Guide to the Human Genome
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Name: C12orf64 Sequence: fasta or formatted (2250aa) NCBI GI: 239744688
Description:

PREDICTED: hypothetical protein LOC283310

Not currently referenced in the text

Other entries for this name:
alt prot {2250aa} PREDICTED: chromosome 12 open reading frame 64
alt prot {2250aa} PREDICTED: chromosome 12 open reading frame 64
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         88           2
 C cysteine            9.2        207           2
 D aspartate           5.7        128           3
 E glutamate           6.4        143           2
 F phenylalanine       4.8        109           4
 G glycine             6.0        135           2
 H histidine           2.5         56           2
 I isoleucine          6.8        153           2
 K lysine              4.7        105           2
 L leucine             6.9        155           2
 M methionine          1.8         41           1
 N asparagine          4.7        106           2
 P proline             5.7        129           2
 Q glutamine           3.6         80           2
 R arginine            3.0         67           2
 S serine              7.5        169           3
 T threonine           5.9        133           2
 V valine              5.2        117           2
 W tryptophan          1.4         31           1
 Y tyrosine            4.4         98           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC283310 
C12orf64              1.000   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.999   PREDICTED: chromosome 12 open reading frame 64 [Hom...
OTOG                  0.235   PREDICTED: otogelin isoform 1 
OTOG                  0.235   PREDICTED: otogelin isoform 2 
OTOG                  0.235   PREDICTED: otogelin isoform 2 
OTOG                  0.233   PREDICTED: otogelin isoform 2 
OTOG                  0.233   PREDICTED: otogelin isoform 1 
OTOG                  0.233   PREDICTED: otogelin isoform 1 
LOC100132635          0.118   PREDICTED: similar to mucin 5, partial 
VWF                   0.114   von Willebrand factor preproprotein 
MUC2                  0.109   mucin 2 precursor 
MUC5B                 0.107   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.104   mucin 5AC 
SSPO                  0.090   SCO-spondin 
MUC6                  0.087   mucin 6, gastric 
LOC100291118          0.077   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.077   PREDICTED: hypothetical protein XP_002343203 
LOC100294420          0.064   PREDICTED: similar to mucin 2 
ZAN                   0.061   zonadhesin isoform 3 
ZAN                   0.061   zonadhesin isoform 6 
LOC100290309          0.060   PREDICTED: hypothetical protein XP_002348012 
FCGBP                 0.060   Fc fragment of IgG binding protein 
LOC100133944          0.057   PREDICTED: similar to Fc fragment of IgG binding pr...
TECTA                 0.057   tectorin alpha precursor 
LOC100293676          0.050   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100293409          0.046   PREDICTED: similar to Mucin-19 
BMPER                 0.028   BMP-binding endothelial regulator precursor protein ...
KCP                   0.024   cysteine rich BMP regulator 2 isoform 1 
LOC100293643          0.024   PREDICTED: similar to Fc fragment of IgG binding pr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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