYN 353
Query: 414 PGELGPGGGGASPPSAPPPPPPAALHHHHHHTLPGSV 450
+ P G P S PP H T+PG+V
Sbjct: 354 SRLVSP-SGSLGPLSVPPV----------HSTMPGTV 379
>gi|42560248 POU domain, class 5, transcription factor 1 isoform 1
[Homo sapiens]
Length = 360
Score = 202 bits (514), Expect = 5e-52
Identities = 136/320 (42%), Positives = 168/320 (52%), Gaps = 56/320 (17%)
Query: 159 YAQAAYPGGGGGGLAG----------MLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 208
+A + PGGGG G G L+ G GPG+ + + P PPP+
Sbjct: 9 FAFSPPPGGGGDGPGGPEPGWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPYE 68
Query: 209 GAHGHAH-------GHAHAGGLHAAAAHLHPGAGGGGSSVG------------------- 242
G A+ G GGL + G G +S G
Sbjct: 69 FCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGAVKLEKEK 128
Query: 243 -----EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE 297
E S + +LEQFAK KQ+RI LG+TQADVGL LG L+G VFSQTTICRFE
Sbjct: 129 LEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFE 188
Query: 298 ALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIA-----AQGRKRKKRTSIEVGVKG 352
ALQLSFKNMCKL+PLL KW+EE D++ NL +I Q RKR KRTSIE V+G
Sbjct: 189 ALQLSFKNMCKLRPLLQKWVEEADNNE----NLQEICKAETLVQARKR-KRTSIENRVRG 243
Query: 353 ALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVY 412
LE+ FL+CPKP+ +I+ +A L LEK+VVRVWFCNRRQK KR + + + +D
Sbjct: 244 NLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR----SSSDYAQREDFE 299
Query: 413 APGELGPGGGGASPPSAPPP 432
A G GG S P AP P
Sbjct: 300 AAGS-PFSGGPVSFPLAPGP 318
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 202 bits (513), Expect = 7e-52
Identities = 104/165 (63%), Positives = 124/165 (75%), Gaps = 7/165 (4%)
Query: 247 EDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNM 306
E+ ++LEQFAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNM
Sbjct: 280 EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNM 339
Query: 307 CKLKPLLNKWLEE-----TDSSSGSPTNLDKIAAQG--RKRKKRTSIEVGVKGALESHFL 359
CKLKPLL KWL + +DSS SP+ L+ +G R+RKKRTSIE ++ ALE FL
Sbjct: 340 CKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFL 399
Query: 360 KCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAG 404
+ KP++ EIT +AD L +EKEV+RVWFCNRRQKEKR+ P + G
Sbjct: 400 ENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGG 444
>gi|4505959 POU domain, class 2, transcription factor 2 [Homo
sapiens]
Length = 463
Score = 198 bits (504), Expect = 7e-51
Identities = 122/246 (49%), Positives = 140/246 (56%), Gaps = 58/246 (23%)
Query: 247 EDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNM 306
E+ ++LEQFA+ FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNM
Sbjct: 179 EEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNM 238
Query: 307 CKLKPLLNKWLEET-----DSSSGSPTNLDKIAA-----QGRKRKKRTSIEVGVKGALES 356
CKLKPLL KWL + DSS SP L + GR+RKKRTSIE V+ ALE
Sbjct: 239 CKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEK 298
Query: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRM------------------- 397
FL KP++ EI +A+ L +EKEV+RVWFCNRRQKEKR+
Sbjct: 299 SFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYS 358
Query: 398 ----TPAAGAGHPPMDDVY------------APGELGP--------GGGGASP-----PS 428
TP GAG P+ A G L P GGGGA+P PS
Sbjct: 359 PHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPS 418
Query: 429 APPPPP 434
PPPP
Sbjct: 419 VTPPPP 424
>gi|227430410 POU class 5 homeobox 1B [Homo sapiens]
Length = 359
Score = 197 bits (500), Expect = 2e-50
Identities = 136/323 (42%), Positives = 168/323 (52%), Gaps = 60/323 (18%)
Query: 159 YAQAAYPGGGGGGLAGM----------LAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 208
+A + PGGGG G G L+ G GPG+ + + P PPP+
Sbjct: 9 FAFSPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPYE 68
Query: 209 GAHGHAH-------GHAHAGGLHAAAAHLHPGAGGGGSSVG------------------- 242
G A+ G GGL + G G +S G
Sbjct: 69 LCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGAVKLEKEK 128
Query: 243 -----EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE 297
E S + +LEQFAK KQ+RI LG+TQADVGL LG L+G VFSQ TICRFE
Sbjct: 129 LEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQKTICRFE 188
Query: 298 ALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIA-----AQGRKRKKRTSIEVGVKG 352
ALQLSFKNMCKL+PLL KW+EE D++ NL +I Q RKR KRTSIE V+G
Sbjct: 189 ALQLSFKNMCKLRPLLQKWVEEADNNE----NLQEICKAETLMQARKR-KRTSIENRVRG 243
Query: 353 ALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVY 412
LE+ FL+CPKP+ +I+ +A L LEK+VVRVWFCNRRQK KR + + + +D
Sbjct: 244 NLENLFLQCPKPTL-QISHIAQQLGLEKDVVRVWFCNRRQKGKR----SSSDYAQREDFE 298
Query: 413 APGELGPGGGGASPPSAPPPPPP 435
A G GG P S PP P P
Sbjct: 299 AAGSPFSGG----PVSFPPAPGP 317
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 194 bits (493), Expect = 1e-49
Identities = 129/314 (41%), Positives = 156/314 (49%), Gaps = 40/314 (12%)
Query: 95 AGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQ 154
AG GG G A GGG H G G G GP P G GG
Sbjct: 129 AGAGGAGAAAGGGGA--------HDGPGGGGGPGGGG------GPGGGPGGGGGGG---- 170
Query: 155 PLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLH---HALHEDGHEAQLEPSPPPHLGAH 211
PGGGGGG G L G P +H H H A PS PH G
Sbjct: 171 ----------PGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLV 220
Query: 212 GHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSD----DLEQFAKQFKQRRI 267
A H A AAAA A + VG SD +LE FA++FKQRRI
Sbjct: 221 AAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERFKQRRI 280
Query: 268 KLGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSS 323
KLG TQADVG AL L G++ SQ+TICRFE+L LS NM LKP+L WLEE + +
Sbjct: 281 KLGVTQADVGSALANLKIPGVGSL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEGA 339
