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Search of human proteins with 164607128
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
(410 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164607128 solute carrier family 35, member E1 [Homo sapiens] 825 0.0
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 124 1e-28
gi|47827222 solute carrier family 35, member E4 [Homo sapiens] 66 5e-11
gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 64 2e-10
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 52 1e-06
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 52 1e-06
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 52 1e-06
gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-... 49 6e-06
gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 42 0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens] 37 0.032
gi|33469137 solute carrier family 35, member E2 [Homo sapiens] 36 0.055
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 35 0.16
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 34 0.21
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 34 0.21
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 34 0.21
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 34 0.21
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 34 0.21
gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo ... 34 0.27
gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo ... 34 0.27
gi|31542711 ANT2-binding protein [Homo sapiens] 34 0.27
gi|118402590 myosin XV [Homo sapiens] 33 0.36
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.36
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 33 0.47
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 33 0.47
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.47
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 33 0.47
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 33 0.47
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 33 0.47
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 33 0.47
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 33 0.47
>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
Length = 410
Score = 825 bits (2131), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 1 MAAAAVGAGHGAGGPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVT 60
MAAAAVGAGHGAGGPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVT
Sbjct: 1 MAAAAVGAGHGAGGPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVT 60
Query: 61 VSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKY 120
VSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKY
Sbjct: 61 VSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKY 120
Query: 121 FASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLAT 180
FASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLAT
Sbjct: 121 FASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLAT 180
Query: 181 VTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVL 240
VTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVL
Sbjct: 181 VTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVL 240
Query: 241 VDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRI 300
VDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRI
Sbjct: 241 VDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRI 300
Query: 301 MVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPVTTADLSSKER 360
MVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPVTTADLSSKER
Sbjct: 301 MVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPVTTADLSSKER 360
Query: 361 HRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV 410
HRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV
Sbjct: 361 HRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV 410
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 124 bits (312), Expect = 1e-28
Identities = 84/250 (33%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 104 PPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQST 163
