Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 167466207
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|167466207 intercellular adhesion molecule 3 precursor [Homo
sapiens]
(547 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|167466207 intercellular adhesion molecule 3 precursor [Homo s... 1102 0.0
gi|189571583 intercellular adhesion molecule 5 precursor [Homo s... 469 e-132
gi|167466198 intercellular adhesion molecule 1 precursor [Homo s... 462 e-130
gi|153082722 intercellular adhesion molecule 2 precursor [Homo s... 119 5e-27
gi|153082719 intercellular adhesion molecule 2 precursor [Homo s... 119 5e-27
gi|153082699 intercellular adhesion molecule 2 precursor [Homo s... 119 5e-27
gi|153082686 intercellular adhesion molecule 2 precursor [Homo s... 119 5e-27
gi|153082696 intercellular adhesion molecule 2 precursor [Homo s... 119 5e-27
gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor... 73 6e-13
gi|12545402 intercellular adhesion molecule 4 isoform 2 precurso... 73 6e-13
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 63 8e-10
gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens] 63 8e-10
gi|85068578 intercellular adhesion molecule 4 isoform 3 precurso... 56 1e-07
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens] 52 1e-06
gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Ho... 49 1e-05
gi|118572606 hemicentin 1 [Homo sapiens] 45 1e-04
gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Ho... 44 3e-04
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 44 5e-04
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 43 8e-04
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 43 8e-04
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 43 8e-04
gi|61742797 basal cell adhesion molecule isoform 2 precursor [Ho... 42 0.001
gi|31543106 basal cell adhesion molecule isoform 1 precursor [Ho... 42 0.001
gi|4827022 contactin 2 precursor [Homo sapiens] 41 0.002
gi|157168355 CD22 molecule [Homo sapiens] 41 0.002
gi|21686977 cell adhesion molecule 4 [Homo sapiens] 40 0.006
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 40 0.006
gi|5031927 skeletal muscle receptor tyrosine kinase [Homo sapiens] 39 0.012
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 39 0.016
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 39 0.016
>gi|167466207 intercellular adhesion molecule 3 precursor [Homo
sapiens]
Length = 547
Score = 1102 bits (2851), Expect = 0.0
Identities = 547/547 (100%), Positives = 547/547 (100%)
Query: 1 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS 60
MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS
Sbjct: 1 MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSS 60
Query: 61 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV 120
EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV
Sbjct: 61 EKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERV 120
Query: 121 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS 180
ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS
Sbjct: 121 ELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLAS 180
Query: 181 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD 240
RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD
Sbjct: 181 RDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD 240
Query: 241 CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG 300
CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG
Sbjct: 241 CTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGG 300
Query: 301 ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL 360
ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL
Sbjct: 301 ERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQL 360
Query: 361 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV 420
QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV
Sbjct: 361 QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHV 420
Query: 421 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE
Sbjct: 421 LQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
Query: 481 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG 540
AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG
Sbjct: 481 AGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREESTYLPLTSMQPTEAMG 540
Query: 541 EEPSRAE 547
EEPSRAE
Sbjct: 541 EEPSRAE 547
>gi|189571583 intercellular adhesion molecule 5 precursor [Homo
sapiens]
Length = 924
Score = 469 bits (1208), Expect = e-132
Identities = 240/460 (52%), Positives = 311/460 (67%), Gaps = 6/460 (1%)
Query: 27 VQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAAFNLS 86
V + F ++P+ + GGSL++NCST+CP E+ LETSL + G+ W A L
Sbjct: 29 VSQEPFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLV 88
Query: 87 NVTG-NSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTLRCQVEDGS 145
++ ++ +C C + I ++ P+RVEL PLPPWQPVG+NFTL C+V
Sbjct: 89 DIREPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAG 148
Query: 146 PRTSLTVVLLRWEEELSRQPAVEEP-----AEVTATVLASRDDHGAPFSCRTELDMQPQG 200
PR SLT+ LLR +EL R+ EP A +TATVLA R+DHGA FSCR ELD++P G
Sbjct: 149 PRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLRPHG 208
Query: 201 LGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVDCTLDGLFPASEAQVYLALGD 260
LGLF N+SAPR+LRTF L PRL APR LEV + PV CTLDGLFPASEA+VYLALGD
Sbjct: 209 LGLFENSSAPRELRTFSLSPDAPRLAAPRLLEVGSERPVSCTLDGLFPASEARVYLALGD 268
Query: 261 QMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVN 320
Q L+ V GD ATATATA A+QEGAR++VCNVTLGGE RE REN+T++SF P++
Sbjct: 269 QNLSPDVTLEGDAFVATATATASAEQEGARQLVCNVTLGGENRETRENVTIYSFPAPLLT 328
Query: 321 LSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSFFCSATLE 380
LSEP+ EG VTV+C AGA+ VTL+GVPAA PGQPAQLQLNATE+DD RSFFC ATL+
Sbjct: 329 LSEPSVSEGQMVTVTCAAGAQALVTLEGVPAAVPGQPAQLQLNATENDDRRSFFCDATLD 388
Query: 381 VDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGS 440
VDGE L +N S +LRVLY P++D + CP+ W + L+C+ARGNP P + C +
Sbjct: 389 VDGETLIKNRSAELRVLYAPRLDDSDCPRSWTWPEGPEQTLRCEARGNPEPSVHCARSDG 448
Query: 441 SREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
+ +G+ V +GTY+C+A++ +G+ V + +E
Sbjct: 449 GAVLALGLLGPVTRALSGTYRCKAANDQGEAVKDVTLTVE 488
Score = 64.7 bits (156), Expect = 2e-10
Identities = 97/381 (25%), Positives = 145/381 (38%), Gaps = 51/381 (13%)
Query: 117 PERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEV-TA 175
P+ LA P VG + C ++ P + V L ++ LS +E A V TA
Sbjct: 228 PDAPRLAA-PRLLEVGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATA 286
Query: 176 TVLASRDDHGA-PFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVE 234
T AS + GA C L + N + + P L P E +
Sbjct: 287 TATASAEQEGARQLVCNVTLGGE--------NRETRENVTIYSFPAPLLTLSEPSVSEGQ 338
Query: 235 TSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVC 294
V C A+ AQ + L + + A V L AT + + R C
Sbjct: 339 MV-TVTC-------AAGAQALVTL--EGVPAAVPGQPAQLQLNAT-----ENDDRRSFFC 383
Query: 295 NVTLG--GERREARENLTVFSFLGPIVNLSEP----TAHEGSTVTVSCMAGARVQVTL-- 346
+ TL GE + + P ++ S+ T EG T+ C A + ++
Sbjct: 384 DATLDVDGETLIKNRSAELRVLYAPRLDDSDCPRSWTWPEGPEQTLRCEARGNPEPSVHC 443
Query: 347 ---DGVPAAAPGQ--PAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPK 401
DG A G P L+ T + C A + GE + V L V Y P
Sbjct: 444 ARSDGGAVLALGLLGPVTRALSGT-------YRCKAAND-QGEAV---KDVTLTVEYAPA 492
Query: 402 IDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQ 461
+D CP+ + W + T L C A G P P++ C++ G V G+ V H GTY+
Sbjct: 493 LDSVGCPERITWLEGTEASLSCVAHGVPPPDVICVRSGELGAVIEGL-LRVAREHAGTYR 551
Query: 462 CQASSSRGKYTLVVVMDIEAG 482
C+A++ RG V + +E G
Sbjct: 552 CEATNPRGSAAKNVAVTVEYG 572
Score = 59.7 bits (143), Expect = 7e-09
Identities = 110/475 (23%), Positives = 180/475 (37%), Gaps = 83/475 (17%)
Query: 42 VLSAGGSLFVNCSTD--CPSSEK---IAL-ETSLSKELVASGMGWAAFNLSNVT----GN 91
+L G V+C+ D P+SE +AL + +LS ++ G + A + + G
Sbjct: 238 LLEVGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATATATASAEQEGA 297
Query: 92 SRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLT 151
+++C+V G N+T+Y P + L P GQ T+ C + T
Sbjct: 298 RQLVCNVTLGGENRETRENVTIYSFPAPL-LTLSEPSVSEGQMVTVTCAAGAQALVT--- 353
Query: 152 VVLLRWEEELSRQPAVEEPAEVTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPR 211
L PA + A+ +D F C LD+ G L N SA
Sbjct: 354 ---------LEGVPAAVPGQPAQLQLNATENDDRRSFFCDATLDVD--GETLIKNRSA-- 400
Query: 212 QLRTFVLPVTPPRLVAPRFLEVET----SWP------VDCTLDGLFPASEAQVYLALGDQ 261
+LR L APR + + +WP + C G E V+ A D
Sbjct: 401 ELRV---------LYAPRLDDSDCPRSWTWPEGPEQTLRCEARG---NPEPSVHCARSD- 447
Query: 262 MLNATVMNHG--DTLTATATATAR---ADQEGAREIVCNVTLGGERREARENLTVFSFLG 316
V+ G +T + T R A+ +G E V +VTL E A +++ +
Sbjct: 448 --GGAVLALGLLGPVTRALSGTYRCKAANDQG--EAVKDVTLTVEYAPALDSVGCPERI- 502
Query: 317 PIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSFFCS 376
T EG+ ++SC+A + V + G + L G ++ C
Sbjct: 503 --------TWLEGTEASLSCVAHGVPPPDVICVRSGELGAVIEGLLRVAREHAG-TYRCE 553
