Guide to the Human Genome
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Name: SLC35E2 Sequence: fasta or formatted (266aa) NCBI GI: 33469137
Description:

solute carrier family 35, member E2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         16           3
 C cysteine            1.9          5           2
 D aspartate           2.3          6           1
 E glutamate           6.4         17           2
 F phenylalanine       4.9         13           3
 G glycine             7.5         20           2
 H histidine           1.9          5           1
 I isoleucine          3.0          8           1
 K lysine              3.8         10           1
 L leucine            12.8         34           2
 M methionine          3.8         10           1
 N asparagine          1.9          5           1
 P proline             7.5         20           2
 Q glutamine           2.3          6           1
 R arginine            5.6         15           2
 S serine             10.5         28           3
 T threonine           6.4         17           2
 V valine              8.6         23           2
 W tryptophan          1.1          3           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member E2 
LOC728661             0.717   similar to solute carrier family 35, member E2 [Hom...
SLC35E4               0.034   solute carrier family 35, member E4 
SLC35C1               0.030   GDP-fucose transporter 1 isoform a 
SLC35C1               0.030   GDP-fucose transporter 1 isoform b 
SLC35C1               0.030   GDP-fucose transporter 1 isoform b 
SLC35E1               0.022   solute carrier family 35, member E1 
SLC2A10               0.012   solute carrier family 2 member 10 
LOC731551             0.012   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC650354             0.012   PREDICTED: similar to ectonucleotide pyrophosphatas...
TSPYL1                0.010   TSPY-like 1 
ATP11B                0.010   ATPase, class VI, type 11B 
FAM117A               0.010   family with sequence similarity 117, member A 
BEND5                 0.010   BEN domain containing 5 
TMEM20                0.010   transmembrane protein 20 isoform 1 
TMEM20                0.010   transmembrane protein 20 isoform 2 
CATSPERG              0.008   hypothetical protein LOC57828 
CCDC102A              0.008   coiled-coil domain containing 102A 
FASLG                 0.008   fas ligand 
HUWE1                 0.008   HECT, UBA and WWE domain containing 1 
LOC100293375          0.006   PREDICTED: hypothetical protein 
PRX                   0.006   periaxin isoform 2 
C1orf65               0.006   hypothetical protein LOC164127 
PSRC1                 0.006   proline/serine-rich coiled-coil 1 isoform a 
PSRC1                 0.006   proline/serine-rich coiled-coil 1 isoform c 
PSRC1                 0.006   proline/serine-rich coiled-coil 1 isoform a 
LOC100292122          0.006   PREDICTED: hypothetical protein XP_002345138 
LOC100286986          0.006   PREDICTED: hypothetical protein XP_002344191 
ORC1L                 0.006   origin recognition complex, subunit 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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