PP F +L + ++ V VS+ V VS+A TVK++ PI+ V++SR+I+ E
Sbjct: 139 PPNFLMT-MLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGL 197
Query: 164 KVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDS--RIHHLR 221
V LSLIP++ G+ L T TE+SF++ G +AL+ + LQN+FSKK+L R
Sbjct: 198 LVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPE 257
Query: 222 LLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFS 281
L AV ++P V + S ++ Y LLLL G Q+V A++
Sbjct: 258 LQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLL-TDGVLFHLQSVTAYA 316
Query: 282 ILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQ 341
++ +SP+++SVA+ K + I +S+I+ N +TS + +G +GV LYNK + Q
Sbjct: 317 LMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKAR-QHQQ 375
Query: 342 QARKHLLPVT 351
+A + L T
Sbjct: 376 EALQSLAAAT 385
>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
Length = 350
Score = 66.2 bits (160), Expect = 5e-11
Identities = 80/353 (22%), Positives = 146/353 (41%), Gaps = 41/353 (11%)
Query: 4 AAVGAGHGAGGPGAASSSGGAREG---ARVAALCLLWYALSAGGNVVNKVILSAFPF--P 58
AA G AG P S A ARVA L+W A + +NK I + F P
Sbjct: 20 AAAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLLAGASMSSLNKWIFTVHGFGRP 79
Query: 59 VTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFG 118
+ +S H+L R P P + +L +L L FG
Sbjct: 80 LLLSALHMLVAALACHRGARR-------------PMPGGTRCRVL--------LLSLTFG 118
Query: 119 KYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLL 178
A +V + VP+ A V T P++ + LS +++ + ++ P+ G
Sbjct: 119 TSMAC--GNVGLRAVPLDLAQLVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAAC 176
Query: 179 ATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTW 238
+ E G LAAT L+++ +L++ R+ + LL +P++
Sbjct: 177 SLAGEFRTPPTGCGFLLAATCLRGLKSVQQSALLQEERLDAVTLLYATS-------LPSF 229
Query: 239 VLVDLSAFLVSSDL----TYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVA 294
L+ +A ++ + + T W +LL S + N+ +FS+L L S L+ V
Sbjct: 230 CLLAGAALVLEAGVAPPPTAGDSRLWACILL--SCLLSVLYNLASFSLLALTSALTVHVL 287
Query: 295 NATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHL 347
+ + +S ++ + +++ + +G+ + G+FLY+ ++ A+ AR+ L
Sbjct: 288 GNLTVVGNLILSRLLFGSRLSALSYVGIALTLSGMFLYHNCEFVASWAARRGL 340
>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
Length = 313
Score = 63.9 bits (154), Expect = 2e-10
Identities = 53/250 (21%), Positives = 111/250 (44%), Gaps = 15/250 (6%)
Query: 104 PPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQST 163
P P +L LA V ++S+ + KA ++ + ++ ST
Sbjct: 69 PKSLPPSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFST 128
Query: 164 KVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLL 223
++ L+LIPI GV+L + ++ F+ G+V A L SL ++ + +++ ++LL
Sbjct: 129 RIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLL 188
Query: 224 NILGCHAVFFMIP---TWVLVDLSAFLVSSDLTYVYQWPWT---LLLLAVSGFCNFAQNV 277
++ P +LV + F ++ PW+ LL++ +SG F N+
Sbjct: 189 --------YYQAPMSSAMLLVAVPFFEPVFGEGGIFG-PWSVSALLMVLLSGVIAFMVNL 239
Query: 278 IAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKY 337
+ I+ SP++Y++ K + + ++ ++P++ LG++ + G+ Y K
Sbjct: 240 SIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKL 299
Query: 338 DANQQARKHL 347
+ +R L
Sbjct: 300 SEQEGSRSKL 309
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 52.0 bits (123), Expect = 1e-06
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 34/304 (11%)
Query: 11 GAGGPGAASSSGGAR----EGARVAALCLLWYALSAGGNVVNKVILSA------FPFPVT 60
GA P A + + G + ++A + L++ S +NK +L + P VT
Sbjct: 18 GASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVT 77
Query: 61 VSLCHILAL-CAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGK 119
C + L C GL L PG PS L R VLPL+
Sbjct: 78 FYQCLVTTLLCKGLSALAACC----------PGAVDFPS---LRLDLRVARSVLPLSVVF 124
Query: 120 YFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLA 179
++ + V V++ + ++ ++ VLLS +++K+ S L+ II G L
Sbjct: 125 IGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLG 184