Query: 324 SGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVV 383
N ++ G K++KRTSI K +LE++F P+PS+ +I +A+ L L+K VV
Sbjct: 340 QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 399
Query: 384 RVWFCNRRQKEKRM 397
RVWFCN+RQK+KRM
Sbjct: 400 RVWFCNQRQKQKRM 413
Score = 28.9 bits (63), Expect = 10.0
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
Query: 11 GPGGGAGGTG-----------PLMHPDAAAAAAAAAAAERLHAGAAYRE-VQKLMHHEWL 58
GPGGG GG G P MH + AAAAA + +G + V HH
Sbjct: 170 GPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAA 229
Query: 59 GAGAGHPVG 67
A A G
Sbjct: 230 AAAAAAAAG 238
>gi|116235491 POU domain, class 5, transcription factor 1 isoform 2
[Homo sapiens]
Length = 265
Score = 189 bits (479), Expect = 6e-48
Identities = 107/184 (58%), Positives = 128/184 (69%), Gaps = 15/184 (8%)
Query: 254 DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 313
+LEQFAK KQ+RI LG+TQADVGL LG L+G VFSQTTICRFEALQLSFKNMCKL+PLL
Sbjct: 50 ELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLL 109
Query: 314 NKWLEETDSSSGSPTNLDKIA-----AQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHE 368
KW+EE D++ NL +I Q RKR KRTSIE V+G LE+ FL+CPKP+ +
Sbjct: 110 QKWVEEADNNE----NLQEICKAETLVQARKR-KRTSIENRVRGNLENLFLQCPKPTLQQ 164
Query: 369 ITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPS 428
I+ +A L LEK+VVRVWFCNRRQK KR + + + +D A G GG S P
Sbjct: 165 ISHIAQQLGLEKDVVRVWFCNRRQKGKR----SSSDYAQREDFEAAGS-PFSGGPVSFPL 219
Query: 429 APPP 432
AP P
Sbjct: 220 APGP 223
>gi|170650730 pituitary specific transcription factor 1 isoform beta
[Homo sapiens]
Length = 317
Score = 181 bits (459), Expect = 1e-45
Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 205 PPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQ 264
P H +HG H AA V E D D+P +LE+FA +FK
Sbjct: 108 PDHTLSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKV 167
Query: 265 RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSS 324
RRIKLG+TQ +VG AL ++G+ FSQTTICRFE LQLSFKN CKLK +L+KWLEE +
Sbjct: 168 RRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE-QV 226
Query: 325 GSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVR 384
G+ N +K+ A RKRK+RT+I + K ALE HF + KPS+ EI +A+ L LEKEVVR
Sbjct: 227 GALYN-EKVGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVR 285
Query: 385 VWFCNRRQKEKRM 397
VWFCNRRQ+EKR+
Sbjct: 286 VWFCNRRQREKRV 298
>gi|4505955 pituitary specific transcription factor 1 isoform alpha
[Homo sapiens]
Length = 291
Score = 181 bits (459), Expect = 1e-45
Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 205 PPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQ 264
P H +HG H AA V E D D+P +LE+FA +FK
Sbjct: 82 PDHTLSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKV 141
Query: 265 RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSS 324
RRIKLG+TQ +VG AL ++G+ FSQTTICRFE LQLSFKN CKLK +L+KWLEE +
Sbjct: 142 RRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE-QV 200
Query: 325 GSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVR 384
G+ N +K+ A RKRK+RT+I + K ALE HF + KPS+ EI +A+ L LEKEVVR
Sbjct: 201 GALYN-EKVGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVR 259
Query: 385 VWFCNRRQKEKRM 397
VWFCNRRQ+EKR+
Sbjct: 260 VWFCNRRQREKRV 272
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 169 bits (428), Expect = 5e-42
Identities = 146/411 (35%), Positives = 190/411 (46%), Gaps = 67/411 (16%)
Query: 41 HAGAAYREVQ-KLMHHEWLGAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGG 99
H G+ + E + +H G+ A + P GGGGG GG GGG
Sbjct: 16 HGGSLHVEPKYSALHSTSPGSSAPIAPSASSPSSSSNAGGGGGGGGGG---------GGG 66
Query: 100 TGRADD-------GGGG-----------------GGFHARLVHQGAAHAGA-AWAQGSTA 134
GR+ GGGG GG L+ + A A +Q +
Sbjct: 67 GGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSH 126
Query: 135 HHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHED 194
HH P SP + H + + A+ ++ A G HH H
Sbjct: 127 HHHPPHHSPFKPDATYHTMNTIPCTSAAS---SSSVPISHPSALAGTHHHHHHHHHHHHQ 183
Query: 195 GHEAQ----LEP-SPPPHLGAHG-----------HAHGHAHAGGLHAAA---AHLHPGAG 235
H+A LE SP LGA HA A +H AA AH H
Sbjct: 184 PHQALEGELLEHLSPGLALGAMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAH---- 239
Query: 236 GGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL----YGNVFSQT 291
G S +G SD DA D LE FA++FKQRRIKLG TQADVG AL L G++ SQ+
Sbjct: 240 GLPSHMGCMSDVDADPRD-LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSL-SQS 297
Query: 292 TICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVK 351
TICRFE+L LS NM LKP+L WLEE + S ++ K++KRTSI K
Sbjct: 298 TICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEK 357
Query: 352 GALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAG 402
+LE++F P+PS+ +I +A+ L L+K VVRVWFCN+RQK+KRM +AG
Sbjct: 358 RSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAG 408
Score = 31.6 bits (70), Expect = 1.5
Identities = 30/111 (27%), Positives = 38/111 (34%), Gaps = 4/111 (3%)
Query: 337 GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKR 396
GR +S G G+ P P ++ GL +SL E + + K
Sbjct: 68 GRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSHH 127
Query: 397 MTPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAAL---HHHHHH 444
P + P D Y P AS S P P A HHHHHH
Sbjct: 128 HHPPHHSPFKP-DATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHH 177
>gi|4505965 POU class 4 homeobox 3 [Homo sapiens]
Length = 338
Score = 155 bits (393), Expect = 5e-38
Identities = 100/237 (42%), Positives = 132/237 (55%), Gaps = 31/237 (13%)
Query: 188 HHALHEDGHEAQLEPSPPPHLGAHG-------------HAHGHAHAGGLHAAAAHLHPGA 234