Query: 377 ATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCL 436
AT +V + V YGP+ + +CP + W + + + C+ G P P ++C+
Sbjct: 554 ATNPRGSAA----KNVAVTVEYGPRFEEPSCPSNWTWVEGSGRLFSCEVDGKPQPSVKCV 609
Query: 437 KEGSSRE---VPVG-------IPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIEA 481
G + E +P+ P V G Y C A++ G VV+ E+
Sbjct: 610 GSGGATEGVLLPLAPPDPSPRAPRIPRVLAPGIYVCNATNRHGSVAKTVVVSAES 664
Score = 54.7 bits (130), Expect = 2e-07
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 37/228 (16%)
Query: 274 LTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAH------ 327
L A R +E A C T R A +N+ V GP EP+
Sbjct: 532 LGAVIEGLLRVAREHAGTYRCEAT--NPRGSAAKNVAVTVEYGP--RFEEPSCPSNWTWV 587
Query: 328 EGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRS----------FFCSA 377
EGS SC + Q ++ V + + L L + + C+A
Sbjct: 588 EGSGRLFSCEVDGKPQPSVKCVGSGGATEGVLLPLAPPDPSPRAPRIPRVLAPGIYVCNA 647
Query: 378 TLEVDGEFLHRNSSVQLRVLYG----PKIDRATCPQHLKWKDKTR-HVLQCQARGNPYPE 432
T +R+ SV V+ P++D +TCP H W + L C ARG P P
Sbjct: 648 T--------NRHGSVAKTVVVSAESPPEMDESTCPSHQTWLEGAEASALACAARGRPSPG 699
Query: 433 LRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
+RC +EG +P V+ GTY C A+++ G + V + +E
Sbjct: 700 VRCSREG----IPWPEQQRVSREDAGTYHCVATNAHGTDSRTVTVGVE 743
>gi|167466198 intercellular adhesion molecule 1 precursor [Homo
sapiens]
Length = 532
Score = 462 bits (1189), Expect = e-130
Identities = 249/532 (46%), Positives = 334/532 (62%), Gaps = 14/532 (2%)
Query: 4 MVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKI 63
M PS P L++ L PG + V P +L GGS+ V CST C + +
Sbjct: 1 MAPSSPRPALPALLVLLGALFPGPGNAQ--TSVSPSKVILPRGGSVLVTCSTSCDQPKLL 58
Query: 64 ALETSL-SKELVASGMGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVEL 122
+ET L KEL+ G + LSNV +S+ +C C Q T + +TVY PERVEL
Sbjct: 59 GIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVEL 118
Query: 123 APLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTATVLASRD 182
APLP WQPVG+N TLRCQVE G+PR +LTVVLLR E+EL R+PAV EPAEVT TVL RD
Sbjct: 119 APLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRD 178
Query: 183 DHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVDCT 242
HGA FSCRTELD++PQGL LF NTSAP QL+TFVLP TPP+LV+PR LEV+T V C+
Sbjct: 179 HHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCS 238
Query: 243 LDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGER 302
LDGLFP SEAQV+LALGDQ LN TV D+ +A A+ + A+ EG + + C V LG +
Sbjct: 239 LDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS 298
Query: 303 REARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQL 362
+E + +T++SF P V L++P EG+ VTV C A R +VTL+GVPA G AQL L
Sbjct: 299 QETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLL 358
Query: 363 NATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQ 422
AT D+GRSF CSATLEV G+ +H+N + +LRVLYGP++D CP + W + ++
Sbjct: 359 KATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPM 418
Query: 423 CQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTLVVVMDIEAG 482
CQA GNP PEL+CLK+G+ +P+G V GTY C+A S++G+ T V +++
Sbjct: 419 CQAWGNPLPELKCLKDGTF-PLPIGESVTVTRDLEGTYLCRARSTQGEVTRKVTVNV--- 474
Query: 483 SSHFVPVFVAVLLTLGVVTIVLAL----MYVFREHQRSGSYHVREESTYLPL 530
P + V++T+ +++ Y++ ++ Y +++ P+
Sbjct: 475 ---LSPRYEIVIITVVAAAVIMGTAGLSTYLYNRQRKIKKYRLQQAQKGTPM 523
>gi|153082722 intercellular adhesion molecule 2 precursor [Homo
sapiens]
Length = 275
Score = 119 bits (299), Expect = 5e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASG 77
L+CC PG + F + V P+ + GSL VNCST C E LETSL K L+
Sbjct: 16 LICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLDKILLDEQ 72
Query: 78 MGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTL 137
W + +SN++ ++ + C C+G Q + +SN++VY+ P +V L P VG++FT+
Sbjct: 73 AQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTI 132
Query: 138 RCQVEDGSPRTSLTVVLLRWEEELSRQ---PAVEEPAEVTATV--LASRDDHGAPFSCRT 192
C+V P SLT+ L R E L + A P E TAT A R+D FSC
Sbjct: 133 ECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLA 192
Query: 193 ELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLV 226
LD+ +G +F SAP+ L + PV+ ++V
Sbjct: 193 VLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMV 225
>gi|153082719 intercellular adhesion molecule 2 precursor [Homo
sapiens]
Length = 275
Score = 119 bits (299), Expect = 5e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASG 77
L+CC PG + F + V P+ + GSL VNCST C E LETSL K L+
Sbjct: 16 LICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLDKILLDEQ 72
Query: 78 MGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTL 137
W + +SN++ ++ + C C+G Q + +SN++VY+ P +V L P VG++FT+
Sbjct: 73 AQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTI 132
Query: 138 RCQVEDGSPRTSLTVVLLRWEEELSRQ---PAVEEPAEVTATV--LASRDDHGAPFSCRT 192
C+V P SLT+ L R E L + A P E TAT A R+D FSC
Sbjct: 133 ECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLA 192
Query: 193 ELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLV 226
LD+ +G +F SAP+ L + PV+ ++V
Sbjct: 193 VLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMV 225
>gi|153082699 intercellular adhesion molecule 2 precursor [Homo
sapiens]
Length = 275
Score = 119 bits (299), Expect = 5e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASG 77
L+CC PG + F + V P+ + GSL VNCST C E LETSL K L+
Sbjct: 16 LICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLDKILLDEQ 72
Query: 78 MGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTL 137
W + +SN++ ++ + C C+G Q + +SN++VY+ P +V L P VG++FT+
Sbjct: 73 AQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTI 132
Query: 138 RCQVEDGSPRTSLTVVLLRWEEELSRQ---PAVEEPAEVTATV--LASRDDHGAPFSCRT 192
C+V P SLT+ L R E L + A P E TAT A R+D FSC
Sbjct: 133 ECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLA 192
Query: 193 ELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLV 226
LD+ +G +F SAP+ L + PV+ ++V
Sbjct: 193 VLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMV 225
>gi|153082686 intercellular adhesion molecule 2 precursor [Homo
sapiens]
Length = 275
Score = 119 bits (299), Expect = 5e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASG 77
L+CC PG + F + V P+ + GSL VNCST C E LETSL K L+
Sbjct: 16 LICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLDKILLDEQ 72
Query: 78 MGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTL 137
W + +SN++ ++ + C C+G Q + +SN++VY+ P +V L P VG++FT+
Sbjct: 73 AQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTI 132
Query: 138 RCQVEDGSPRTSLTVVLLRWEEELSRQ---PAVEEPAEVTATV--LASRDDHGAPFSCRT 192
C+V P SLT+ L R E L + A P E TAT A R+D FSC
Sbjct: 133 ECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLA 192
Query: 193 ELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLV 226
LD+ +G +F SAP+ L + PV+ ++V
Sbjct: 193 VLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMV 225
>gi|153082696 intercellular adhesion molecule 2 precursor [Homo
sapiens]
Length = 275
Score = 119 bits (299), Expect = 5e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASG 77
L+CC PG + F + V P+ + GSL VNCST C E LETSL K L+
Sbjct: 16 LICC---PGSDEKVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLDKILLDEQ 72
Query: 78 MGWAAFNLSNVTGNSRILCSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPVGQNFTL 137
W + +SN++ ++ + C C+G Q + +SN++VY+ P +V L P VG++FT+
Sbjct: 73 AQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTI 132
Query: 138 RCQVEDGSPRTSLTVVLLRWEEELSRQ---PAVEEPAEVTATV--LASRDDHGAPFSCRT 192
C+V P SLT+ L R E L + A P E TAT A R+D FSC
Sbjct: 133 ECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLA 192
Query: 193 ELDMQPQGLGLFVNTSAPRQLRTFVLPVTPPRLV 226
LD+ +G +F SAP+ L + PV+ ++V
Sbjct: 193 VLDLMSRGGNIFHKHSAPKMLEIYE-PVSDSQMV 225
>gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor
[Homo sapiens]
Length = 271
Score = 73.2 bits (178), Expect = 6e-13
Identities = 64/199 (32%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 23 LTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAA 82
L P F +R+ P+ + G S+ +NCS CP + +L T L + G GW +
Sbjct: 39 LAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVS 98
Query: 83 FNLSNVTGNSRIL-CSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPV--GQNFTLRC 139
+ L +V S + C V C G +S IT Y+ P V L P PV G+ +TLRC
Sbjct: 99 YQLLDVRAWSSLAHCLVTCAGKTRWATSRITAYKPPHSVILEP-----PVLKGRKYTLRC 153
Query: 140 QVEDGSPRTSLTVVL-----LRWEEELSRQPAVEEPAEVTAT--VLASRDDHGAPFSCRT 192
V P L V L + + E L R + + A VT T A D P C
Sbjct: 154 HVTQVFPVGYLVVTLRHGSRVIYSESLERFTGL-DLANVTLTYEFAAGPRDFWQPVICHA 212
Query: 193 ELDMQPQGLGLFV-NTSAP 210
L++ GL V N+SAP
Sbjct: 213 RLNLD----GLVVRNSSAP 227
>gi|12545402 intercellular adhesion molecule 4 isoform 2 precursor
[Homo sapiens]
Length = 237
Score = 73.2 bits (178), Expect = 6e-13
Identities = 64/199 (32%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 23 LTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAA 82