Query: 180 TV---TELSFDMWGLVSALAATLCFSLQNIFSKKVLR--DSRIHHLRLLNILGCHAVFFM 234
E + G V + A+LC SL I++ KVL D I L N + + F+
Sbjct: 185 VDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNA-CILFL 243
Query: 235 IPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVA 294
+L +L A + L + W ++ + G FA + + SPL+++V+
Sbjct: 244 PLLLLLGELQALRDFAQLGSAHFWG----MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299
Query: 295 NATK 298
K
Sbjct: 300 GTAK 303
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 52.0 bits (123), Expect = 1e-06
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 34/304 (11%)
Query: 11 GAGGPGAASSSGGAR----EGARVAALCLLWYALSAGGNVVNKVILSA------FPFPVT 60
GA P A + + G + ++A + L++ S +NK +L + P VT
Sbjct: 5 GASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVT 64
Query: 61 VSLCHILAL-CAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGK 119
C + L C GL L PG PS L R VLPL+
Sbjct: 65 FYQCLVTTLLCKGLSALAACC----------PGAVDFPS---LRLDLRVARSVLPLSVVF 111
Query: 120 YFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLA 179
++ + V V++ + ++ ++ VLLS +++K+ S L+ II G L
Sbjct: 112 IGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLG 171
Query: 180 TV---TELSFDMWGLVSALAATLCFSLQNIFSKKVLR--DSRIHHLRLLNILGCHAVFFM 234
E + G V + A+LC SL I++ KVL D I L N + + F+
Sbjct: 172 VDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNA-CILFL 230
Query: 235 IPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVA 294
+L +L A + L + W ++ + G FA + + SPL+++V+
Sbjct: 231 PLLLLLGELQALRDFAQLGSAHFWG----MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 286
Query: 295 NATK 298
K
Sbjct: 287 GTAK 290
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 52.0 bits (123), Expect = 1e-06
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 34/304 (11%)
Query: 11 GAGGPGAASSSGGAR----EGARVAALCLLWYALSAGGNVVNKVILSA------FPFPVT 60
GA P A + + G + ++A + L++ S +NK +L + P VT
Sbjct: 5 GASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVT 64
Query: 61 VSLCHILAL-CAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGK 119
C + L C GL L PG PS L R VLPL+
Sbjct: 65 FYQCLVTTLLCKGLSALAACC----------PGAVDFPS---LRLDLRVARSVLPLSVVF 111
Query: 120 YFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLA 179
++ + V V++ + ++ ++ VLLS +++K+ S L+ II G L
Sbjct: 112 IGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLG 171
Query: 180 TV---TELSFDMWGLVSALAATLCFSLQNIFSKKVLR--DSRIHHLRLLNILGCHAVFFM 234
E + G V + A+LC SL I++ KVL D I L N + + F+
Sbjct: 172 VDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNA-CILFL 230
Query: 235 IPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVA 294
+L +L A + L + W ++ + G FA + + SPL+++V+
Sbjct: 231 PLLLLLGELQALRDFAQLGSAHFWG----MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 286
Query: 295 NATK 298
K
Sbjct: 287 GTAK 290
>gi|14028875 solute carrier family 35 (UDP-glucuronic
acid/UDP-N-acetylgalactosamine dual transporter), member
D1 [Homo sapiens]
Length = 355
Score = 49.3 bits (116), Expect = 6e-06
Identities = 62/313 (19%), Positives = 134/313 (42%), Gaps = 43/313 (13%)
Query: 46 VVNKVILSAFPFPVTVSLCHILALCAGLPPLL---------RAWRVPPAPPVSGPGPSPH 96
VVNK +L+ + FP + LC GL ++ +A RV P +
Sbjct: 58 VVNKSVLTNYRFPSS--------LCVGLGQMVATVAVLWVGKALRVVKFPDLD------- 102
Query: 97 PSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRII 156
R PR PL + ++ S K+ + ++ ++ + ++
Sbjct: 103 ---------RNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVL 153
Query: 157 MKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSR 216
+K+ S + +++ +I G +A ++L+FD+ G L + + + K+ L DS+
Sbjct: 154 LKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKL-DSK 212
Query: 217 IHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQ-WPWTLLLLAVSGFCNFAQ 275
L +L +A+F ++PT + ++ F + ++ W TL LL + C
Sbjct: 213 --ELGKYGLLYYNALFMILPT---LAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGF 267
Query: 276 NVIAFSIL--NLVSPLSYSVANATKRIMVITVSLIMLRNPV-TSTNVLGMMTAILGVFLY 332
