Guide to the Human Genome
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Name: SLC35E3 Sequence: fasta or formatted (313aa) NCBI GI: 56699411
Description:

solute carrier family 35, member E2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            1.9          6           1
 D aspartate           1.3          4           1
 E glutamate           1.6          5           1
 F phenylalanine       8.0         25           2
 G glycine             7.0         22           2
 H histidine           1.9          6           1
 I isoleucine          7.3         23           2
 K lysine              3.5         11           1
 L leucine            15.3         48           4
 M methionine          3.2         10           1
 N asparagine          4.2         13           2
 P proline             4.2         13           2
 Q glutamine           4.5         14           1
 R arginine            2.2          7           1
 S serine              6.7         21           2
 T threonine           5.8         18           2
 V valine              8.9         28           2
 W tryptophan          1.9          6           1
 Y tyrosine            4.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member E2 
LOC728661             0.098   similar to solute carrier family 35, member E2 [Hom...
SLC35E4               0.068   solute carrier family 35, member E4 
SLC35D2               0.065   solute carrier family 35, member D2 
SLC35E1               0.065   solute carrier family 35, member E1 
SLC35C2               0.055   solute carrier family 35, member C2 isoform a 
SLC35C2               0.055   solute carrier family 35, member C2 isoform a 
SLC35D1               0.055   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
SLC35C1               0.045   GDP-fucose transporter 1 isoform a 
SLC35C1               0.045   GDP-fucose transporter 1 isoform b 
SLC35C1               0.045   GDP-fucose transporter 1 isoform b 
SLC35C2               0.040   solute carrier family 35, member C2 isoform b 
SLC35B1               0.012   solute carrier family 35, member B1 
TRPC6                 0.008   transient receptor potential cation channel, subfamil...
ADORA1                0.007   adenosine A1 receptor 
ADORA1                0.007   adenosine A1 receptor 
LOC649660             0.007   PREDICTED: similar to transient receptor potential ...
LOC100287396          0.007   PREDICTED: hypothetical protein XP_002343076 
TAS2R7                0.005   taste receptor, type 2, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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