L P F +R+ P+ + G S+ +NCS CP + +L T L + G GW +
Sbjct: 39 LAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVS 98
Query: 83 FNLSNVTGNSRIL-CSVYCNGSQITGSSNITVYRLPERVELAPLPPWQPV--GQNFTLRC 139
+ L +V S + C V C G +S IT Y+ P V L P PV G+ +TLRC
Sbjct: 99 YQLLDVRAWSSLAHCLVTCAGKTRWATSRITAYKPPHSVILEP-----PVLKGRKYTLRC 153
Query: 140 QVEDGSPRTSLTVVL-----LRWEEELSRQPAVEEPAEVTAT--VLASRDDHGAPFSCRT 192
V P L V L + + E L R + + A VT T A D P C
Sbjct: 154 HVTQVFPVGYLVVTLRHGSRVIYSESLERFTGL-DLANVTLTYEFAAGPRDFWQPVICHA 212
Query: 193 ELDMQPQGLGLFV-NTSAP 210
L++ GL V N+SAP
Sbjct: 213 RLNLD----GLVVRNSSAP 227
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 62.8 bits (151), Expect = 8e-10
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 303 REARENLTVFSF-LGPIVNLSEPTAHEGSTVTVSCMAGAR---VQVTLDGVPAAAPGQPA 358
R A+ +TV PI+ + + E T T++C + ++T G+P
Sbjct: 118 RTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARLTWRKGDQELHGEPT 177
Query: 359 QLQ---------------LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKID 403
++Q T DDG S CS E + R++S ++ VLY P
Sbjct: 178 RIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHE-SLKGADRSTSQRIEVLYTPTAM 236
Query: 404 RATCPQHLKWKDKTRHVLQCQARGNPYPELRCL-KEGS------SREVPVGIPFFVNVTH 456
P H + K +L C+ RGNP P+ KEGS ++E + PF +N +
Sbjct: 237 IRPDPPHPREGQKL--LLHCEGRGNPVPQQYLWEKEGSVPPLKMTQESALIFPF-LNKSD 293
Query: 457 NGTYQCQASSSRGKYTLVVVMDIE------AGSSHFVPVFVAVLLTLGVVTIVLALMYVF 510
+GTY C A+S+ G Y +++ + SS + + + + + +L +M +F
Sbjct: 294 SGTYGCTATSNMGSYKAYYTLNVNDPSPVPSSSSTYHAIIGGI---VAFIVFLLLIMLIF 350
Query: 511 REHQRSGSYHVREESTYL 528
H Y +R + TYL
Sbjct: 351 LGH-----YLIRHKGTYL 363
>gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 8e-10
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 303 REARENLTVFSF-LGPIVNLSEPTAHEGSTVTVSCMAGAR---VQVTLDGVPAAAPGQPA 358
R A+ +TV PI+ + + E T T++C + ++T G+P
Sbjct: 152 RTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARLTWRKGDQELHGEPT 211
Query: 359 QLQ---------------LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKID 403
++Q T DDG S CS E + R++S ++ VLY P
Sbjct: 212 RIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHE-SLKGADRSTSQRIEVLYTPTAM 270
Query: 404 RATCPQHLKWKDKTRHVLQCQARGNPYPELRCL-KEGS------SREVPVGIPFFVNVTH 456
P H + K +L C+ RGNP P+ KEGS ++E + PF +N +
Sbjct: 271 IRPDPPHPREGQKL--LLHCEGRGNPVPQQYLWEKEGSVPPLKMTQESALIFPF-LNKSD 327
Query: 457 NGTYQCQASSSRGKYTLVVVMDIE------AGSSHFVPVFVAVLLTLGVVTIVLALMYVF 510
+GTY C A+S+ G Y +++ + SS + + + + + +L +M +F
Sbjct: 328 SGTYGCTATSNMGSYKAYYTLNVNDPSPVPSSSSTYHAIIGGI---VAFIVFLLLIMLIF 384
Query: 511 REHQRSGSYHVREESTYL 528
H Y +R + TYL
Sbjct: 385 LGH-----YLIRHKGTYL 397
>gi|85068578 intercellular adhesion molecule 4 isoform 3 precursor
[Homo sapiens]
Length = 272
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 23 LTPGVQGQEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAA 82
L P F +R+ P+ + G S+ +NCS CP + +L T L + G GW +
Sbjct: 39 LAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVS 98
Query: 83 FNLSNVTGNSRIL-CSVYCNGSQITGSSNITVYRLPERVELAPLPPWQP 130
+ L +V S + C V C G +S IT Y +P + W+P
Sbjct: 99 YQLLDVRAWSSLAHCLVTCAGKTRWATSRITAYSVPGGLLGGDPEAWKP 147
>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
Length = 437
Score = 52.0 bits (123), Expect = 1e-06
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVL---YGPKIDRATCPQHLKWKDK 416
L SDDG + C VD E L+ V ++VL Y P + P ++
Sbjct: 190 LDFRVDRSDDGVAVIC----RVDHESLNATPQVAMQVLEIHYTPSVK--IIPSTPFPQEG 243
Query: 417 TRHVLQCQARGNPYPE-LRCLKEG-----------SSREVPVGIPFFVNVTHNGTYQCQA 464
+L C+++G P PE + K+G S RE+ + F+N T NGTY+C+A
Sbjct: 244 QPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNI---LFLNKTDNGTYRCEA 300
Query: 465 SSSRGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLAL 506
+++ G+ + V+ + + +P + LT VT +A+
Sbjct: 301 TNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAI 342
>gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Homo
sapiens]
Length = 414
Score = 48.9 bits (115), Expect = 1e-05
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 45/257 (17%)
Query: 306 RENLTVFSFLGP----IVNLSEPTAHEGSTVTVSCMAGARVQVT----------LDGVPA 351
+E+ T + L P ++++ + TA EG + V+C A A T L G
Sbjct: 132 QESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSE 191
Query: 352 AAPGQP-----AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQ--LRVLYGPKID- 403
+QL L + DDG C +V+ + N Q L V Y P++
Sbjct: 192 VEEWSDMYTVTSQLMLKVHKEDDGVPVIC----QVEHPAVTGNLQTQRYLEVQYKPQVHI 247
Query: 404 RATCPQHLKWKDKTRHVLQCQARGNPYPEL----RCLKEGSSREVPVGIPFFVN---VTH 456
+ T P ++ L C+A G P P + R E V G F+N T
Sbjct: 248 QMTYPLQGLTREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTD 307
Query: 457 NGTYQCQASSSRGKY---TLVVVMDIEAGS-------SHFVPVFVAVLLTLGVVTIVLAL 506
NGTY+C+AS+ GK ++ V D AG H V V ++ ++ +++ L
Sbjct: 308 NGTYRCEASNIVGKAHSDYMLYVYDSRAGEEGSIRAVDHAVIGGVVAVVVFAMLCLLIIL 367
Query: 507 MYVFREHQRSGSYHVRE 523
F H+ G+Y E
Sbjct: 368 GRYFARHK--GTYFTHE 382
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 328 EGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSF-FCSATLEVDGEF- 385
E ++V+++C A + L + G P L + GR T+E G++
Sbjct: 2400 EKNSVSLTCEASG---IPLPSITWFKDGWPVSLSNSVRILSGGRMLRLMQTTMEDAGQYT 2456
Query: 386 -LHRNSSVQLRVLYG------PKIDRATCPQHLKWKDKTRHVLQCQARGNPYPEL----- 433
+ RN++ + R ++G P I + +K K+K L C+ GNP PE+
Sbjct: 2457 CVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQSVTLTCEVTGNPVPEITWHKD 2516
Query: 434 -RCLKEGSSREVPVGIPFF----VNVTHNGTYQCQASSSRG 469
+ L+E + + G F V V H G Y C ASS G
Sbjct: 2517 GQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTCLASSPAG 2557
Score = 39.3 bits (90), Expect = 0.009
Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 38/224 (16%)
Query: 287 EGAREIVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTL 346
E + E VC T + + LTV+ + P V + + V +S +AG V +
Sbjct: 1044 EESGEYVCTATNTAGYAKRKVQLTVY--VRPRVFGDQRGLSQDKPVEISVLAGEEVTLPC 1101
Query: 347 D-------------GVPAAAPGQP-------AQLQLNATESDDGRSFFCSATLEVDGEFL 386
+ +P P +++ T + D + C AT + G
Sbjct: 1102 EVKSLPPPIITWAKETQLISPFSPRHTFLPSGSMKITETRTSDSGMYLCVAT-NIAGNV- 1159
Query: 387 HRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREV-- 444
+V+L V PKI R P+HLK + R + C A+G P P + K GS+ V
Sbjct: 1160 --TQAVKLNVHVPPKIQRG--PKHLKVQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDG 1215
Query: 445 ------PVGIPFFVNVTHN--GTYQCQASSSRGKYTLVVVMDIE 480
P G T + G Y C A++ G + + ++
Sbjct: 1216 EHHVSNPDGTLSIDQATPSDAGIYTCVATNIAGTDETEITLHVQ 1259
Score = 37.7 bits (86), Expect = 0.027
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 305 ARENLTVFSFLGPIV--NLSEPTAHE---GSTVTVSCMAGARVQVTL----DGVPAAAPG 355
A ++ V ++ P++ NL+ P + ++T+ C A L DGVP A
Sbjct: 1627 AEKSFHVDVYVPPMIEGNLATPLNKQVVIAHSLTLECKAAGNPSPILTWLKDGVPVKAND 1686
Query: 356 Q------PAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQ 409
+L++ + + D + C AT V GE + ++ VL P I+
Sbjct: 1687 NIRIEAGGKKLEIMSAQEIDRGQYICVAT-SVAGE---KEIKYEVDVLVPPAIEGGDETS 1742
Query: 410 HLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFFVN----------VTHNGT 459
+ L C G+P P + LK+G + G +N V++ G
Sbjct: 1743 YFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDERDGFKILLNGRKLVIAQAQVSNTGL 1802
Query: 460 YQCQASSSRGKY 471
Y+C A+++ G +
Sbjct: 1803 YRCMAANTAGDH 1814
Score = 37.4 bits (85), Expect = 0.036
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 45/271 (16%)
Query: 304 EARENLTVFSFLGPIVNLSEPTAH--EGSTVTVSC--MAGARV--------QVTLDGVPA 351
++ +TV + P++ +S A+ EG +T+ C +AG + L P
Sbjct: 877 QSETTVTVTGLVAPLIGISPSVANVIEGQQLTLPCTLLAGNPIPERRWIKNSAMLLQNPY 936
Query: 352 AAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHL 411
L + + DG + C A+ V G ++ +SV + VL P I Q L
Sbjct: 937 ITVRSDGSLHIERVQLQDGGEYTCVAS-NVAGTN-NKTTSVVVHVL--PTIQHGQ--QIL 990
Query: 412 KWKDKTRHVLQCQARGNPYPELRCLKEG-----SSREVPVGIPFFVNVT-----HNGTYQ 461
+ L C+A GNP P + K+G SS + G + V +G Y
Sbjct: 991 STIEGIPVTLPCKASGNPKPSVIWSKKGELISTSSAKFSAGADGSLYVVSPGGEESGEYV 1050
Query: 462 CQASSSRG----KYTLVV-----VMDIEAGSSHFVPVFVAVL------LTLGVVTIVLAL 506
C A+++ G K L V V + G S PV ++VL L V ++ +
Sbjct: 1051 CTATNTAGYAKRKVQLTVYVRPRVFGDQRGLSQDKPVEISVLAGEEVTLPCEVKSLPPPI 1110
Query: 507 MYVFREHQRSGSYHVREESTYLPLTSMQPTE 537
+ +E Q + R T+LP SM+ TE
Sbjct: 1111 ITWAKETQLISPFSPRH--TFLPSGSMKITE 1139
Score = 36.2 bits (82), Expect = 0.079
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 29/175 (16%)
Query: 320 NLSEPTAHEGSTVTVSCMAGARVQVTL----DGVPAAA-------PGQPAQLQLNATESD 368
N + T S ++ C A + T+ DG P + PG LNA E +
Sbjct: 2581 NPEDVTVILNSPTSLVCEAYSYPPATITWFKDGTPLESNRNIRILPGGRTLQILNAQEDN 2640
Query: 369 DGRSFFCSATLEVDGEFLHRNSSVQLRV------LYGPKIDRATCPQHLKWKDKTRHVLQ 422
GR + C AT E H V + L+GP + P+ +K K L+
Sbjct: 2641 AGR-YSCVATNEAGEMIKHYEVKVYIPPIINKGDLWGPGLS----PKEVKIKVNNTLTLE 2695
Query: 423 CQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHNG-TYQCQAS--SSRGKYTLV 474
C+A P L K+G P+ VN+ NG T Q + + S G+YT V