HHA+H+ G E L P L G H H G LH A HP
Sbjct: 108 HHAVHQ-GLEGDLLEHISPTLSVSGLGAPEHSVMPAQIHPHHLGAMGHLHQAMGMSHP-- 164
Query: 235 GGGGSSVGEHSDEDAPSSD------DLEQFAKQFKQRRIKLGFTQADVGLALGTL----Y 284
+V HS A SD +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 165 ----HTVAPHSAMPACLSDVESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGV 220
Query: 285 GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRT 344
G++ SQ+TICRFE+L LS NM LKP+L WLEE +++ + ++ +++KRT
Sbjct: 221 GSL-SQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGSERKRKRT 279
Query: 345 SIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
SI K +LE++F P+PS+ +I +A+ L L+K VVRVWFCN+RQK+KRM +A
Sbjct: 280 SIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 336
>gi|23463326 POU domain class 5, transcription factor 2 [Homo
sapiens]
Length = 328
Score = 139 bits (350), Expect = 5e-33
Identities = 75/167 (44%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 254 DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 313
+L+Q AK+ +Q+R+ LG++QADVG+A+G L+G V SQTTICRFEA QLS NM KL+PLL
Sbjct: 125 ELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLL 184
Query: 314 NKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLA 373
KWL+E ++ + ++ Q + +R S E + +LE F +CPKP+ +I+ +A
Sbjct: 185 KKWLKEVEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIA 244
Query: 374 DSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG 420
LQL+K+VVRVWF NR + R T A P + V G PG
Sbjct: 245 GCLQLQKDVVRVWFYNRSKMGSRPTNDAS----PREIVGTAGPPCPG 287
>gi|223890225 POU class 6 homeobox 1 [Homo sapiens]
Length = 301
Score = 127 bits (320), Expect = 2e-29
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 246 DEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKN 305
DED + +++ +FAK FK RR+ LG TQ VG AL G +SQ+ ICRFE L ++ K+
Sbjct: 138 DEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKS 197
Query: 306 MCKLKPLLNKWLEETD--SSSGSPTNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCP 362
KLKP+L KWL E + + G ++ + + +KRK+RTS AL ++F K P
Sbjct: 198 AQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNP 257
Query: 363 KPSAHEITGLADSLQLEKEVVRVWFCNRRQKEK 395
P+ EIT +A L ++EVVRVWFCNRRQ K
Sbjct: 258 LPTGQEITEIAKELNYDREVVRVWFCNRRQTLK 290
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 101 bits (251), Expect = 2e-21
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 46/209 (22%)
Query: 248 DAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR------------ 295
D + +++ +FAK FK RR+ LG TQ VG AL G +SQ+ ICR
Sbjct: 477 DGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQ 536
Query: 296 ------------------------FEALQLSFKNMCKLKPLLNKWLEETDSS--SGSPTN 329
FE L ++ K+ K+KP+L +W+ E ++ +G
Sbjct: 537 EAQENTIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRAGMQNL 596
Query: 330 LDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFC 388
+ I ++ +KRK+RTS L +HF K PS E+T +A+ L ++EVVRVWFC
Sbjct: 597 TEFIGSEPSKKRKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFC 656
Query: 389 NRRQ-------KEKRMTPAAGAGHPPMDD 410
N+RQ + K+ PA P+ D
Sbjct: 657 NKRQALKNTIKRLKQHEPATAVPLEPLTD 685
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 72.0 bits (175), Expect = 1e-12
Identities = 67/224 (29%), Positives = 84/224 (37%), Gaps = 48/224 (21%)
Query: 11 GPGGGAG------------GTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWL 58
GPGG AG G G +MH +AAAA A + + L H +
Sbjct: 185 GPGGRAGPCFDQHGGQQSPGMG-MMHSASAAAAGAPGSMDPLQNS----------HEGYP 233
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVH 118
+ H G + P GGGGGG GG G GGGG G A GG G G A
Sbjct: 234 NSQCNHYPGYSRPG---AGGGGGGGGGGGG----GSGGGGGGGGAGAGGAGAGAVAAAAA 286
Query: 119 QGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAA 178
AA AG G G + SP GG G GGGG A + A
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG-----------GMMMGPGGGGAASLSKA 335
Query: 179 GGGGAGPGLHHALHEDGHEA-------QLEPSPPPHLGAHGHAH 215
G A G ++ H + QL SP P + ++G ++
Sbjct: 336 AAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSY 379
Score = 57.4 bits (137), Expect = 3e-08
Identities = 75/248 (30%), Positives = 88/248 (35%), Gaps = 55/248 (22%)
Query: 11 GPGGGAGGTGPLMHP-------DAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAG 63
G GGGA GP M D+AA A L + + E G
Sbjct: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
Query: 64 HP----VGLAHPQWLPTGGGGGGDWAGGPHLEH-----GKAGGGGTGRA----DDGGGGG 110
HP +G P GGGGG A P + A GG GRA D GG
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGP--AAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ 201
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGG 170
++H +A A AA A GS M P + G+ Y + PG GGG
Sbjct: 202 SPGMGMMH--SASAAAAGAPGS--------MDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251
Query: 171 GLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 230
G G GGGG+G G G G G A AG + AAAA
Sbjct: 252 GGGG--GGGGGGSGGGG---------------------GGGGAGAGGAGAGAVAAAAAAA 288
Query: 231 HPGAGGGG 238
AGGGG
Sbjct: 289 AAAAGGGG 296
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/239 (26%), Positives = 77/239 (32%), Gaps = 64/239 (26%)
Query: 7 YLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPV 66
Y G GGG GG G + AGA GAGAG
Sbjct: 243 YSRPGAGGGGGGGG-------GGGGGSGGGGGGGGAGAG-------------GAGAGAVA 282
Query: 67 GLAHPQWLPTGGGGGGDWAG--------------GPHLEHGKAGGGGT--GRADDGGGGG 110
A GGGGGG + G G + G GGG +A G G
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQ----------PLGLYA 160
GF R Q +GA T + L + SP + GG P+ P +
Sbjct: 343 GFQ-RFAGQNQHPSGAT----PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPGL----------HHALHEDGHEAQLEPSPPPHLG 209
