POU5F1B 15477

Name: POU5F1B	Sequence: fasta or formatted (359aa)		NCBI GI: 227430410
Description: POU class 5 homeobox 1B		Referenced in: POU Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 21 2 C cysteine 2.5 9 1 D aspartate 2.5 9 1 E glutamate 7.5 27 2 F phenylalanine 4.7 17 1 G glycine 12.3 44 4 H histidine 1.4 5 1 I isoleucine 3.1 11 1 K lysine 5.8 21 1 L leucine 8.6 31 2 M methionine 1.4 5 1 N asparagine 3.3 12 2 P proline 11.1 40 3 Q glutamine 5.8 21 2 R arginine 3.6 13 2 S serine 7.2 26 3 T threonine 3.3 12 1 V valine 6.4 23 2 W tryptophan 1.7 6 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 POU class 5 homeobox 1B POU5F1 0.949 POU domain, class 5, transcription factor 1 isoform ... POU5F1 0.569 POU domain, class 5, transcription factor 1 isoform... POU5F2 0.317 POU domain class 5, transcription factor 2 POU3F1 0.236 POU domain, class 3, transcription factor 1 POU3F3 0.217 POU class 3 homeobox 3 POU3F4 0.216 POU domain, class 3, transcription factor 4 POU3F2 0.216 POU domain, class 3, transcription factor 2 POU2F1 0.192 POU class 2 homeobox 1 POU2F2 0.192 POU domain, class 2, transcription factor 2 POU2F3 0.188 POU transcription factor POU4F1 0.150 POU domain, class 4, transcription factor 1 POU1F1 0.147 pituitary specific transcription factor 1 isoform b... POU1F1 0.147 pituitary specific transcription factor 1 isoform alp... POU4F2 0.136 Brn3b POU domain transcription factor POU4F3 0.130 POU class 4 homeobox 3 POU6F1 0.114 POU class 6 homeobox 1 POU6F2 0.080 POU domain, class 6, transcription factor 2 LHX1 0.032 LIM homeobox protein 1 LHX5 0.030 LIM homeobox protein 5 NKX2-6 0.030 NK2 transcription factor related, locus 6 ARX 0.029 aristaless related homeobox LHX4 0.029 LIM homeobox protein 4 LHX3 0.027 LIM homeobox protein 3 isoform a LHX3 0.027 LIM homeobox protein 3 isoform b ARGFX 0.026 arginine-fifty homeobox HLX 0.025 H2.0-like homeobox OTUD5 0.025 OTU domain containing 5 isoform a OTUD5 0.025 OTU domain containing 5 isoform b OTUD5 0.025 OTU domain containing 5 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.