Guide to the Human Genome
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Name: GPSM3 Sequence: fasta or formatted (160aa) NCBI GI: 11545817
Description:

G-protein signaling modulator 3 (AGS3-like, C. elegans)

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         10           1
 C cysteine            1.2          2           1
 D aspartate           2.5          4           1
 E glutamate          12.5         20           3
 F phenylalanine       0.6          1           1
 G glycine             6.2         10           3
 H histidine           1.9          3           1
 I isoleucine          0.6          1           1
 K lysine              0.0          0           0
 L leucine            12.5         20           3
 M methionine          1.9          3           1
 N asparagine          1.2          2           1
 P proline            15.6         25           4
 Q glutamine           8.8         14           1
 R arginine           10.0         16           2
 S serine              8.1         13           2
 T threonine           6.2         10           2
 V valine              1.2          2           1
 W tryptophan          1.2          2           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G-protein signaling modulator 3 (AGS3-like, C. elega... 
GPSM1                 0.078   G-protein signaling modulator 1 (AGS3-like, C. eleg...
GPSM1                 0.078   G-protein signaling modulator 1 (AGS3-like, C. eleg...
GPSM2                 0.065   LGN protein 
PWWP2A                0.052   PWWP domain containing 2A isoform b 
PWWP2A                0.052   PWWP domain containing 2A isoform a 
CIC                   0.045   capicua homolog 
SFI1                  0.039   spindle assembly associated Sfi1 homolog isoform a [...
SFI1                  0.039   spindle assembly associated Sfi1 homolog isoform b [...
FLJ20021              0.039   PREDICTED: hypothetical protein 
FLJ20021              0.039   PREDICTED: hypothetical protein 
FLJ20021              0.039   PREDICTED: hypothetical protein 
CCDC64B               0.036   coiled-coil domain containing 64B 
PRR12                 0.036   proline rich 12 
LRRC37B               0.036   leucine rich repeat containing 37B 
WAS                   0.032   Wiskott-Aldrich syndrome protein 
SOCS7                 0.032   suppressor of cytokine signaling 7 
FAM148B               0.032   nuclear localized factor 2 
IRS2                  0.032   insulin receptor substrate 2 
RBBP6                 0.032   retinoblastoma-binding protein 6 isoform 2 
HNRNPUL2              0.032   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
KIF18B                0.032   kinesin family member 18B 
C6orf132              0.029   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.029   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.029   PREDICTED: hypothetical protein LOC647024 
SCRIB                 0.029   scribble isoform b 
SCRIB                 0.029   scribble isoform a 
SYNJ1                 0.029   synaptojanin 1 isoform d 
PLEKHO1               0.029   pleckstrin homology domain containing, family O memb...
BCL6B                 0.029   B-cell CLL/lymphoma 6, member B (zinc finger protein...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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