QAA G G G AA G G G + A + H A +P P +G
Sbjct: 398 QAAAAGAAAG---GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Score = 43.1 bits (100), Expect = 5e-04
Identities = 56/187 (29%), Positives = 64/187 (34%), Gaps = 34/187 (18%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHH 136
GG GGG GP +E + GG A GG L+ + A G A
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAA--GGQADPPGPPLLSKPGDEDDAPPKMGEPAG- 139
Query: 137 LGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLA--------GMLAAGGGGAGPGLH 188
G P GA G QP A PGGGGG A G A G GPG
Sbjct: 140 -GRYEHPGLGALGTQQP-------PVAVPGGGGGPAAVPEFNNYYGSAAPASG--GPGGR 189
Query: 189 HALHEDGHEAQLEPSPPPHLGAHGHAHG---------HAHAGGLHAAAAHL----HPGAG 235
D H Q P A A G ++H G ++ H PGAG
Sbjct: 190 AGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
Query: 236 GGGSSVG 242
GGG G
Sbjct: 250 GGGGGGG 256
Score = 30.8 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 202 PSPPPHLGAHGHAHGHAHAGGLHAAAAHLH 231
P+ PPH H H H H H H A HLH
Sbjct: 18 PAAPPHQQHHHHHHAHHH----HHHAHHLH 43
Score = 30.0 bits (66), Expect = 4.5
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPG------LHHALHEDGHEAQLEPSPPPHLGAHGHA 214
Q +P L G AGGG PG H + Q +P PP L G
Sbjct: 71 QQQHPISNNNSLGG---AGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE 127
Query: 215 HGHAHAGGLHAAAAHLHPGAGGGGS 239
G A + HPG G G+
Sbjct: 128 DDAPPKMGEPAGGRYEHPGLGALGT 152
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 72.0 bits (175), Expect = 1e-12
Identities = 67/224 (29%), Positives = 84/224 (37%), Gaps = 48/224 (21%)
Query: 11 GPGGGAG------------GTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWL 58
GPGG AG G G +MH +AAAA A + + L H +
Sbjct: 185 GPGGRAGPCFDQHGGQQSPGMG-MMHSASAAAAGAPGSMDPLQNS----------HEGYP 233
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVH 118
+ H G + P GGGGGG GG G GGGG G A GG G G A
Sbjct: 234 NSQCNHYPGYSRPG---AGGGGGGGGGGGG----GSGGGGGGGGAGAGGAGAGAVAAAAA 286
Query: 119 QGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAA 178
AA AG G G + SP GG G GGGG A + A
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG-----------GMMMGPGGGGAASLSKA 335
Query: 179 GGGGAGPGLHHALHEDGHEA-------QLEPSPPPHLGAHGHAH 215
G A G ++ H + QL SP P + ++G ++
Sbjct: 336 AAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSY 379
Score = 57.4 bits (137), Expect = 3e-08
Identities = 75/248 (30%), Positives = 88/248 (35%), Gaps = 55/248 (22%)
Query: 11 GPGGGAGGTGPLMHP-------DAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAG 63
G GGGA GP M D+AA A L + + E G
Sbjct: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
Query: 64 HP----VGLAHPQWLPTGGGGGGDWAGGPHLEH-----GKAGGGGTGRA----DDGGGGG 110
HP +G P GGGGG A P + A GG GRA D GG
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGP--AAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ 201
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGG 170
++H +A A AA A GS M P + G+ Y + PG GGG
Sbjct: 202 SPGMGMMH--SASAAAAGAPGS--------MDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251
Query: 171 GLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 230
G G GGGG+G G G G G A AG + AAAA
Sbjct: 252 GGGG--GGGGGGSGGGG---------------------GGGGAGAGGAGAGAVAAAAAAA 288
Query: 231 HPGAGGGG 238
AGGGG
Sbjct: 289 AAAAGGGG 296
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/239 (26%), Positives = 77/239 (32%), Gaps = 64/239 (26%)
Query: 7 YLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPV 66
Y G GGG GG G + AGA GAGAG
Sbjct: 243 YSRPGAGGGGGGGG-------GGGGGSGGGGGGGGAGAG-------------GAGAGAVA 282
Query: 67 GLAHPQWLPTGGGGGGDWAG--------------GPHLEHGKAGGGGT--GRADDGGGGG 110
A GGGGGG + G G + G GGG +A G G
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQ----------PLGLYA 160
GF R Q +GA T + L + SP + GG P+ P +
Sbjct: 343 GFQ-RFAGQNQHPSGAT----PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPGL----------HHALHEDGHEAQLEPSPPPHLG 209
QAA G G G AA G G G + A + H A +P P +G
Sbjct: 398 QAAAAGAAAG---GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Score = 43.1 bits (100), Expect = 5e-04
Identities = 56/187 (29%), Positives = 64/187 (34%), Gaps = 34/187 (18%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHH 136
GG GGG GP +E + GG A GG L+ + A G A
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAA--GGQADPPGPPLLSKPGDEDDAPPKMGEPAG- 139
Query: 137 LGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLA--------GMLAAGGGGAGPGLH 188
G P GA G QP A PGGGGG A G A G GPG
Sbjct: 140 -GRYEHPGLGALGTQQP-------PVAVPGGGGGPAAVPEFNNYYGSAAPASG--GPGGR 189
Query: 189 HALHEDGHEAQLEPSPPPHLGAHGHAHG---------HAHAGGLHAAAAHL----HPGAG 235
D H Q P A A G ++H G ++ H PGAG
Sbjct: 190 AGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
Query: 236 GGGSSVG 242
GGG G
Sbjct: 250 GGGGGGG 256
Score = 30.8 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 202 PSPPPHLGAHGHAHGHAHAGGLHAAAAHLH 231
P+ PPH H H H H H H A HLH
Sbjct: 18 PAAPPHQQHHHHHHAHHH----HHHAHHLH 43
Score = 30.0 bits (66), Expect = 4.5
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPG------LHHALHEDGHEAQLEPSPPPHLGAHGHA 214
Q +P L G AGGG PG H + Q +P PP L G
Sbjct: 71 QQQHPISNNNSLGG---AGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE 127
Query: 215 HGHAHAGGLHAAAAHLHPGAGGGGS 239
G A + HPG G G+
Sbjct: 128 DDAPPKMGEPAGGRYEHPGLGALGT 152
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 72.0 bits (175), Expect = 1e-12
Identities = 67/224 (29%), Positives = 84/224 (37%), Gaps = 48/224 (21%)
Query: 11 GPGGGAG------------GTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWL 58
