LSM14A 6866

Name: LSM14A	Sequence: fasta or formatted (463aa)		NCBI GI: 166197710
Description: LSM14 homolog A isoform b		Referenced in: RNases and RNA Stability
Other entries for this name: alt prot [463aa] LSM14 homolog A isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 29 2 C cysteine 0.9 4 1 D aspartate 5.6 26 2 E glutamate 6.9 32 2 F phenylalanine 5.2 24 2 G glycine 12.3 57 3 H histidine 1.1 5 1 I isoleucine 3.2 15 2 K lysine 5.2 24 1 L leucine 5.0 23 1 M methionine 1.1 5 1 N asparagine 3.9 18 1 P proline 7.3 34 2 Q glutamine 4.5 21 2 R arginine 10.2 47 2 S serine 9.7 45 2 T threonine 5.4 25 1 V valine 3.9 18 1 W tryptophan 0.2 1 1 Y tyrosine 2.2 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LSM14 homolog A isoform b LSM14A 0.988 LSM14 homolog A isoform a LSM14B 0.347 LSM14 homolog B EWSR1 0.032 Ewing sarcoma breakpoint region 1 isoform 4 GAR1 0.032 nucleolar protein family A, member 1 GAR1 0.032 nucleolar protein family A, member 1 NCL 0.028 nucleolin EWSR1 0.027 Ewing sarcoma breakpoint region 1 isoform 2 EWSR1 0.027 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.027 Ewing sarcoma breakpoint region 1 isoform 1 FBL 0.027 fibrillarin TAF15 0.024 TBP-associated factor 15 isoform 1 C1orf77 0.024 small protein rich in arginine and glycine TAF15 0.024 TBP-associated factor 15 isoform 2 FUS 0.024 fusion (involved in t(12;16) in malignant liposarcoma... FAM98B 0.024 family with sequence similarity 98, member B isofor... BRWD3 0.023 bromodomain and WD repeat domain containing 3 [Homo... SERBP1 0.022 SERPINE1 mRNA binding protein 1 isoform 4 SYNCRIP 0.021 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.021 synaptotagmin binding, cytoplasmic RNA interacting ... METTL14 0.020 methyltransferase like 14 ZC3H4 0.020 zinc finger CCCH-type containing 4 KRT9 0.019 keratin 9 KIAA1543 0.019 NEZHA isoform 2 KIAA1543 0.019 NEZHA isoform 1 FAM98A 0.017 hypothetical protein LOC25940 HNRNPA0 0.017 heterogeneous nuclear ribonucleoprotein A0 BAT2D1 0.017 HBxAg transactivated protein 2 HNRNPU 0.016 heterogeneous nuclear ribonucleoprotein U isoform b ... HNRNPU 0.016 heterogeneous nuclear ribonucleoprotein U isoform a ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.