Guide to the Human Genome
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Name: ICAM2 Sequence: fasta or formatted (275aa) NCBI GI: 153082699
Description:

intercellular adhesion molecule 2 precursor

Referenced in:

Additional Immunoglobulin-related Receptors

Other entries for this name:
alt mRNA [275aa] intercellular adhesion molecule 2 precursor
alt mRNA [275aa] intercellular adhesion molecule 2 precursor
alt mRNA [275aa] intercellular adhesion molecule 2 precursor
alt mRNA [275aa] intercellular adhesion molecule 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         15           2
 C cysteine            3.3          9           2
 D aspartate           3.3          9           1
 E glutamate           5.8         16           1
 F phenylalanine       5.5         15           1
 G glycine             5.5         15           2
 H histidine           3.3          9           1
 I isoleucine          3.6         10           2
 K lysine              4.0         11           2
 L leucine            10.9         30           2
 M methionine          2.2          6           1
 N asparagine          3.3          9           1
 P proline             5.5         15           2
 Q glutamine           5.1         14           2
 R arginine            5.1         14           2
 S serine              8.4         23           2
 T threonine           7.6         21           2
 V valine              9.5         26           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intercellular adhesion molecule 2 precursor 
ICAM2                 1.000   intercellular adhesion molecule 2 precursor 
ICAM2                 1.000   intercellular adhesion molecule 2 precursor 
ICAM2                 1.000   intercellular adhesion molecule 2 precursor 
ICAM2                 1.000   intercellular adhesion molecule 2 precursor 
ICAM3                 0.177   intercellular adhesion molecule 3 precursor 
ICAM5                 0.167   intercellular adhesion molecule 5 precursor 
ICAM1                 0.145   intercellular adhesion molecule 1 precursor 
ICAM4                 0.100   intercellular adhesion molecule 4 isoform 1 precursor...
ICAM4                 0.100   intercellular adhesion molecule 4 isoform 2 precurso...
ICAM4                 0.047   intercellular adhesion molecule 4 isoform 3 precurso...
VCAM1                 0.039   vascular cell adhesion molecule 1 isoform a precursor...
VCAM1                 0.030   vascular cell adhesion molecule 1 isoform b precurso...
HSPG2                 0.013   heparan sulfate proteoglycan 2 
NPHS1                 0.013   nephrin precursor 
NBPF6                 0.011   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF4                 0.011   neuroblastoma breakpoint family, member 4 
MRPL38                0.011   mitochondrial ribosomal protein L38 
TTN                   0.009   titin isoform N2-A 
CADM1                 0.009   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CADM1                 0.009   immunoglobulin superfamily, member 4D isoform 1 [Ho...
ABCC8                 0.009   ATP-binding cassette, sub-family C, member 8 
DCTN4                 0.009   dynactin 4 (p62) isoform c 
DCTN4                 0.009   dynactin 4 (p62) isoform a 
DCTN4                 0.009   dynactin 4 (p62) isoform b 
NBPF6                 0.008   neuroblastoma breakpoint family, member 6 isoform 1...
IGSF1                 0.008   immunoglobulin superfamily, member 1 isoform 1 [Homo...
FAM120B               0.008   family with sequence similarity 120B 
COPG                  0.006   coatomer protein complex, subunit gamma 1 
TDRD7                 0.006   tudor domain containing 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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