GPGG AG G G +MH +AAAA A + + L H +
Sbjct: 185 GPGGRAGPCFDQHGGQQSPGMG-MMHSASAAAAGAPGSMDPLQNS----------HEGYP 233
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVH 118
+ H G + P GGGGGG GG G GGGG G A GG G G A
Sbjct: 234 NSQCNHYPGYSRPG---AGGGGGGGGGGGG----GSGGGGGGGGAGAGGAGAGAVAAAAA 286
Query: 119 QGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAA 178
AA AG G G + SP GG G GGGG A + A
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG-----------GMMMGPGGGGAASLSKA 335
Query: 179 GGGGAGPGLHHALHEDGHEA-------QLEPSPPPHLGAHGHAH 215
G A G ++ H + QL SP P + ++G ++
Sbjct: 336 AAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSY 379
Score = 57.4 bits (137), Expect = 3e-08
Identities = 75/248 (30%), Positives = 88/248 (35%), Gaps = 55/248 (22%)
Query: 11 GPGGGAGGTGPLMHP-------DAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAG 63
G GGGA GP M D+AA A L + + E G
Sbjct: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
Query: 64 HP----VGLAHPQWLPTGGGGGGDWAGGPHLEH-----GKAGGGGTGRA----DDGGGGG 110
HP +G P GGGGG A P + A GG GRA D GG
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGP--AAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ 201
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGG 170
++H +A A AA A GS M P + G+ Y + PG GGG
Sbjct: 202 SPGMGMMH--SASAAAAGAPGS--------MDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251
Query: 171 GLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 230
G G GGGG+G G G G G A AG + AAAA
Sbjct: 252 GGGG--GGGGGGSGGGG---------------------GGGGAGAGGAGAGAVAAAAAAA 288
Query: 231 HPGAGGGG 238
AGGGG
Sbjct: 289 AAAAGGGG 296
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/239 (26%), Positives = 77/239 (32%), Gaps = 64/239 (26%)
Query: 7 YLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPV 66
Y G GGG GG G + AGA GAGAG
Sbjct: 243 YSRPGAGGGGGGGG-------GGGGGSGGGGGGGGAGAG-------------GAGAGAVA 282
Query: 67 GLAHPQWLPTGGGGGGDWAG--------------GPHLEHGKAGGGGT--GRADDGGGGG 110
A GGGGGG + G G + G GGG +A G G
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 111 GFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQ----------PLGLYA 160
GF R Q +GA T + L + SP + GG P+ P +
Sbjct: 343 GFQ-RFAGQNQHPSGAT----PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPGL----------HHALHEDGHEAQLEPSPPPHLG 209
QAA G G G AA G G G + A + H A +P P +G
Sbjct: 398 QAAAAGAAAG---GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Score = 43.1 bits (100), Expect = 5e-04
Identities = 56/187 (29%), Positives = 64/187 (34%), Gaps = 34/187 (18%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHH 136
GG GGG GP +E + GG A GG L+ + A G A
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAA--GGQADPPGPPLLSKPGDEDDAPPKMGEPAG- 139
Query: 137 LGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLA--------GMLAAGGGGAGPGLH 188
G P GA G QP A PGGGGG A G A G GPG
Sbjct: 140 -GRYEHPGLGALGTQQP-------PVAVPGGGGGPAAVPEFNNYYGSAAPASG--GPGGR 189
Query: 189 HALHEDGHEAQLEPSPPPHLGAHGHAHG---------HAHAGGLHAAAAHL----HPGAG 235
D H Q P A A G ++H G ++ H PGAG
Sbjct: 190 AGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
Query: 236 GGGSSVG 242
GGG G
Sbjct: 250 GGGGGGG 256
Score = 30.8 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 202 PSPPPHLGAHGHAHGHAHAGGLHAAAAHLH 231
P+ PPH H H H H H H A HLH
Sbjct: 18 PAAPPHQQHHHHHHAHHH----HHHAHHLH 43
Score = 30.0 bits (66), Expect = 4.5
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 161 QAAYPGGGGGGLAGMLAAGGGGAGPG------LHHALHEDGHEAQLEPSPPPHLGAHGHA 214
Q +P L G AGGG PG H + Q +P PP L G
Sbjct: 71 QQQHPISNNNSLGG---AGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE 127
Query: 215 HGHAHAGGLHAAAAHLHPGAGGGGS 239
G A + HPG G G+
Sbjct: 128 DDAPPKMGEPAGGRYEHPGLGALGT 152
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 62.4 bits (150), Expect = 8e-10
Identities = 103/378 (27%), Positives = 125/378 (33%), Gaps = 113/378 (29%)
Query: 95 AGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASG----G 150
A GTG GGGGGG A G T+ PA S P A
Sbjct: 36 AAASGTG---GGGGGGG-----------------ASGGTSGSCSPASSEPPAAPADRLRA 75
Query: 151 HQPQPLGLYAQ--AAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 208
P P L A A P G L AGGGG G G
Sbjct: 76 ESPSPPRLLAAHCALLPK------PGFLGAGGGGGGTG---------------------- 107
Query: 209 GAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIK 268
G HG H HAH G AAAA A GG ++G H
Sbjct: 108 GGHGGPHHHAHPGAAAAAAAAA-AAAAAGGLALGLHP----------------------- 143
Query: 269 LGFTQADVGL-ALGTLYGN-VFSQTTIC-------RFEALQLSFKNMCKLKPL------- 312
G Q GL A LYG+ V+ + + AL S+ + P
Sbjct: 144 -GGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIK 202
Query: 313 -------LNKWLEETDSSSGSPTNLD-KIAAQ----GRKRKKRTSIEVGVKGALESHFLK 360
L++WL + + P D AQ G+ R+ RT+ LE F
Sbjct: 203 LGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKL 262
Query: 361 CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG 420
S + +A SL L + V++WF NRR K KR A + G G G
Sbjct: 263 NKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGG-GAG 321
Query: 421 GGGASPPSA-----PPPP 433
GGA P A PP P
Sbjct: 322 KGGAEEPGAEELLGPPAP 339
Score = 57.0 bits (136), Expect = 3e-08
Identities = 60/200 (30%), Positives = 74/200 (37%), Gaps = 40/200 (20%)
Query: 11 GPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPVGLAH 70
G GG +GGT P A++ AA A+RL A + +L+ A H L
Sbjct: 46 GGGGASGGTSGSCSP--ASSEPPAAPADRLRAESP--SPPRLL--------AAHCALLPK 93
Query: 71 PQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQ 130
P +L GGGGGG GGG GG H H GAA A AA A
Sbjct: 94 PGFLGAGGGGGGT----------------------GGGHGGPHHH-AHPGAAAAAAAAAA 130
