Guide to the Human Genome
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Name: ICAM4 Sequence: fasta or formatted (272aa) NCBI GI: 85068578
Description:

intercellular adhesion molecule 4 isoform 3 precursor

Referenced in:

Additional Immunoglobulin-related Receptors
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [237aa] intercellular adhesion molecule 4 isoform 2 precursor
alt prot [271aa] intercellular adhesion molecule 4 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         20           3
 C cysteine            4.0         11           2
 D aspartate           2.9          8           1
 E glutamate           2.2          6           1
 F phenylalanine       2.9          8           2
 G glycine            10.7         29           2
 H histidine           2.9          8           1
 I isoleucine          0.7          2           1
 K lysine              4.0         11           2
 L leucine            10.7         29           2
 M methionine          1.8          5           1
 N asparagine          1.5          4           1
 P proline            10.7         29           2
 Q glutamine           4.8         13           2
 R arginine            9.9         27           2
 S serine              8.8         24           2
 T threonine           4.0         11           1
 V valine              5.9         16           1
 W tryptophan          2.2          6           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intercellular adhesion molecule 4 isoform 3 precurso... 
ICAM4                 0.450   intercellular adhesion molecule 4 isoform 1 precursor...
ICAM4                 0.450   intercellular adhesion molecule 4 isoform 2 precurso...
ICAM5                 0.085   intercellular adhesion molecule 5 precursor 
ICAM3                 0.056   intercellular adhesion molecule 3 precursor 
ICAM2                 0.045   intercellular adhesion molecule 2 precursor 
ICAM2                 0.045   intercellular adhesion molecule 2 precursor 
ICAM2                 0.045   intercellular adhesion molecule 2 precursor 
ICAM2                 0.045   intercellular adhesion molecule 2 precursor 
ICAM2                 0.045   intercellular adhesion molecule 2 precursor 
ICAM1                 0.029   intercellular adhesion molecule 1 precursor 
DISP2                 0.022   dispatched B 
LOC100293453          0.018   PREDICTED: hypothetical protein 
LOC100288459          0.018   PREDICTED: hypothetical protein 
LOC100288459          0.018   PREDICTED: hypothetical protein XP_002343705 
DUSP8                 0.014   dual specificity phosphatase 8 
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.011   tensin like C1 domain containing phosphatase isoform...
TNKS1BP1              0.011   tankyrase 1-binding protein 1 
LTBP2                 0.009   latent transforming growth factor beta binding protei...
ADAM19                0.009   ADAM metallopeptidase domain 19 preproprotein 
SRRM2                 0.009   splicing coactivator subunit SRm300 
RBCK1                 0.007   RanBP-type and C3HC4-type zinc finger containing 1 is...
RBCK1                 0.007   RanBP-type and C3HC4-type zinc finger containing 1 ...
LOC100291259          0.007   PREDICTED: hypothetical protein XP_002348181 
NEO1                  0.007   neogenin homolog 1 
NPHS1                 0.007   nephrin precursor 
MADCAM1               0.007   mucosal vascular addressin cell adhesion molecule 1...
MADCAM1               0.007   mucosal vascular addressin cell adhesion molecule 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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