Guide to the Human Genome
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Name: H2AFY2 Sequence: fasta or formatted (372aa) NCBI GI: 8923920
Description:

H2A histone family, member Y2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         37           2
 C cysteine            1.1          4           1
 D aspartate           4.0         15           2
 E glutamate           7.0         26           2
 F phenylalanine       3.0         11           1
 G glycine             8.3         31           2
 H histidine           1.9          7           1
 I isoleucine          5.6         21           1
 K lysine             12.4         46           3
 L leucine             9.1         34           2
 M methionine          1.6          6           1
 N asparagine          2.2          8           1
 P proline             4.8         18           3
 Q glutamine           2.7         10           1
 R arginine            4.6         17           1
 S serine             10.5         39           2
 T threonine           4.3         16           2
 V valine              5.1         19           1
 W tryptophan          0.3          1           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   H2A histone family, member Y2 
H2AFY                 0.679   H2A histone family, member Y isoform 3 
H2AFY                 0.676   H2A histone family, member Y isoform 2 
H2AFY                 0.676   H2A histone family, member Y isoform 2 
H2AFY                 0.655   H2A histone family, member Y isoform 1 
H2AFX                 0.183   H2A histone family, member X 
HIST2H2AB             0.179   histone cluster 2, H2ab 
HIST1H2AA             0.179   histone cluster 1, H2aa 
HIST2H2AA4            0.178   histone cluster 2, H2aa4 
HIST2H2AA3            0.178   histone cluster 2, H2aa3 
HIST2H2AC             0.178   histone cluster 2, H2ac 
HIST3H2A              0.176   histone cluster 3, H2a 
HIST1H2AC             0.176   histone cluster 1, H2ac 
HIST1H2AB             0.175   histone cluster 1, H2ab 
HIST1H2AE             0.175   histone cluster 1, H2ae 
HIST1H2AD             0.175   histone cluster 1, H2ad 
H2AFJ                 0.175   H2A histone family, member J 
HIST1H2AG             0.175   histone cluster 1, H2ag 
HIST1H2AI             0.175   histone cluster 1, H2ai 
HIST1H2AH             0.175   histone cluster 1, H2ah 
HIST1H2AK             0.175   histone cluster 1, H2ak 
HIST1H2AM             0.175   histone cluster 1, H2am 
HIST1H2AL             0.175   histone cluster 1, H2al 
HIST1H2AJ             0.175   histone cluster 1, H2aj 
H2AFZ                 0.138   H2A histone family, member Z 
H2AFV                 0.136   H2A histone family, member V isoform 1 
H2AFV                 0.113   H2A histone family, member V isoform 3 
H2AFV                 0.112   H2A histone family, member V isoform 2 
H2AFB2                0.069   H2A histone family, member B2 
H2AFB3                0.069   H2A histone family, member B3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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