Sbjct: 2696 CEAYAIPSASLSWYKDGQ----PLKSDDHVNIAANGHTLQIKEAQISDTGRYTCV 2746
Score = 33.1 bits (74), Expect = 0.67
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 20/120 (16%)
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
AT D GR + C A + + G + VL P I P + L+C
Sbjct: 1421 ATPEDAGR-YSCKA-INIAGT---SQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALEC 1475
Query: 424 QARGNPYPELRCLKEGSSREVPVGIP-----------FFVNVTHN--GTYQCQASSSRGK 470
Q +G P+P++ K+G + + +G P N N G YQC S++ GK
Sbjct: 1476 QVKGTPFPDIHWFKDG--KPLFLGDPNVELLDRGQVLHLKNARRNDKGRYQCTVSNAAGK 1533
Score = 32.3 bits (72), Expect = 1.1
Identities = 44/197 (22%), Positives = 71/197 (36%), Gaps = 30/197 (15%)
Query: 321 LSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQ-----------LQLNATESDD 369
LSE + V + C+A ++ + P AQ LQ+ T +D
Sbjct: 1833 LSERVVVKYKPVALQCIANGIPNPSITWLKDDQPVNTAQGNLKIQSSGRVLQIAKTLLED 1892
Query: 370 GRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNP 429
+ C AT GE +QL V P ++ A + L+C+A GNP
Sbjct: 1893 AGRYTCVAT-NAAGE---TQQHIQLHVHEPPSLEDAGKMLNETVLVSNPVQLECKAAGNP 1948
Query: 430 YPELRCLKEGSSREVPVGIPFF----------VNVTHNGTYQCQASSSRGKYTLVVVMDI 479
P + K+ + F ++ G Y+C A +S G L + +
Sbjct: 1949 VPVITWYKDNRLLSGSTSMTFLNRGQIIDIESAQISDAGIYKCVAINSAGATELFYSLQV 2008
Query: 480 E-----AGSSHFVPVFV 491
+GS++ V V V
Sbjct: 2009 HVAPSISGSNNMVAVVV 2025
Score = 31.2 bits (69), Expect = 2.6
Identities = 49/194 (25%), Positives = 73/194 (37%), Gaps = 46/194 (23%)
Query: 308 NLTVFS--FLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAA-----PGQPAQL 360
NL VF+ + + E T +GS+ +++C+ DG PA + GQP L
Sbjct: 3427 NLQVFAPPNMDNSMGTEEITVLKGSSTSMACIT--------DGTPAPSMAWLRDGQPLGL 3478
Query: 361 -------------QLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATC 407
QL E++D + C A+ E H L+VL P I+ +
Sbjct: 3479 DAHLTVSTHGMVLQLLKAETEDSGKYTCIASNEAGEVSKH----FILKVLEPPHINGSEE 3534
Query: 408 PQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVP------------VGIPFFVNVT 455
+ + L C A G P P++ +K+G R +P V V
Sbjct: 3535 HEEISVIVNNPLELTCIASGIPAPKMTWMKDG--RPLPQTDQVQTLGGGEVLRISTAQVE 3592
Query: 456 HNGTYQCQASSSRG 469
G Y C ASS G
Sbjct: 3593 DTGRYTCLASSPAG 3606
Score = 29.6 bits (65), Expect = 7.4
Identities = 62/320 (19%), Positives = 113/320 (35%), Gaps = 36/320 (11%)
Query: 205 VNTSAPRQLRTFVLPVTPPRLVAP-RFLEVETSWPVD--CTLDGLFPASEAQVYLALGDQ 261
VN + +Q + PP ++ + + V S V+ C D + P + +L G
Sbjct: 2086 VNAAGEKQRDIDLRVYVPPNIMGEEQNVSVLISQAVELLCQSDAIPPPT--LTWLKDGHP 2143
Query: 262 MLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNL 321
+L ++ + + A+ G G + N+ V +G L
Sbjct: 2144 LLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAGKTEKNYNVNIWVPPNIGGSDEL 2203
Query: 322 SEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAP------------GQPAQLQLNATESDD 369
++ T EG+ +++ C + L +P QLQ++ E D
Sbjct: 2204 TQLTVIEGNLISLLCESSGIPPPNLIWKKKGSPVLTDSMGRVRILSGGRQLQISIAEKSD 2263
Query: 370 GRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRA-TCPQHLKWKDKTRHVLQCQARGN 428
+ C A+ V G L+V P I + + P + L+C+ +G
Sbjct: 2264 AALYSCVAS-NVAGT---AKKEYNLQVYIRPTITNSGSHPTEIIVTRGKSISLECEVQGI 2319
Query: 429 PYPELRCLKEGSSREVPVGIPFF----------VNVTHNGTYQCQASSSRG----KYTLV 474
P P + +K+G G+ ++V+ G Y C A + G KY L
Sbjct: 2320 PPPTVTWMKDGHPLIKAKGVEILDEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLS 2379
Query: 475 VVMDIEAGSSHFVPVFVAVL 494
V +H P ++V+
Sbjct: 2380 VHAPPSIIGNHRSPENISVV 2399
Score = 29.3 bits (64), Expect = 9.7
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 333 TVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
TV+ M + GV G QL+ N SD GR + C A + V G +
Sbjct: 2323 TVTWMKDGHPLIKAKGVEILDEGHILQLK-NIHVSDTGR-YVCVA-VNVAGM---TDKKY 2376
Query: 393 QLRVLYGPKI-DRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFF 451
L V P I P+++ +K L C+A G P P + K+G PV +
Sbjct: 2377 DLSVHAPPSIIGNHRSPENISVVEKNSVSLTCEASGIPLPSITWFKDG----WPVSLSNS 2432
Query: 452 VNVTHNG---TYQCQASSSRGKYTLVV 475
V + G G+YT VV
Sbjct: 2433 VRILSGGRMLRLMQTTMEDAGQYTCVV 2459
>gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Homo
sapiens]
Length = 442
Score = 44.3 bits (103), Expect = 3e-04
Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 33/194 (17%)
Query: 306 RENLTVFSFLGP----IVNLSEPTAHEGSTVTVSCMAGARVQVT----------LDGVPA 351
+E+ T + L P ++++ + TA EG + V+C A A T L G
Sbjct: 132 QESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSE 191
Query: 352 AAPGQP-----AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQ--LRVLYGPKID- 403
+QL L + DDG C +V+ + N Q L V Y P++
Sbjct: 192 VEEWSDMYTVTSQLMLKVHKEDDGVPVIC----QVEHPAVTGNLQTQRYLEVQYKPQVHI 247
Query: 404 RATCPQHLKWKDKTRHVLQCQARGNPYPEL----RCLKEGSSREVPVGIPFFVN---VTH 456
+ T P ++ L C+A G P P + R E V G F+N T
Sbjct: 248 QMTYPLQGLTREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFINNLNKTD 307
Query: 457 NGTYQCQASSSRGK 470
NGTY+C+AS+ GK
Sbjct: 308 NGTYRCEASNIVGK 321
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 43.5 bits (101), Expect = 5e-04
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRH 419
L L + + +D S+ C +R+ V L VLYGP P ++
Sbjct: 200 LTLLSVKRNDAGSYECEIQNPASA---NRSDPVTLNVLYGPD-GPTISPSKANYRPGENL 255
Query: 420 VLQCQARGNPYPELRCLKEGSSREVPVGIPFFVNVTHN--GTYQCQA-SSSRGKYTLVVV 476
L C A NP + G+ ++ + F N+T N G+Y CQA +S+ G V
Sbjct: 256 NLSCHAASNPPAQYSWFINGTFQQSTQEL-FIPNITVNNSGSYMCQAHNSATGLNRTTVT 314
Query: 477 MDIEAGSSHFVPVFVAVLLTLGVVTIV 503
M +GS+ + V +T+GV+ V
Sbjct: 315 MITVSGSAPVLSAVATVGITIGVLARV 341
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 42.7 bits (99), Expect = 8e-04
Identities = 73/299 (24%), Positives = 109/299 (36%), Gaps = 47/299 (15%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD------CTLDGLFPASEA------Q 253
N+S QL V PP++ PR + S D C G P +
Sbjct: 1052 NSSQDLQLEVHV----PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQP 1107
Query: 254 VYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFS 313
V LG Q+ N H + A T E N+ ER+ L
Sbjct: 1108 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAE-------NLAGRAERKFELSVLVPPE 1160
Query: 314 FLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQ----------LQLN 363
+G + L+ TA S +T+ C A + P P + L++
Sbjct: 1161 LIGDLDPLTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMT 1220
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
T+ D + C A+ E GE RN SV+ VL P I+ + +K D L C
Sbjct: 1221 QTQEQDSGLYSCLASNEA-GE-ARRNFSVE--VLVPPSIENEDLEEVIKVLDGQTAHLMC 1276
Query: 424 QARGNPYPELRCLKEG-------SSREVPVGIPFFV---NVTHNGTYQCQASSSRGKYT 472
G+P P+L K+G + P G+ V N++ G Y C A+++ G+ T
Sbjct: 1277 NVTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANAVGEKT 1335
Score = 40.8 bits (94), Expect = 0.003
Identities = 57/221 (25%), Positives = 77/221 (34%), Gaps = 24/221 (10%)
Query: 263 LNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNLS 322
L+ + HG T + AD G V G R + V L P+ +
Sbjct: 2165 LSQRTLLHGSGHTLRISKVQLADA-GIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQN 2223
Query: 323 EPTAHEGSTVTVSCMAGA----RVQVTLDGVPAAAPG--QPAQLQLNATESDDGRSFFCS 376
+ GS V + C A V DG P + Q LQL A + D ++ C
Sbjct: 2224 DVVVVRGSLVELPCEARGVPLPLVSWMKDGEPLLSQSLEQGPSLQLEAVGAGDSGTYSCV 2283
Query: 377 ATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCL 436
A E H QL V+ P I+ + P L L C A+G P P +
Sbjct: 2284 AVSEAGEARRH----FQLTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITWH 2339
Query: 437 KEG--------SSREVPVGIPFFVNVTHNGTYQCQASSSRG 469
K+G +SR V + V G Y C A S G
Sbjct: 2340 KDGQALTRLENNSRATRV-----LRVRDAGLYTCLAESPAG 2375
Score = 38.9 bits (89), Expect = 0.012
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 41/294 (13%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLE--VETSWPVDCTLDGLFPASEAQVYLALGDQML 263
N + +LR + PPR+ P L V + PV T + S ++L G+ +
Sbjct: 769 NVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCNATGAPSPTLMWLKDGNPVS 828
Query: 264 NA-----TVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVF-SFLGP 317
A V G LT A+ARA G V +G +R++ + + S LG
Sbjct: 829 PAGTPGLQVFPGGRVLTL---ASARASDSGRYSCVAVSAVGEDRQDVVLQVHMPPSILGE 885
Query: 318 IVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQP----------AQLQLNATES 367
+N+S A+E +V + C + A L P +P A LQ++ +
Sbjct: 886 ELNVSV-VANE--SVALECQSHAMPPPVLSWWKDGRPLEPRPGVHLSADKALLQVDRADV 942
Query: 368 DDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARG 427
D + C A + H N +V + ++ P + T L ++ L C+ RG
Sbjct: 943 WDAGHYTCEALNQAGRSEKHYNLNVWVAPVF-PLRESHT----LTVREGHPTSLSCECRG 997
Query: 428 NPYPELRCLKEGS---------SREVPVGIPFFV---NVTHNGTYQCQASSSRG 469
P+P++ K+G VG ++ + GTY C+ S+ G
Sbjct: 998 VPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQLAQEGTYTCECSNVVG 1051
Score = 37.0 bits (84), Expect = 0.047
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 20/140 (14%)
Query: 347 DGVPAAAPGQPAQLQ-----LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPK 401
DG+P QLQ ++ TE DD + C A E+ V + VL