Query: 131 GSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHA 190
+ A L + P G P LY Y G A AA G P L ++
Sbjct: 131 AAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVY-----GYSAAAAAAALAGQHPALSYS 185
Query: 191 LHEDGHEAQLEPSPPPHLGA 210
+ P+ P LGA
Sbjct: 186 YPQVQGAHPAHPADPIKLGA 205
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 62.0 bits (149), Expect = 1e-09
Identities = 68/241 (28%), Positives = 73/241 (30%), Gaps = 59/241 (24%)
Query: 10 RGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPVGLA 69
RG GG G GP R H G H G G G +G
Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGG--MGSG 780
Query: 70 HPQWLPTGGGGGGDWAGGPHLEHGKAGGG---GTGRADDGGGGGGFHARLVHQGAAHAGA 126
H P G GG GG H H GGG G+G G GGG
Sbjct: 781 HR---PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGM-------------- 823
Query: 127 AWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLA-AGGGGAGP 185
GA GGH+P PGG GG G G G GP
Sbjct: 824 -------------------GAGGGHRPH--------EGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 186 GLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHS 245
H GH PPPH H G H GG H G GG S G+ S
Sbjct: 857 HGHRPHDVPGHRGHDHRGPPPH--EHRGHDGPGHGGGGHR-------GHDGGHSHGGDMS 907
Query: 246 D 246
+
Sbjct: 908 N 908
Score = 57.4 bits (137), Expect = 3e-08
Identities = 73/280 (26%), Positives = 95/280 (33%), Gaps = 53/280 (18%)
Query: 9 PRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREV--QKLMHHEWLGAGAGHPV 66
P+GPGGG ++ + + + +E L Y + Q L+ H LG G P+
Sbjct: 571 PQGPGGGGINVQEIL--TSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPG---PI 625
Query: 67 GLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGA 126
P GG GG ++H G GG GG GG RL+ G
Sbjct: 626 A----NGFPPGGPGGPKG-----MQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGG 676
Query: 127 AWAQGSTAHHL-------GPAMSPSP-----GASGGHQPQP--------LGLYAQAAYPG 166
+ GP P P G GG++P P G + P
Sbjct: 677 DPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPN 736
Query: 167 GGGGGLAGMLAAG--------GGGAGPGLHHALHE-------DGHEAQLEPSPPPHLGAH 211
G GG GM+ G GGG G H HE GH P G
Sbjct: 737 GRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMG-GGG 795
Query: 212 GHAHGHAHAGGLHAAAAHL-HPGAGGGGSSVGEHSDEDAP 250
GH GG+ + H H G GGG + G H + P
Sbjct: 796 GHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGP 835
Score = 53.9 bits (128), Expect = 3e-07
Identities = 72/258 (27%), Positives = 83/258 (32%), Gaps = 46/258 (17%)
Query: 6 QYLPRGPGGGA----GGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAG 61
Q+ P GPGG GG G + P + G M + G
Sbjct: 641 QHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPG-----DPMRGGPMRGG 695
Query: 62 AGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGG---GG--TGRADDGGG--GGGFHA 114
G G P GG GG + P G GG GG GR GGG GGG H
Sbjct: 696 PGPGPG---PYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHR 752
Query: 115 RLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGG--GGGGL 172
H G G+++ H P P G GH+P PGG GGGG
Sbjct: 753 -------PHEGPGGGMGNSSGHR-PHEGPGGGMGSGHRPHE--------GPGGSMGGGGG 796
Query: 173 AGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHP 232
GGG G H HE P +GA G H GG + P
Sbjct: 797 HRPHEGPGGGISGGSGHRPHE---------GPGGGMGAGGGHRPHEGPGGSMGGSGGHRP 847
Query: 233 GAGGGGSSVGEHSDEDAP 250
G G H D P
Sbjct: 848 HEGPGHGGPHGHRPHDVP 865
Score = 49.3 bits (116), Expect = 7e-06
Identities = 61/235 (25%), Positives = 71/235 (30%), Gaps = 59/235 (25%)
Query: 75 PTGGGGGGDWAGG---PHLEHGKAGGGGTGRADDGGGGGGFHAR---------------- 115
P G GG D AGG P + G G G+ G GGGG + +
Sbjct: 539 PGGSGGSPDGAGGSKLPPVLANLMGSMGAGKGPQGPGGGGINVQEILTSIMGSPNSHPSE 598
Query: 116 ---------------LVHQGAAHAGAAWAQGSTAHHLGP-AMSPSPGASGGHQPQPLG-- 157
LV G G GP M P GG P P G
Sbjct: 599 ELLKQPDYSDKIKQMLVPHGLLGPGPIANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGP 658
Query: 158 -------LYAQAAYPGGG-------GGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPS 203
L P GG G + G GG G GPG +H + P
Sbjct: 659 GGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPP 718
Query: 204 PPPHLGAHGHAHG-------HAHAGGLHAAAAHL-HPGAGGGGSSVGEHSDEDAP 250
PPP GA G G GG+ H H G GGG + H + P
Sbjct: 719 PPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGP 773
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 62.0 bits (149), Expect = 1e-09
Identities = 73/231 (31%), Positives = 89/231 (38%), Gaps = 60/231 (25%)
Query: 3 TTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLM-----HHEW 57
T A +GP G G +H AAAAAAAAAA+ ++ V ++ H +
Sbjct: 150 TLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTT--RVGSMLPGLPYHLQG 207
Query: 58 LGAG-AGHPVGL-AHPQW-------LPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGG 108
G+G A H G AHP W P G GGG AGG G AG GG G A
Sbjct: 208 SGSGPANHAGGAGAHPGWPQASADSPPYGSGGGA--AGG-----GAAGPGGAGSA----- 255
Query: 109 GGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGG 168
AAH A + SPSP + G +P G A + GG
Sbjct: 256 ------------AAHVSARF-----------PYSPSPPMANGAAREPGGYAAAGSGGAGG 292
Query: 169 GGGLAGMLAAGGG--------GAGPGLHHALHEDGHEAQLEPSP-PPHLGA 210
G LAA GG A L+ H H PSP P++GA
Sbjct: 293 VSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGA 343
Score = 53.1 bits (126), Expect = 5e-07
Identities = 77/283 (27%), Positives = 91/283 (32%), Gaps = 85/283 (30%)
Query: 10 RGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPVGLA 69
RGPGG + P + +AAA A + L + A HP G
Sbjct: 52 RGPGGASNCGTPQLDTEAAAGPPARSLL--------------------LSSYASHPFGAP 91
Query: 70 HPQWLPTGGGGGGD-----------------------WAGG------------PHLEHGK 94
H P G GG+ W+ +
Sbjct: 92 HGPSAPGVAGPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTL 151