++ ++L S L+ ++ K I++ + ++ + + T TN +G+ +I G +Y
Sbjct: 268 ILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVY 327
Query: 333 NKTKYDANQQARK 345
+ + Q +++
Sbjct: 328 SYITFTEEQLSKQ 340
>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
Length = 322
Score = 42.0 bits (97), Expect = 0.001
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 142 KATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLL--------ATVTELSFDMWGLVS 193
K+ PI V+LL ++K+K YL ++ I++GV L + E + L+
Sbjct: 117 KSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLL 176
Query: 194 ALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSD-- 251
L+ TL L H+R G + + I W + L ++ +
Sbjct: 177 LLSLTL----------DGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGEL 226
Query: 252 ---LTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLI 308
L++ ++P + + + G + F + PL+ S+ T++ I S+I
Sbjct: 227 WEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVI 286
Query: 309 MLRNPVTSTNVLGMMTAILGVFL 331
+ NP++ +G + LG+ L
Sbjct: 287 LFANPISPMQWVGTVLVFLGLGL 309
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 37.0 bits (84), Expect = 0.032
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 3 AAAVGAGHGAG-------GPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAF 55
AA G G G G GPG + G A+ AAL +A + ++VN +
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226
Query: 56 PFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPP 105
P P + ++ PP + A PPAP P +P P++ PP
Sbjct: 227 PLPKPAAPGTVIQT----PPFVGA-AAPPAPAAPSPPAAPAPAAPAAAPP 271
>gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
Length = 266
Score = 36.2 bits (82), Expect = 0.055
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 104 PPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKE 159
PP F +L + ++ V VS+ V VS+A TVK++ PI+ V++SR+I+ E
Sbjct: 139 PPNFLMT-MLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 34.7 bits (78), Expect = 0.16
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 2 AAAAVGAGHGAGGPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTV 61
AAAA +G P A SG A GA AA + A +N +A
Sbjct: 289 AAAAAAELYGRAEPPFAPRSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAAAA------- 341
Query: 62 SLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHP 97
A AG P L+ PPAPP P P+ HP
Sbjct: 342 ------AAAAGPGPHLQHHAPPPAPPPP-PAPAQHP 370
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 34.3 bits (77), Expect = 0.21
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 60 TVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLP-PRFYPRYVLP 114
T C + L A LP PP P GP P+PHP PLLP P +P+ +LP
Sbjct: 325 TCPTCRMDVLRASLPAQSPP---PPEPADQGPPPAPHPP--PLLPQPPNFPQGLLP 375
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 34.3 bits (77), Expect = 0.21
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 60 TVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLP-PRFYPRYVLP 114
T C + L A LP PP P GP P+PHP PLLP P +P+ +LP
Sbjct: 325 TCPTCRMDVLRASLPAQSPP---PPEPADQGPPPAPHPP--PLLPQPPNFPQGLLP 375
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 34.3 bits (77), Expect = 0.21
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 24/122 (19%)
Query: 2 AAAAVGAGHGAGGPGAASSSG-------GAREGARVAALCLLWYALSAGGNVVNKVILSA 54
AAA G GAGG GAA +G R+ A C+ W + GG V L
Sbjct: 429 AAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPPRTPGGLPV-PTYLQP 487
Query: 55 FPFPVTVSLCHI-------------LALCAGLPPLLRAWRVPPAPP---VSGPGPSPHPS 98
P P + C + LA G A P PP +GPG P P
Sbjct: 488 PPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPP 547
Query: 99 SG 100
+G
Sbjct: 548 AG 549
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 34.3 bits (77), Expect = 0.21
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 24/122 (19%)
Query: 2 AAAAVGAGHGAGGPGAASSSG-------GAREGARVAALCLLWYALSAGGNVVNKVILSA 54
AAA G GAGG GAA +G R+ A C+ W + GG V L
Sbjct: 429 AAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPPRTPGGLPV-PTYLQP 487