Sbjct: 3064 DGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQCLAENEMGVA-----KKVVILVLQSAP 3118
Query: 402 IDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSS-------REVPVGIPFFVNV 454
+ + PQ + + L+CQA G P P + L+ G R +P G + NV
Sbjct: 3119 VFQVE-PQDMTVRSGDDVALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENV 3177
Query: 455 THN--GTYQCQASSSRGKYT 472
GTY C A + G T
Sbjct: 3178 ETGDAGTYDCVAHNLLGSAT 3197
Score = 36.2 bits (82), Expect = 0.079
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 359 QLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTR 418
QLQL +S D + C A+ V + +L V P I+ A ++ R
Sbjct: 366 QLQLGRAQSSDAGVYTCKASNAVGAA----EKATRLDVYVPPTIEGAGGRPYVVKAVAGR 421
Query: 419 HV-LQCQARGNPYPELRCLKEG----SSREVPVGIPFFV------NVTHNGTYQCQASSS 467
V L+C ARG+P P L EG S E + V +G Y C ASS
Sbjct: 422 PVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGLYSCVASSP 481
Query: 468 RGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVL 504
G+ L ++++ VP + V LG VT ++
Sbjct: 482 AGEAVLQYSVEVQ------VPPQLLVAEGLGQVTTIV 512
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 421 LQCQARGNPYPELRCLKEGSSREVPVGIPF----------FVNVTHNGTYQCQASSSRG 469
L CQA G+P P ++ L+ G E G+ V + H+G + CQA++ G
Sbjct: 518 LPCQASGSPVPTIQWLQNGRPAEELAGVQVASQGTTLHIDHVELDHSGLFACQATNEAG 576
Score = 34.7 bits (78), Expect = 0.23
Identities = 75/347 (21%), Positives = 120/347 (34%), Gaps = 71/347 (20%)
Query: 117 PERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTAT 176
P + L P P + L C + G+P+ ++T W ++ +E + T
Sbjct: 2311 PTELSLTPGAPME-------LLCDAQ-GTPQPNIT-----WHKDGQALTRLENNSRATR- 2356
Query: 177 VLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQL-----RTFVLPVTPPRLVAPRFL 231
VL RD ++C E V AP + FV+ + P +LV +
Sbjct: 2357 VLRVRD--AGLYTCLAESPAGAIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQLVLECSV 2414
Query: 232 EVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGARE 291
E E + + DG+ +A + L ++ D+ + TA A G+
Sbjct: 2415 EAEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARNAA---GSTS 2471
Query: 292 IVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGS-TVTVSCMAGARVQVTLDGVP 350
+ V + + PT G V VS A + DGVP
Sbjct: 2472 VAFRVEIH----------------------TVPTIRSGPPAVNVSVNQTALLPCQADGVP 2509
Query: 351 AAA-----------PGQP-------AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
A P P L++ + D + C A+ + R+
Sbjct: 2510 APLVSWRKDRVPLDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQGRD--- 2566
Query: 393 QLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEG 439
LRVL P I A P +L T +L C+A G+P P + K+G
Sbjct: 2567 -LRVLEPPAI--APSPSNLTLTAHTPALLPCEASGSPKPLVVWWKDG 2610
Score = 33.9 bits (76), Expect = 0.39
Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 261 QMLNATVMNHGDTLTATATATARADQEGAREIVCNVT-LGGERREARENLTVFSFLGPIV 319
Q+L A + + G A A + ++ T LGG A E +TV + PI
Sbjct: 1311 QVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV-TVNNPIS 1369
Query: 320 NLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAA-------PGQPAQLQLNATESDDGRS 372
+ E A +T DG P A PG LNA + D G+
Sbjct: 1370 LICEALAFPSPNITWM----------KDGAPFEASRNIQLLPGTHGLQILNAQKEDAGQ- 1418
Query: 373 FFCSATLEVDGEFLHRNSSVQLRVLYGPKIDR-----ATCPQHLKWKDKTRHVLQCQARG 427
+ C T E+ GE + + + VL P I + + +K K + L+C++
Sbjct: 1419 YTCVVTNEL-GEAV---KNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTLECESWA 1474
Query: 428 NPYPELRCLKEG-----SSREVPVGIPFFV-----NVTHNGTYQCQASSSRGK 470
P P +R K+G SSR +G + V+ +G Y C A++ G+
Sbjct: 1475 VPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGE 1527
Score = 33.5 bits (75), Expect = 0.51
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 346 LDGVPAAAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRA 405
L G P A + L L + D + C AT EV + +L V P I
Sbjct: 45 LHGQPGVAVLEEGSLFLASVSPADSGDYECQATNEVGST----SRRAKLVVYVPPSIRED 100
Query: 406 TCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVG 447
++ L+C A G P PE+ LK+ VP+G
Sbjct: 101 GRKANVSGMAGQSLTLECDANGFPVPEIVWLKDAQLVGVPLG 142
Score = 33.5 bits (75), Expect = 0.51
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKI--DRATCPQHLKWKDKT 417
LQ+ +++ + C A+ EV ++LH +L VL P I D + + +
Sbjct: 1615 LQIPLVRAENAGRYSCKASNEVGEDWLH----YELLVLTPPVILGDTEELVEEVTVNASS 1670
Query: 418 RHVLQCQARGNPYPELRCLKEG 439
LQC A GNP P + L+ G
Sbjct: 1671 TVSLQCPALGNPVPTISWLQNG 1692
Score = 33.1 bits (74), Expect = 0.67
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 324 PTAHEGSTVTVSCMAGARVQVTLD--GVPA------------------AAPGQPAQLQLN 363
PT T TVS +AG+ + +T D GVPA + +LQL+
Sbjct: 1933 PTFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVSRGGRLQLS 1992
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
+ ++ C A + + VL P+I + + + L C
Sbjct: 1993 RLQPAQAGTYTCVA----ENTQAEARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDC 2048
Query: 424 QARGNPYPELRCLKEGSSREVPVG--IPFFVN----------VTHNGTYQCQASSSRGK 470
+A G P P++ LK+GS +G + F+++ + G Y C A + G+
Sbjct: 2049 EADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASDAGAYTCVAHNPAGE 2107
Score = 29.3 bits (64), Expect = 9.7
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 28/219 (12%)
Query: 282 ARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVN--LSEPTAHEGSTVTVSCMAG 339
A A E A +C + L V + P++ L + + EGS + C A
Sbjct: 2814 AHASPEDAGNYLCIAKNSAGSAMGKTRLVVQ--VPPVIENGLPDLSTTEGSHAFLPCKAR 2871
Query: 340 ARVQVTL----DGVPAA-APG----QPA-QLQLNATESDDGRSFFCSATLEVDGEFLHRN 389
+ + DG P + A G QP+ +L + E D ++ C+A V
Sbjct: 2872 GSPEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVG----RAR 2927
Query: 390 SSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPEL------RCLKEGSSRE 443
V L +L P + L+ D R L+C ARG+P P + R + EG S +
Sbjct: 2928 RRVHLTILVLPVFTTLPGDRSLRLGD--RLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQ 2985
Query: 444 VPVGI--PFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
V+ +GTY C A + G+ V + ++
Sbjct: 2986 DGGSTLQRAAVSREDSGTYVCWAENRVGRTQAVSFVHVK 3024
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 42.7 bits (99), Expect = 8e-04
Identities = 73/299 (24%), Positives = 109/299 (36%), Gaps = 47/299 (15%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD------CTLDGLFPASEA------Q 253
N+S QL V PP++ PR + S D C G P +
Sbjct: 2243 NSSQDLQLEVHV----PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQP 2298
Query: 254 VYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFS 313
V LG Q+ N H + A T E N+ ER+ L
Sbjct: 2299 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAE-------NLAGRAERKFELSVLVPPE 2351
Query: 314 FLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQ----------LQLN 363
+G + L+ TA S +T+ C A + P P + L++
Sbjct: 2352 LIGDLDPLTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMT 2411
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
T+ D + C A+ E GE RN SV+ VL P I+ + +K D L C
Sbjct: 2412 QTQEQDSGLYSCLASNEA-GE-ARRNFSVE--VLVPPSIENEDLEEVIKVLDGQTAHLMC 2467
Query: 424 QARGNPYPELRCLKEG-------SSREVPVGIPFFV---NVTHNGTYQCQASSSRGKYT 472
G+P P+L K+G + P G+ V N++ G Y C A+++ G+ T
Sbjct: 2468 NVTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANAVGEKT 2526
Score = 40.8 bits (94), Expect = 0.003
Identities = 57/221 (25%), Positives = 77/221 (34%), Gaps = 24/221 (10%)
Query: 263 LNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNLS 322
L+ + HG T + AD G V G R + V L P+ +
Sbjct: 3356 LSQRTLLHGSGHTLRISKVQLADA-GIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQN 3414
Query: 323 EPTAHEGSTVTVSCMAGA----RVQVTLDGVPAAAPG--QPAQLQLNATESDDGRSFFCS 376
+ GS V + C A V DG P + Q LQL A + D ++ C
Sbjct: 3415 DVVVVRGSLVELPCEARGVPLPLVSWMKDGEPLLSQSLEQGPSLQLEAVGAGDSGTYSCV 3474
Query: 377 ATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCL 436
A E H QL V+ P I+ + P L L C A+G P P +
Sbjct: 3475 AVSEAGEARRH----FQLTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITWH 3530
Query: 437 KEG--------SSREVPVGIPFFVNVTHNGTYQCQASSSRG 469
K+G +SR V + V G Y C A S G
Sbjct: 3531 KDGQALTRLENNSRATRV-----LRVRDAGLYTCLAESPAG 3566
Score = 38.9 bits (89), Expect = 0.012
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 41/294 (13%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLE--VETSWPVDCTLDGLFPASEAQVYLALGDQML 263
N + +LR + PPR+ P L V + PV T + S ++L G+ +
Sbjct: 1960 NVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCNATGAPSPTLMWLKDGNPVS 2019
Query: 264 NA-----TVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVF-SFLGP 317
A V G LT A+ARA G V +G +R++ + + S LG
Sbjct: 2020 PAGTPGLQVFPGGRVLTL---ASARASDSGRYSCVAVSAVGEDRQDVVLQVHMPPSILGE 2076
Query: 318 IVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQP----------AQLQLNATES 367
+N+S A+E +V + C + A L P +P A LQ++ +
Sbjct: 2077 ELNVSV-VANE--SVALECQSHAMPPPVLSWWKDGRPLEPRPGVHLSADKALLQVDRADV 2133
Query: 368 DDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARG 427
D + C A + H N +V + ++ P + T L ++ L C+ RG
Sbjct: 2134 WDAGHYTCEALNQAGHSEKHYNLNVWVAPVF-PLRESHT----LTVREGHPTSLSCECRG 2188