Query: 95 AGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAH---------------HLGP 139
A G A G GGF VH AA A AA A S + HL
Sbjct: 152 AALSSQGPAAYDGAPGGF----VHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQG 207
Query: 140 AMSPSPGASGGHQPQPLGLYAQA-AYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEA 198
+ S +GG P A A + P G GGG AG AAG GGAG H
Sbjct: 208 SGSGPANHAGGAGAHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHV----SARF 263
Query: 199 QLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSV 241
PSPP GA G+A AG A G GGGSS+
Sbjct: 264 PYSPSPPMANGAAREPGGYAAAGSGGAG------GVSGGGSSL 300
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 62.0 bits (149), Expect = 1e-09
Identities = 73/242 (30%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 75 PTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTA 134
P GGGGG GG + G A G +G GG G A W G
Sbjct: 73 PGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSG--------KPALEDLYWMSGYQ- 123
Query: 135 HHLGP-AMSPSPGAS------GGHQPQPLGLY---AQAAYPGGGGGGLAGMLAAGGGGA- 183
HHL P A++ +P + GH G + A AAY G G AG GGGA
Sbjct: 124 HHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAG-----GGGAD 178
Query: 184 --GPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSV 241
G G HH H H H AH H H H H H GAG GG +
Sbjct: 179 DMGAGHHHGAHHAAHH---------HHAAHHHHHHHHH-----------HGGAGHGGGAG 218
Query: 242 GEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADV---GLALGTLYGNVFSQTTICRFEA 298
E+ S D L + + R+++ GF++ +V TL ++Q+ CRF+
Sbjct: 219 HHVRLEERFSDDQLVSMSVRELNRQLR-GFSKEEVIRLKQKRRTLKNRGYAQS--CRFKR 275
Query: 299 LQ 300
+Q
Sbjct: 276 VQ 277
Score = 37.4 bits (85), Expect = 0.028
Identities = 49/159 (30%), Positives = 57/159 (35%), Gaps = 33/159 (20%)
Query: 11 GPGGGAGGTG-----------PLMHPDAAAAAAAAAAAERLHAGAAYR-----EVQKLMH 54
G GGGAGG G P P A + A E L+ + Y+ E L
Sbjct: 76 GGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTP 135
Query: 55 HEWLGA--GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGF 112
+ + A G+GH G H P + G G AGGGG ADD G G
Sbjct: 136 EDAVEALIGSGHH-GAHHGAHHPAAAAAYEAFRG-----PGFAGGGG---ADDMGAG--- 183
Query: 113 HARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGH 151
H H A H AA HH G A G GH
Sbjct: 184 HHHGAHHAAHHHHAAHHHHHHHHHHGGA---GHGGGAGH 219
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 61.2 bits (147), Expect = 2e-09
Identities = 42/122 (34%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHH 136
GG GGG + GG GGG +G GGG GG H G + G + GS+
Sbjct: 462 GGRGGGSFGGG-------YGGGSSGGGSSGGGHGGGHGG--SSGGGYGGGSSGGGSSGGG 512
Query: 137 LGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGH 196
G S SGGH G Y + GGGGGG G + GG +G G GH
Sbjct: 513 YGGGSS-----SGGHGGSSSGGYGGGS-SGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGH 566
Query: 197 EA 198
++
Sbjct: 567 KS 568
Score = 44.3 bits (103), Expect = 2e-04
Identities = 40/127 (31%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 76 TGGGGGGDWAGG----PHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQG 131
+GGGGGG GG L + G G GG GG +R G G++ G
Sbjct: 16 SGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYG 75
Query: 132 STAHHLGPAMSPSPGAS--GGHQPQPLGLYAQAAYPGGG-GGGLAGMLAAGGGGAGPGLH 188
G + S G+S GG G + ++ GG GGG G GGGG G G
Sbjct: 76 GLGGFGGGSFRGSYGSSSFGGSYG---GSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFG 132
Query: 189 HALHEDG 195
DG
Sbjct: 133 GGFGGDG 139
Score = 43.5 bits (101), Expect = 4e-04
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLE-HGKAGGGGTGRADDGGGGGGFHARLV 117
G G G G + GG GG + GG HG + GG G GGGGGG+
Sbjct: 488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGG-S 546
Query: 118 HQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQ 154
G + +G + GS++ + S S G S P+
Sbjct: 547 SGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPR 583
Score = 33.5 bits (75), Expect = 0.40
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 158 LYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGH 217
L + + GGG GG + GGG +G G S H G HG + G
Sbjct: 453 LEGEGSSGGGGRGGGSFGGGYGGGSSGGG---------------SSGGGHGGGHGGSSGG 497
Query: 218 AHAGGLHAAAAHLHPGAGGGGSSVGEH 244
+ GG ++ G GGGSS G H
Sbjct: 498 GYGGG--SSGGGSSGGGYGGGSSSGGH 522
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 59.3 bits (142), Expect = 7e-09
Identities = 43/112 (38%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHH 136
GGGG G W GG GGGG GR GGGGGG+ G G W G
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWG------GGGGGGGGWGGGGGGGR 384
Query: 137 LGPAMSPSPGASGGHQPQPLGLYAQAAY--PGGGGGGLAGMLAAGGGGAGPG 186
G G GG+ + G Y Y P GGGGG GGGG G G
Sbjct: 385 GGFQGRGDYGGRGGYGGR--GGYGGRGYGDPYGGGGG-------GGGGGGGG 427
Score = 50.4 bits (119), Expect = 3e-06
Identities = 46/130 (35%), Positives = 47/130 (36%), Gaps = 38/130 (29%)
Query: 57 WLGAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARL 116
W G G G G GGGG G W GG G GGGG G GGGGGG R
Sbjct: 338 WGGGGGGGGRGGGG------GGGGRGGWGGG----GGGWGGGGGGGGGWGGGGGG--GRG 385
Query: 117 VHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGML 176
QG G G + G G P Y GGGGGG
Sbjct: 386 GFQGRGDYGGRGGYGGRGGY---------GGRGYGDP----------YGGGGGGG----- 421
Query: 177 AAGGGGAGPG 186
GGGG G G
Sbjct: 422 --GGGGGGGG 429
Score = 38.5 bits (88), Expect = 0.013
Identities = 42/155 (27%), Positives = 50/155 (32%), Gaps = 54/155 (34%)
Query: 88 PHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGA 147
P + + GGGG G GGGGGG G G G G
Sbjct: 323 PPWQKRQEGGGGRGGWGGGGGGGG------RGGGGGGGGRGGWG--------------GG 362
Query: 148 SGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPH 207