Query: 55 FPFPVTVSLCHI-------------LALCAGLPPLLRAWRVPPAPP---VSGPGPSPHPS 98
P P + C + LA G A P PP +GPG P P
Sbjct: 488 PPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPP 547
Query: 99 SG 100
+G
Sbjct: 548 AG 549
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 34.3 bits (77), Expect = 0.21
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 24/122 (19%)
Query: 2 AAAAVGAGHGAGGPGAASSSG-------GAREGARVAALCLLWYALSAGGNVVNKVILSA 54
AAA G GAGG GAA +G R+ A C+ W + GG V L
Sbjct: 429 AAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPPRTPGGLPV-PTYLQP 487
Query: 55 FPFPVTVSLCHI-------------LALCAGLPPLLRAWRVPPAPP---VSGPGPSPHPS 98
P P + C + LA G A P PP +GPG P P
Sbjct: 488 PPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPP 547
Query: 99 SG 100
+G
Sbjct: 548 AG 549
>gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo
sapiens]
Length = 144
Score = 33.9 bits (76), Expect = 0.27
Identities = 42/116 (36%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 1 MAAAAVGAGHGAGGPGAASSSG---GAREGARVAALCLLWYALSAGGNVVNKVILSAFPF 57
MA A AG GA G SG GA R W+A A +++L A P
Sbjct: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
Query: 58 PVTVSLCHILALCAGLPPLLRAWRVPPAPPV--SGPGPSPHP--------SSGPLL 103
VSL A PP L A R PPAPPV G HP SSG LL
Sbjct: 61 GSRVSLGS--APGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALL 114
>gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo
sapiens]
Length = 144
Score = 33.9 bits (76), Expect = 0.27
Identities = 42/116 (36%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 1 MAAAAVGAGHGAGGPGAASSSG---GAREGARVAALCLLWYALSAGGNVVNKVILSAFPF 57
MA A AG GA G SG GA R W+A A +++L A P
Sbjct: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
Query: 58 PVTVSLCHILALCAGLPPLLRAWRVPPAPPV--SGPGPSPHP--------SSGPLL 103
VSL A PP L A R PPAPPV G HP SSG LL
Sbjct: 61 GSRVSLGS--APGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALL 114
>gi|31542711 ANT2-binding protein [Homo sapiens]
Length = 371
Score = 33.9 bits (76), Expect = 0.27
Identities = 47/255 (18%), Positives = 102/255 (40%), Gaps = 34/255 (13%)
Query: 107 FYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVY 166
F P LP A + +V++ S ++ + I+ L S + + +
Sbjct: 86 FNPLLFLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLGRRLVLSQW 145
Query: 167 LSLIPIISGVLLATVTEL----------SFDMWGLVSALAATLCFSLQNIFSKKVLRDSR 216
L ++ I+G+++ + +L S + G + + A + ++Q + +K +
Sbjct: 146 LGILATIAGLVVVGLADLLSKHDSQHKLSEVITGDLLIIMAQIIVAIQMVLEEKFVYKHN 205
Query: 217 IHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQN 276
+H LR + G F+I + +LV + S P L A+ FC Q
Sbjct: 206 VHPLRAVGTEGLFG--FVILSLLLVPMYYIPAGSFSGN----PRGTLEDALDAFCQVGQQ 259
Query: 277 -VIAFSILNLVSPLSY-----------------SVANATKRIMVITVSLIMLRNPVTSTN 318
+IA ++L +S +++ V ++ + +++ +SL + +
Sbjct: 260 PLIAVALLGNISSIAFFNFAGISVTKELSATTRMVLDSLRTVVIWALSLALGWEAFHALQ 319
Query: 319 VLGMMTAILGVFLYN 333
+LG + ++G LYN
Sbjct: 320 ILGFLILLIGTALYN 334
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 250 SDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIM 309
SD + Q P+ LL C+ + + LN+ S S+ + I S+
Sbjct: 76 SDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAF 135
Query: 310 LRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPVTTADL 355
L + + LG++ I G+ + + ++ L V T DL
Sbjct: 136 LGRRLVLSQWLGILATIAGLVVVGLADLLSKHDSQHKLSEVITGDL 181
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 33.5 bits (75), Expect = 0.36
Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 23/94 (24%)
Query: 56 PFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPP-RFYPRYVLP 114
P P +L H AL + PP VPP PP SGP P+P PL P PR P
Sbjct: 647 PQPAPRTLSHWSALLS--PP------VPPRPPSSGPPPAP-----PLSPALSGLPRPASP 693
Query: 115 LAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIW 148
+ S+ H W P AH A W
Sbjct: 694 ------YGSLRRHPPPWAAP---AHVPPAPQASW 718
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.5 bits (75), Expect = 0.36