Query: 428 NPYPELRCLKEGS---------SREVPVGIPFFV---NVTHNGTYQCQASSSRG 469
P+P++ K+G VG ++ + GTY C+ S+ G
Sbjct: 2189 VPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQLAQEGTYTCECSNVVG 2242
Score = 37.0 bits (84), Expect = 0.047
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 20/140 (14%)
Query: 347 DGVPAAAPGQPAQLQ-----LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPK 401
DG+P QLQ ++ TE DD + C A E+ V + VL
Sbjct: 4255 DGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQCLAENEMGVA-----KKVVILVLQSAP 4309
Query: 402 IDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSS-------REVPVGIPFFVNV 454
+ + PQ + + L+CQA G P P + L+ G R +P G + NV
Sbjct: 4310 VFQVE-PQDMTVRSGDDVALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENV 4368
Query: 455 THN--GTYQCQASSSRGKYT 472
GTY C A + G T
Sbjct: 4369 ETGDAGTYDCVAHNLLGSAT 4388
Score = 36.2 bits (82), Expect = 0.079
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 359 QLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTR 418
QLQL +S D + C A+ V + +L V P I+ A ++ R
Sbjct: 1557 QLQLGRAQSSDAGVYTCKASNAVGAA----EKATRLDVYVPPTIEGAGGRPYVVKAVAGR 1612
Query: 419 HV-LQCQARGNPYPELRCLKEG----SSREVPVGIPFFV------NVTHNGTYQCQASSS 467
V L+C ARG+P P L EG S E + V +G Y C ASS
Sbjct: 1613 PVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGLYSCVASSP 1672
Query: 468 RGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVL 504
G+ L ++++ VP + V LG VT ++
Sbjct: 1673 AGEAVLQYSVEVQ------VPPQLLVAEGLGQVTTIV 1703
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 421 LQCQARGNPYPELRCLKEGSSREVPVGIPF----------FVNVTHNGTYQCQASSSRG 469
L CQA G+P P ++ L+ G E G+ V + H+G + CQA++ G
Sbjct: 1709 LPCQASGSPVPTIQWLQNGRPAEELAGVQVASQGTTLHIDHVELDHSGLFACQATNEAG 1767
Score = 34.7 bits (78), Expect = 0.23
Identities = 75/347 (21%), Positives = 120/347 (34%), Gaps = 71/347 (20%)
Query: 117 PERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTAT 176
P + L P P + L C + G+P+ ++T W ++ +E + T
Sbjct: 3502 PTELSLTPGAPME-------LLCDAQ-GTPQPNIT-----WHKDGQALTRLENNSRATR- 3547
Query: 177 VLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQL-----RTFVLPVTPPRLVAPRFL 231
VL RD ++C E V AP + FV+ + P +LV +
Sbjct: 3548 VLRVRD--AGLYTCLAESPAGAIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQLVLECSV 3605
Query: 232 EVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGARE 291
E E + + DG+ +A + L ++ D+ + TA A G+
Sbjct: 3606 EAEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARNAA---GSTS 3662
Query: 292 IVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGS-TVTVSCMAGARVQVTLDGVP 350
+ V + + PT G V VS A + DGVP
Sbjct: 3663 VAFRVEIH----------------------TVPTIRSGPPAVNVSVNQTALLPCQADGVP 3700
Query: 351 AAA-----------PGQP-------AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
A P P L++ + D + C A+ + R+
Sbjct: 3701 APLVSWRKDRVPLDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQGRD--- 3757
Query: 393 QLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEG 439
LRVL P I A P +L T +L C+A G+P P + K+G
Sbjct: 3758 -LRVLEPPAI--APSPSNLTLTAHTPALLPCEASGSPKPLVVWWKDG 3801
Score = 34.3 bits (77), Expect = 0.30
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHR---NSSVQLRVLYGPKIDRATCPQHLKWKDK 416
L+L + D + C+A+ G HR V +V GP++ + + L
Sbjct: 1084 LRLAQVQVGDSGHYECTASNPA-GSASHRYVLGVQVPPQVQPGPRVLKVLVGEALD---- 1138
Query: 417 TRHVLQCQARGNPYPELRCLKEG--SSREVPVGIPFF--VNVTHNGTYQCQASSSRG 469
L C A GNP P+L K+G P G F + + G Y+C+AS+S G
Sbjct: 1139 ----LNCVAEGNPEPQLSWSKDGVVLQGRGPQGSVHFAAIRTSDAGRYRCEASNSAG 1191
Score = 34.3 bits (77), Expect = 0.30
Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 13/136 (9%)
Query: 321 LSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAP--GQPA-------QLQLNATESDDGR 371
L E A E +++ + QVT P++ P GQP L L + D
Sbjct: 1215 LLERVAGENASLPCPARGTPKPQVTWRKGPSSEPLHGQPGVAVLEEGSLFLASVSPADSG 1274
Query: 372 SFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYP 431
+ C AT EV + +L V P I ++ L+C A G P P
Sbjct: 1275 DYECQATNEVGST----SRRAKLVVYVPPSIREDGRKANVSGMAGQSLTLECDANGFPVP 1330
Query: 432 ELRCLKEGSSREVPVG 447
E+ LK+ VP+G
Sbjct: 1331 EIVWLKDAQLVGVPLG 1346
Score = 33.9 bits (76), Expect = 0.39
Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 261 QMLNATVMNHGDTLTATATATARADQEGAREIVCNVT-LGGERREARENLTVFSFLGPIV 319
Q+L A + + G A A + ++ T LGG A E +TV + PI
Sbjct: 2502 QVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV-TVNNPIS 2560
Query: 320 NLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAA-------PGQPAQLQLNATESDDGRS 372
+ E A +T DG P A PG LNA + D G+
Sbjct: 2561 LICEALAFPSPNITWM----------KDGAPFEASRNIQLLPGTHGLQILNAQKEDAGQ- 2609
Query: 373 FFCSATLEVDGEFLHRNSSVQLRVLYGPKIDR-----ATCPQHLKWKDKTRHVLQCQARG 427
+ C T E+ GE + + + VL P I + + +K K + L+C++
Sbjct: 2610 YTCVVTNEL-GEAV---KNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTLECESWA 2665
Query: 428 NPYPELRCLKEG-----SSREVPVGIPFFV-----NVTHNGTYQCQASSSRGK 470
P P +R K+G SSR +G + V+ +G Y C A++ G+
Sbjct: 2666 VPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGE 2718
Score = 33.5 bits (75), Expect = 0.51
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKI--DRATCPQHLKWKDKT 417
LQ+ +++ + C A+ EV ++LH +L VL P I D + + +
Sbjct: 2806 LQIPLVRAENAGRYSCKASNEVGEDWLH----YELLVLTPPVILGDTEELVEEVTVNASS 2861
Query: 418 RHVLQCQARGNPYPELRCLKEG 439
LQC A GNP P + L+ G
Sbjct: 2862 TVSLQCPALGNPVPTISWLQNG 2883
Score = 33.1 bits (74), Expect = 0.67
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 324 PTAHEGSTVTVSCMAGARVQVTLD--GVPA------------------AAPGQPAQLQLN 363
PT T TVS +AG+ + +T D GVPA + +LQL+
Sbjct: 3124 PTFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVSRGGRLQLS 3183
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
+ ++ C A + + VL P+I + + + L C
Sbjct: 3184 RLQPAQAGTYTCVA----ENTQAEARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDC 3239
Query: 424 QARGNPYPELRCLKEGSSREVPVG--IPFFVN----------VTHNGTYQCQASSSRGK 470
+A G P P++ LK+GS +G + F+++ + G Y C A + G+
Sbjct: 3240 EADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASDAGAYTCVAHNPAGE 3298
Score = 29.3 bits (64), Expect = 9.7
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 28/219 (12%)
Query: 282 ARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVN--LSEPTAHEGSTVTVSCMAG 339
A A E A +C + L V + P++ L + + EGS + C A
Sbjct: 4005 AHASPEDAGNYLCIAKNSAGSAMGKTRLVVQ--VPPVIENGLPDLSTTEGSHAFLPCKAR 4062
Query: 340 ARVQVTL----DGVPAA-APG----QPA-QLQLNATESDDGRSFFCSATLEVDGEFLHRN 389
+ + DG P + A G QP+ +L + E D ++ C+A V
Sbjct: 4063 GSPEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVG----RAR 4118
Query: 390 SSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPEL------RCLKEGSSRE 443
V L +L P + L+ D R L+C ARG+P P + R + EG S +
Sbjct: 4119 RRVHLTILVLPVFTTLPGDRSLRLGD--RLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQ 4176
Query: 444 VPVGI--PFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
V+ +GTY C A + G+ V + ++
Sbjct: 4177 DGGSTLQRAAVSREDSGTYVCWAENRVGRTQAVSFVHVK 4215
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 42.7 bits (99), Expect = 8e-04
Identities = 73/299 (24%), Positives = 109/299 (36%), Gaps = 47/299 (15%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVD------CTLDGLFPASEA------Q 253
N+S QL V PP++ PR + S D C G P +
Sbjct: 961 NSSQDLQLEVHV----PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQP 1016
Query: 254 VYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFS 313
V LG Q+ N H + A T E N+ ER+ L
Sbjct: 1017 VGAELGLQLQNQGQSLHVERAQAAHTGRYSCVAE-------NLAGRAERKFELSVLVPPE 1069
Query: 314 FLGPIVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQ----------LQLN 363
+G + L+ TA S +T+ C A + P P + L++
Sbjct: 1070 LIGDLDPLTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMT 1129
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
T+ D + C A+ E GE RN SV+ VL P I+ + +K D L C
Sbjct: 1130 QTQEQDSGLYSCLASNEA-GE-ARRNFSVE--VLVPPSIENEDLEEVIKVLDGQTAHLMC 1185
Query: 424 QARGNPYPELRCLKEG-------SSREVPVGIPFFV---NVTHNGTYQCQASSSRGKYT 472
G+P P+L K+G + P G+ V N++ G Y C A+++ G+ T
Sbjct: 1186 NVTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANAVGEKT 1244
Score = 40.8 bits (94), Expect = 0.003
Identities = 57/221 (25%), Positives = 77/221 (34%), Gaps = 24/221 (10%)
Query: 263 LNATVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNLS 322
L+ + HG T + AD G V G R + V L P+ +
Sbjct: 2074 LSQRTLLHGSGHTLRISKVQLADA-GIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQN 2132
Query: 323 EPTAHEGSTVTVSCMAGA----RVQVTLDGVPAAAPG--QPAQLQLNATESDDGRSFFCS 376
+ GS V + C A V DG P + Q LQL A + D ++ C
Sbjct: 2133 DVVVVRGSLVELPCEARGVPLPLVSWMKDGEPLLSQSLEQGPSLQLEAVGAGDSGTYSCV 2192
Query: 377 ATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCL 436
A E H QL V+ P I+ + P L L C A+G P P +
Sbjct: 2193 AVSEAGEARRH----FQLTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITWH 2248
Query: 437 KEG--------SSREVPVGIPFFVNVTHNGTYQCQASSSRG 469