GG GGGGGG G GGGG G G + +
Sbjct: 363 GGGW--------------GGGGGGGGGWGGGGGGGRG----------GFQGR-------- 390
Query: 208 LGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVG 242
G +G G+ GG + + P GGGG G
Sbjct: 391 -GDYGGRGGYGGRGG-YGGRGYGDPYGGGGGGGGG 423
Score = 33.5 bits (75), Expect = 0.40
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 25/64 (39%)
Query: 77 GGGGGGDWAGGP---------HLEHGKAGG----------------GGTGRADDGGGGGG 111
GGGGGG W GG ++G GG GG G GGGGGG
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGGG 428
Query: 112 FHAR 115
+ R
Sbjct: 429 GYRR 432
Score = 29.6 bits (65), Expect = 5.8
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 166 GGGGGGLAGMLAAGGG-GAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLH 224
GGGGGG G GGG G G G G + G G G GG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRG 409
Query: 225 AAAAHLHPGAGGGGSSVG 242
+ G GGGG G
Sbjct: 410 YGDPYGGGGGGGGGGGGG 427
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 58.5 bits (140), Expect = 1e-08
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 32/142 (22%)
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGD-------WAGGPHLEHGKAGGGGTGRADDGGGGGG 111
G G+G + ++ ++ +GGGGGG + GG G+ GGG G + GG GGG
Sbjct: 21 GLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGG 80
Query: 112 FHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGG 171
F A + G G + G + G S S G GG + GG GGG
Sbjct: 81 FSASSL--GGGFGGGSRGFGGAS---GGGYSSSGGFGGG-------------FGGGSGGG 122
Query: 172 LAGMLAAG-------GGGAGPG 186
G +G GGGAG G
Sbjct: 123 FGGGYGSGFGGFGGFGGGAGGG 144
Score = 54.3 bits (129), Expect = 2e-07
Identities = 52/170 (30%), Positives = 63/170 (37%), Gaps = 26/170 (15%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGS-TAH 135
GG GG G G GGGG+G GG GGG +R G+ G+ GS +
Sbjct: 479 GGSGGSYGRGSRGGSGGSYGGGGSG----GGYGGGSGSRGGSGGSYGGGSGSGGGSGGGY 534
Query: 136 HLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDG 195
G S G+ GGH G Y + GGG GG GGG G H G
Sbjct: 535 GGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG-----GYGGGSGSRGGSGGSHGGG 589
Query: 196 HEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHS 245
G G ++ GG A+ + G GGGS HS
Sbjct: 590 -------------SGFGGESGGSYGGGEEASGS---GGGYGGGSGKSSHS 623
Score = 46.6 bits (109), Expect = 5e-05
Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 16/130 (12%)
Query: 59 GAGAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVH 118
G+G+ G ++ +GGG GG + GG G GG+G GG GG +
Sbjct: 509 GSGSRGGSGGSYGGGSGSGGGSGGGYGGG----SGGGHSGGSGGGHSGGSGGNYGGGSGS 564
Query: 119 QGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAA 178
G + G GS G SGG G ++ GGG +G
Sbjct: 565 GGGSGGGYGGGSGSR------------GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGG 612
Query: 179 GGGGAGPGLH 188
GGG+G H
Sbjct: 613 YGGGSGKSSH 622
Score = 40.0 bits (92), Expect = 0.004
Identities = 38/149 (25%), Positives = 50/149 (33%), Gaps = 19/149 (12%)
Query: 94 KAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQP 153
++GGGG G GG ++R G G + S++ G S G GG
Sbjct: 13 RSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRF---SSSSGYGGGSSRVCGRGGG--- 66
Query: 154 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH 213
G + +Y GG GGG + GG G G G+ + G G
Sbjct: 67 ---GSFGY-SYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSS---------GGFGG 113
Query: 214 AHGHAHAGGLHAAAAHLHPGAGGGGSSVG 242
G GG G GG G G
Sbjct: 114 GFGGGSGGGFGGGYGSGFGGFGGFGGGAG 142
Score = 34.3 bits (77), Expect = 0.24
Identities = 37/150 (24%), Positives = 52/150 (34%), Gaps = 32/150 (21%)
Query: 4 TAQYLPRGPGGGAGGTGP----LMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLG 59
++ YL R GGG GG G +++ R + + Y + G
Sbjct: 7 SSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRV----CG 62
Query: 60 AGAGHPVGLAHPQWLPTGGGGGGDWA---------GGPHLEHGKAGGG---------GTG 101
G G G ++ GGG GG ++ GG G +GGG G G
Sbjct: 63 RGGGGSFGYSY------GGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFG 116
Query: 102 RADDGGGGGGFHARLVHQGAAHAGAAWAQG 131
GG GGG+ + G GA G
Sbjct: 117 GGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 77 GGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGG 111
GGG GG + GG G GG G G GGG GG
Sbjct: 116 GGGSGGGFGGGYGSGFGGFGGFGGGA---GGGDGG 147
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 57.0 bits (136), Expect = 3e-08
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 338 RKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRM 397
+ R+ RT+ ALE+ F S E LA SL L + V++WF NRR K K+
Sbjct: 162 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 221
Query: 398 TPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALH 439
P A PG G GGGG S S P PP ALH
Sbjct: 222 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGS-PGPPGTGALH 262
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 57.0 bits (136), Expect = 3e-08
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 338 RKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRM 397
+ R+ RT+ ALE+ F S E LA SL L + V++WF NRR K K+
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243
Query: 398 TPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALH 439
P A PG G GGGG S S P PP ALH
Sbjct: 244 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGS-PGPPGTGALH 284
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,904,555
Number of Sequences: 37866
Number of extensions: 1780813
Number of successful extensions: 28892
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 14789
Number of HSP's gapped (non-prelim): 8774
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.