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 74 PPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLP 114
PP + PP PP P P P+ +S PL P P Y+LP
Sbjct: 595 PPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLP 635
Score = 30.0 bits (66), Expect = 4.0
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Query: 83 PPAPPVSGPGPSPHP-----SSGPLLPP 105
PP PP P P+P P S PLLPP
Sbjct: 1133 PPEPPAGPPAPAPRPDERPSSPIPLLPP 1160
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 33.1 bits (74), Expect = 0.47
Identities = 38/114 (33%), Positives = 44/114 (38%), Gaps = 18/114 (15%)
Query: 2 AAAAVGA-GHGAGGPGA---ASSSGGAREGARVAALCLLWYALS-AGGNVVNKVILSAFP 56
AA A GA G G PG+ A G R LW + S AG LS
Sbjct: 38 AAGAAGARGSETGDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGTGGAEPPALS--- 94
Query: 57 FPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSG-------PGPSPHPSSGPLL 103
P S ++ G L W VPP PP+SG PG +P S PLL
Sbjct: 95 -PAPASPARPVSPAPGRR--LSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLL 145
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 33.1 bits (74), Expect = 0.47
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 71 AGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYP 109
AG PP+ PP PP SG GP+P P LPP P
Sbjct: 388 AGGPPMPPPPPPPPPPPSSGNGPAPPP-----LPPALVP 421
Score = 30.8 bits (68), Expect = 2.3
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 72 GLPPLLRAWRVPPAPPV---SGPGPSPHP-SSGPLLPP 105
G PP R PP PP SGP P P P + GP +PP
Sbjct: 358 GPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPP 395
Score = 30.4 bits (67), Expect = 3.0
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 72 GLPPLLRAWRVPPAPPVSGPGPSPHPS---SGPLLPP 105
G+ P R PP P GP P P P+ SGPL PP
Sbjct: 348 GIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 384
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.1 bits (74), Expect = 0.47
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 83 PPAPPVSG--PGPSPHPSSGPLLPPRFYPRYVLPLAFG 118
PPAPP G P P P P GP PP P V A G
Sbjct: 162 PPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHG 199
Score = 30.0 bits (66), Expect = 4.0
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 71 AGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYP 109
AG PP A PP P GP P P P P LPP P
Sbjct: 159 AGGPPAPPAGGPPPPP---GPPPPPGPPPPPGLPPSGVP 194
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
Query: 73 LPPL--------LRAWRVPPAPPVSGPGP-----SPHPSSGPLLPPRFYP 109
+PPL +R PP PP+S PGP SP S GPLL +P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHP 271
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
Query: 73 LPPL--------LRAWRVPPAPPVSGPGP-----SPHPSSGPLLPPRFYP 109
+PPL +R PP PP+S PGP SP S GPLL +P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHP 271
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
Query: 73 LPPL--------LRAWRVPPAPPVSGPGP-----SPHPSSGPLLPPRFYP 109
+PPL +R PP PP+S PGP SP S GPLL +P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHP 271
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 75 PLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLA 116
PLLR PAPP GPGP P P G + R Y Y P A
Sbjct: 640 PLLRH----PAPPGPGPGPGPGPGPGADM-QRSYDSYYYPAA 676
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 75 PLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLA 116
PLLR PAPP GPGP P P G + R Y Y P A
Sbjct: 648 PLLRH----PAPPGPGPGPGPGPGPGADM-QRSYDSYYYPAA 684
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,277,000
Number of Sequences: 37866
Number of extensions: 812259
Number of successful extensions: 11570
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 9785
Number of HSP's gapped (non-prelim): 1608
length of query: 410
length of database: 18,247,518
effective HSP length: 105
effective length of query: 305
effective length of database: 14,271,588
effective search space: 4352834340
effective search space used: 4352834340
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.