K+G +SR V + V G Y C A S G
Sbjct: 2249 KDGQALTRLENNSRATRV-----LRVRDAGLYTCLAESPAG 2284
Score = 38.5 bits (88), Expect = 0.016
Identities = 70/294 (23%), Positives = 116/294 (39%), Gaps = 41/294 (13%)
Query: 206 NTSAPRQLRTFVLPVTPPRLVAPRFLE--VETSWPVDCTLDGLFPASEAQVYLALGDQML 263
N + +LR + PPR+ P L V + PV T + S ++L G+ +
Sbjct: 678 NVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCNATGAPSPTLMWLKDGNPVS 737
Query: 264 NA-----TVMNHGDTLTATATATARADQEGAREIVCNVTLGGERREARENLTVF-SFLGP 317
A V G LT A+ARA G V +G +R++ + + S LG
Sbjct: 738 PAGTPGLQVFPGGRVLTL---ASARASDSGRYSCVAVSAVGEDRQDVVLQVHMPPSILGE 794
Query: 318 IVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQP----------AQLQLNATES 367
+N+S A+E +V + C + A L P +P A LQ++ +
Sbjct: 795 ELNVSV-VANE--SVALECQSHAMPPPVLSWWKDGRPLEPRPGVHLSADKALLQVDRADV 851
Query: 368 DDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARG 427
D + C A + H N +V + ++ P + T ++ TR L C+ RG
Sbjct: 852 WDAGHYTCEALNQAGHSEKHYNLNVWVAPVF-PLRESHTLT--VREGHPTR--LSCECRG 906
Query: 428 NPYPELRCLKEGS---------SREVPVGIPFFV---NVTHNGTYQCQASSSRG 469
P+P++ K+G VG ++ + GTY C+ S+ G
Sbjct: 907 VPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQLAQEGTYTCECSNVVG 960
Score = 36.6 bits (83), Expect = 0.061
Identities = 39/140 (27%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 347 DGVPAAAPGQPAQLQ-----LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPK 401
DG+P QLQ + TE DD + C A E+ V + VL
Sbjct: 2973 DGLPLRGSHLRHQLQNGSLTIRRTERDDAGRYQCLAENEMGVA-----KKVVILVLQSAP 3027
Query: 402 IDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSS-------REVPVGIPFFVNV 454
+ + PQ + + L+CQA G P P + L+ G R +P G + NV
Sbjct: 3028 VFQVE-PQDMTVRSGDDVALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENV 3086
Query: 455 THN--GTYQCQASSSRGKYT 472
GTY C A + G T
Sbjct: 3087 ETGDAGTYDCVAHNLLGSAT 3106
Score = 36.2 bits (82), Expect = 0.079
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 359 QLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTR 418
QLQL +S D + C A+ V + +L V P I+ A ++ R
Sbjct: 275 QLQLGRAQSSDAGVYTCKASNAVGAA----EKATRLDVYVPPTIEGAGGRPYVVKAVAGR 330
Query: 419 HV-LQCQARGNPYPELRCLKEG----SSREVPVGIPFFV------NVTHNGTYQCQASSS 467
V L+C ARG+P P L EG S E + V +G Y C ASS
Sbjct: 331 PVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGLYSCVASSP 390
Query: 468 RGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVL 504
G+ L ++++ VP + V LG VT ++
Sbjct: 391 AGEAVLQYSVEVQ------VPPQLLVAEGLGQVTTIV 421
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 421 LQCQARGNPYPELRCLKEGSSREVPVGIPF----------FVNVTHNGTYQCQASSSRG 469
L CQA G+P P ++ L+ G E G+ V + H+G + CQA++ G
Sbjct: 427 LPCQASGSPVPTIQWLQNGRPAEELAGVQVASQGTTLHIDHVELDHSGLFACQATNEAG 485
Score = 34.7 bits (78), Expect = 0.23
Identities = 75/347 (21%), Positives = 120/347 (34%), Gaps = 71/347 (20%)
Query: 117 PERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEELSRQPAVEEPAEVTAT 176
P + L P P + L C + G+P+ ++T W ++ +E + T
Sbjct: 2220 PTELSLTPGAPME-------LLCDAQ-GTPQPNIT-----WHKDGQALTRLENNSRATR- 2265
Query: 177 VLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQL-----RTFVLPVTPPRLVAPRFL 231
VL RD ++C E V AP + FV+ + P +LV +
Sbjct: 2266 VLRVRD--AGLYTCLAESPAGAIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQLVLECSV 2323
Query: 232 EVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGARE 291
E E + + DG+ +A + L ++ D+ + TA A G+
Sbjct: 2324 EAEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARNAA---GSTS 2380
Query: 292 IVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGS-TVTVSCMAGARVQVTLDGVP 350
+ V + + PT G V VS A + DGVP
Sbjct: 2381 VAFRVEIH----------------------TVPTIRSGPPAVNVSVNQTALLPCQADGVP 2418
Query: 351 AAA-----------PGQP-------AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
A P P L++ + D + C A+ + R+
Sbjct: 2419 APLVSWRKDRVPLDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQGRD--- 2475
Query: 393 QLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEG 439
LRVL P I A P +L T +L C+A G+P P + K+G
Sbjct: 2476 -LRVLEPPAI--APSPSNLTLTAHTPALLPCEASGSPKPLVVWWKDG 2519
Score = 33.9 bits (76), Expect = 0.39
Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 261 QMLNATVMNHGDTLTATATATARADQEGAREIVCNVT-LGGERREARENLTVFSFLGPIV 319
Q+L A + + G A A + ++ T LGG A E +TV + PI
Sbjct: 1220 QVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV-TVNNPIS 1278
Query: 320 NLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAA-------PGQPAQLQLNATESDDGRS 372
+ E A +T DG P A PG LNA + D G+
Sbjct: 1279 LICEALAFPSPNITWM----------KDGAPFEASRNIQLLPGTHGLQILNAQKEDAGQ- 1327
Query: 373 FFCSATLEVDGEFLHRNSSVQLRVLYGPKIDR-----ATCPQHLKWKDKTRHVLQCQARG 427
+ C T E+ GE + + + VL P I + + +K K + L+C++
Sbjct: 1328 YTCVVTNEL-GEAV---KNYHVEVLIPPSISKDDPLAEVGVKEVKTKVNSTLTLECESWA 1383
Query: 428 NPYPELRCLKEG-----SSREVPVGIPFFV-----NVTHNGTYQCQASSSRGK 470
P P +R K+G SSR +G + V+ +G Y C A++ G+
Sbjct: 1384 VPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGE 1436
Score = 33.5 bits (75), Expect = 0.51
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 360 LQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKI--DRATCPQHLKWKDKT 417
LQ+ +++ + C A+ EV ++LH +L VL P I D + + +
Sbjct: 1524 LQIPLVRAENAGRYSCKASNEVGEDWLH----YELLVLTPPVILGDTEELVEEVTVNASS 1579
Query: 418 RHVLQCQARGNPYPELRCLKEG 439
LQC A GNP P + L+ G
Sbjct: 1580 TVSLQCPALGNPVPTISWLQNG 1601
Score = 33.1 bits (74), Expect = 0.67
Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 324 PTAHEGSTVTVSCMAGARVQVTLD--GVPA------------------AAPGQPAQLQLN 363
PT T TVS +AG+ + +T D GVPA + +LQL+
Sbjct: 1842 PTFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVSRGGRLQLS 1901
Query: 364 ATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQC 423
+ ++ C A + + VL P+I + + + L C
Sbjct: 1902 RLQPAQAGTYTCVA----ENTQAEARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDC 1957
Query: 424 QARGNPYPELRCLKEGSSREVPVG--IPFFVN----------VTHNGTYQCQASSSRGK 470
+A G P P++ LK+GS +G + F+++ + G Y C A + G+
Sbjct: 1958 EADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASDAGAYTCVAHNPAGE 2016
Score = 29.3 bits (64), Expect = 9.7
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 28/219 (12%)
Query: 282 ARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVN--LSEPTAHEGSTVTVSCMAG 339
A A E A +C + L V + P++ L + + EGS + C A
Sbjct: 2723 AHASPEDAGNYLCIAKNSAGSAMGKTRLVVQ--VPPVIENGLPDLSTTEGSHAFLPCKAR 2780
Query: 340 ARVQVTL----DGVPAA-APG----QPA-QLQLNATESDDGRSFFCSATLEVDGEFLHRN 389
+ + DG P + A G QP+ +L + E D ++ C+A V
Sbjct: 2781 GSPEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVG----RAR 2836
Query: 390 SSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPEL------RCLKEGSSRE 443
V L +L P + L+ D R L+C ARG+P P + R + EG S +
Sbjct: 2837 RRVHLTILVLPVFTTLPGDRSLRLGD--RLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQ 2894
Query: 444 VPVGI--PFFVNVTHNGTYQCQASSSRGKYTLVVVMDIE 480
V+ +GTY C A + G+ V + ++
Sbjct: 2895 DGGSTLQRAAVSREDSGTYVCWAENRVGRTQAVSFVHVK 2933
>gi|61742797 basal cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 588
Score = 42.4 bits (98), Expect = 0.001
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 328 EGSTVTVSCMAGARVQVTLDGVPAAAP---------GQPAQLQLNATESDDGRSFFCSAT 378
EG +++ + A V ++ G+P A G L L++ D ++ C A+
Sbjct: 368 EGKVLSLPLNSSAVVNCSVHGLPTPALRWTKDSTPLGDGPMLSLSSITFDSNGTYVCEAS 427
Query: 379 LEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHL--KWKDKTRHVLQCQARGNPYPELRCL 436
L L R + L V P++ A W++ L C ARG+P P+L
Sbjct: 428 LPTV-PVLSRTQNFTLLVQGSPELKTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWS 486
Query: 437 KEGSSREVP-------VGIPFFVNVT---HNGTYQCQASSSRG-KYTLVVVMDIEAGSSH 485
+ G S P V + VT C+AS+ G K + + +S
Sbjct: 487 QLGGSPAEPIPGRQGWVSSSLTLKVTSALSRDGISCEASNPHGNKRHVFHFGTVSPQTSQ 546
Query: 486 FVPVFVAVLLTLGVVTIVLALMYVFR 511
+AV +++G++ +V+A+ Y R
Sbjct: 547 AGVAVMAVAVSVGLLLLVVAVFYCVR 572
Score = 31.6 bits (70), Expect = 2.0
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 337 MAGARVQVTLDGVPAAAP----GQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
M G+ +QVT+ +P +L L + D R + C G ++
Sbjct: 83 MQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGT---AEATA 139
Query: 393 QLRVLYGPKIDRATCPQHLK--WKDKTRHVLQCQAR-GNPYPELRCLKEGSSREVPV 446
+L V P+ + + +D + + C +R GNP P++ + G EVPV
Sbjct: 140 RLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 196
>gi|31543106 basal cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 628
Score = 42.4 bits (98), Expect = 0.001
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 328 EGSTVTVSCMAGARVQVTLDGVPAAAP---------GQPAQLQLNATESDDGRSFFCSAT 378
EG +++ + A V ++ G+P A G L L++ D ++ C A+
Sbjct: 368 EGKVLSLPLNSSAVVNCSVHGLPTPALRWTKDSTPLGDGPMLSLSSITFDSNGTYVCEAS 427
Query: 379 LEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHL--KWKDKTRHVLQCQARGNPYPELRCL 436
L L R + L V P++ A W++ L C ARG+P P+L
Sbjct: 428 LPTV-PVLSRTQNFTLLVQGSPELKTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWS 486
Query: 437 KEGSSREVP-------VGIPFFVNVT---HNGTYQCQASSSRG-KYTLVVVMDIEAGSSH 485
+ G S P V + VT C+AS+ G K + + +S
Sbjct: 487 QLGGSPAEPIPGRQGWVSSSLTLKVTSALSRDGISCEASNPHGNKRHVFHFGTVSPQTSQ 546
Query: 486 FVPVFVAVLLTLGVVTIVLALMYVFR 511
+AV +++G++ +V+A+ Y R
Sbjct: 547 AGVAVMAVAVSVGLLLLVVAVFYCVR 572
Score = 31.6 bits (70), Expect = 2.0
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 337 MAGARVQVTLDGVPAAAP----GQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV 392
M G+ +QVT+ +P +L L + D R + C G ++
Sbjct: 83 MQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGT---AEATA 139
Query: 393 QLRVLYGPKIDRATCPQHLK--WKDKTRHVLQCQAR-GNPYPELRCLKEGSSREVPV 446
+L V P+ + + +D + + C +R GNP P++ + G EVPV
Sbjct: 140 RLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 196
>gi|4827022 contactin 2 precursor [Homo sapiens]
Length = 1040
Score = 41.2 bits (95), Expect = 0.002
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 326 AHEGSTVTVSC-----MAGARVQVTLDGVPAAAPGQ--------PAQLQLNATESDDGRS 372
AHEG V + C G + L+ P P L + T + D +
Sbjct: 145 AHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGN 204
Query: 373 FFCSATLEVD-------GEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQA 425
+ C AT +D +F N + + L+ P I +A P + L+C A
Sbjct: 205 YSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSI-KARFPAETYALVGQQVTLECFA 263
Query: 426 RGNPYPELRCLK-------EGSSREVPVGIPFFVNVTHNGTYQCQASSSRGKYTL 473
GNP P ++ K + ++ E + IP V+ GTY+C+A +S+G+ T+
Sbjct: 264 FGNPVPRIKWRKVDGSLSPQWTTAEPTLQIPS-VSFEDEGTYECEAENSKGRDTV 317
Score = 29.3 bits (64), Expect = 9.7
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 32/185 (17%)
Query: 322 SEPTAHEGSTVTVSCMAGARVQVTL-----DGV--PAAAPGQPAQLQLNATESDDGRSFF 374
+E A G VT+ C A + DG P +P LQ+ + +D ++
Sbjct: 247 AETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAEPT-LQIPSVSFEDEGTYE 305
Query: 375 CSATLE-----VDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNP 429
C A V G + + L+V+ + D + +L+W C A G P
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGS---NLRWG--------CAAAGKP 354
Query: 430 YPELRCLKEG------SSREVPVGIPFF--VNVTHNGTYQCQASSSRGKYTLVVVMDIEA 481
P +R L+ G + EV G F +++ +G YQC A + G + ++A
Sbjct: 355 RPTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Query: 482 GSSHF 486
+ F
Sbjct: 415 LAPDF 419
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 41.2 bits (95), Expect = 0.002
Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 39/254 (15%)
Query: 240 DCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTATATATARADQEGAREIVCNVTLG 299
+ T DG P+ + +V LGD+ N T+ H L + R + +
Sbjct: 78 ESTKDGKVPSEQKRVQF-LGDKNKNCTLSIHPVHLNDSGQLGLRMESKT----------- 125
Query: 300 GERREARENLTVFSFLGPIVNLSEPTAHEGSTVTVSCMAG-------ARVQVTLDGVP-- 350
E+ R +L V P P E VT++C+ ++Q L+GVP
Sbjct: 126 -EKWMERIHLNVSERPFPPHIQLPPEIQESQEVTLTCLLNFSCYGYPIQLQWLLEGVPMR 184
Query: 351 -AAAPGQP---------AQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGP 400
AA ++L+ + S G+ C + DG+FL N +VQL V + P
Sbjct: 185 QAAVTSTSLTIKSVFTRSELKFSPQWSHHGKIVTCQLQ-DADGKFLS-NDTVQLNVKHTP 242
Query: 401 KIDRATCPQHLKWKDKTRHVLQCQ-ARGNP-YPELRCLKEGSSREVPVGIPF---FVNVT 455
K++ P ++ + C+ + NP Y + LK+G+S + V
Sbjct: 243 KLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKD 302
Query: 456 HNGTYQCQASSSRG 469
+G Y CQ S+ G
Sbjct: 303 QSGKYCCQVSNDVG 316
Score = 33.5 bits (75), Expect = 0.51
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 355 GQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWK 414
G+ +QL ++ +D S+ C + + + L VLY P+ R + +
Sbjct: 551 GKESQLNFDSISPEDAGSYSCWVNNSIGQT---ASKAWTLEVLYAPRRLRVSMSPGDQVM 607
Query: 415 DKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPFF----VNVTHNGTYQCQASSSRGK 470
+ L C++ NP + +++ +P V V H+G Y CQ ++S GK
Sbjct: 608 EGKSATLTCESDANPPVSHYTWFDWNNQSLPYHSQKLRLEPVKVQHSGAYWCQGTNSVGK 667
>gi|21686977 cell adhesion molecule 4 [Homo sapiens]
Length = 388
Score = 40.0 bits (92), Expect = 0.006
Identities = 62/239 (25%), Positives = 92/239 (38%), Gaps = 34/239 (14%)
Query: 317 PIVNLSEPTAHEGSTVTVSCMAGA----------RVQVTLDGVPAAAPGQP-----AQLQ 361
P+V + E A EG V +SC+ R + L GV ++ + ++
Sbjct: 127 PVVEVREQ-AVEGGEVELSCLVPRSRPAATLRWYRDRKELKGVSSSQENGKVWSVASTVR 185
Query: 362 LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVL 421
DDG C A + + + L V Y P R Q + + T VL
Sbjct: 186 FRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTA-RIHASQAVVREGDTL-VL 243
Query: 422 QCQARGNPYPELRCLKEGSS----REVPVG----IPFFVNVTHNGTYQCQASSSRGK--- 470
C GNP P G+ R VG +P V+ NGTY C+AS+ G
Sbjct: 244 TCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSAD-NGTYTCEASNKHGHARA 302
Query: 471 -YTLVVV---MDIEAGSSHFVPVFVAVLLTLGVVTIVLALMYVFREHQRSGSYHVREES 525
Y LVV +EA +S + +L L + I + + V+ ++ GSY E S
Sbjct: 303 LYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGMVWCSVRQKGSYLTHEAS 361
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 40.0 bits (92), Expect = 0.006
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 358 AQLQLNATESDDGRSFFCSAT-LEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDK 416
A L+L S+D + C L+ + H S V L + P T PQ+++ K+
Sbjct: 96 ASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSWVHLTINAPPTFTE-TPPQYIEAKEG 154
Query: 417 TRHVLQCQARGNPYPELRCLKEGS------SREVPVGIPFFVNVTH--NGTYQCQASSSR 468
+ C A GNP P + LKEG+ +V G +V+ G Y C+A S +
Sbjct: 155 GSITMTCTAFGNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQ 214
Query: 469 GK 470
G+
Sbjct: 215 GE 216
>gi|5031927 skeletal muscle receptor tyrosine kinase [Homo sapiens]
Length = 869
Score = 38.9 bits (89), Expect = 0.012
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 362 LNATESDDGRSFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVL 421
L+ +SDDG + C+A V G S L+V PKI R P ++K + + VL
Sbjct: 87 LSVEDSDDG-IYCCTANNGVGGAV---ESCGALQVKMKPKITRP--PINVKIIEGLKAVL 140
Query: 422 QCQARGNPYPELRCLKEGSSREVPVGIPFFVNVT---HN------GTYQCQASSSRG-KY 471
C GNP P + +K S I + + HN G Y+C A +S G Y
Sbjct: 141 PCTTMGNPKPSVSWIKGDSPLRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAY 200
Query: 472 TLVVVMDIE 480
+ VV +++E
Sbjct: 201 SKVVKLEVE 209
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 38.5 bits (88), Expect = 0.016
Identities = 69/278 (24%), Positives = 98/278 (35%), Gaps = 29/278 (10%)
Query: 208 SAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVDCTLDGLFPASEAQVYLALGDQML---- 263
S P QL V P P L P + + P + T A L D +L
Sbjct: 112 SRPAQLHVLVPPEAPQVLGGPS-VSLVAGVPANLTCRSRGDARPTPELLWFRDGVLLDGA 170
Query: 264 --NATVMNHGD--TLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIV 319
+ T++ G ++ +T T T + +GA VC +T+ P V
Sbjct: 171 TFHQTLLKEGTPGSVESTLTLTPFSHDDGAT-FVCRARSQALPTGRDTAITLSLQYPPEV 229
Query: 320 NLSEP--TAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPA------QLQLNATESDDGR 371
LS T EG V C A A+ VT G A G P +L++ A S
Sbjct: 230 TLSASPHTVQEGEKVIFLCQATAQPPVT--GYRWAKGGSPVLGARGPRLEVVADASFLTE 287
Query: 372 SFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYP 431
C EV N S L VL+GP + P + + C RGNP P
Sbjct: 288 PVSC----EVSNAVGSANRSTALDVLFGPILQAKPEPVSVDVGEDAS--FSCAWRGNPLP 341
Query: 432 ELRCLKEGSSREVPVGIPF---FVNVTHNGTYQCQASS 466
+ + G ++ + G V G Y C+A +
Sbjct: 342 RVTWTRRGGAQVLGSGATLRLPSVGPEDAGDYVCRAEA 379
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 38.5 bits (88), Expect = 0.016
Identities = 69/278 (24%), Positives = 98/278 (35%), Gaps = 29/278 (10%)
Query: 208 SAPRQLRTFVLPVTPPRLVAPRFLEVETSWPVDCTLDGLFPASEAQVYLALGDQML---- 263
S P QL V P P L P + + P + T A L D +L
Sbjct: 62 SRPAQLHVLVPPEAPQVLGGPS-VSLVAGVPANLTCRSRGDARPTPELLWFRDGVLLDGA 120
Query: 264 --NATVMNHGD--TLTATATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIV 319
+ T++ G ++ +T T T + +GA VC +T+ P V
Sbjct: 121 TFHQTLLKEGTPGSVESTLTLTPFSHDDGAT-FVCRARSQALPTGRDTAITLSLQYPPEV 179
Query: 320 NLSEP--TAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPA------QLQLNATESDDGR 371
LS T EG V C A A+ VT G A G P +L++ A S
Sbjct: 180 TLSASPHTVQEGEKVIFLCQATAQPPVT--GYRWAKGGSPVLGARGPRLEVVADASFLTE 237
Query: 372 SFFCSATLEVDGEFLHRNSSVQLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYP 431
C EV N S L VL+GP + P + + C RGNP P
Sbjct: 238 PVSC----EVSNAVGSANRSTALDVLFGPILQAKPEPVSVDVGEDAS--FSCAWRGNPLP 291
Query: 432 ELRCLKEGSSREVPVGIPF---FVNVTHNGTYQCQASS 466
+ + G ++ + G V G Y C+A +
Sbjct: 292 RVTWTRRGGAQVLGSGATLRLPSVGPEDAGDYVCRAEA 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,976,230
Number of Sequences: 37866
Number of extensions: 1037704
Number of successful extensions: 3256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 2870
Number of HSP's gapped (non-prelim): 429
length of query: 547
length of database: 18,247,518
effective HSP length: 107
effective length of query: 440
effective length of database: 14,195,856
effective search space: 6246176640
effective search space used: 6246176640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.