Search of human proteins with 16306479

Search of human proteins with 16306479

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16306479 testis specific, 14 [Homo sapiens]
         (373 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16306479 testis specific, 14 [Homo sapiens]                        758   0.0  
gi|223468602 t-complex 10-like 2 [Homo sapiens]                        37   0.037
gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo ...    36   0.064
gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo ...    36   0.064
gi|34147456 TBC domain-containing protein kinase-like [Homo sapi...    36   0.064
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu...    34   0.19 
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec...    34   0.19 
gi|219803769 trichoplein [Homo sapiens]                                34   0.19 
gi|14150056 trichoplein [Homo sapiens]                                 34   0.19 
gi|105553088 t-complex 10 [Homo sapiens]                               34   0.24 
gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]         33   0.54 
gi|29826291 cancer susceptibility candidate 4 isoform b [Homo sa...    33   0.54 
gi|29826289 cancer susceptibility candidate 4 isoform a [Homo sa...    33   0.54 
gi|224809302 xeroderma pigmentosum, complementation group C isof...    32   0.92 
gi|224809295 xeroderma pigmentosum, complementation group C isof...    32   0.92 
gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [H...    32   1.2  
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ...    32   1.2  
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ...    32   1.2  
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom...    32   1.2  
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]        32   1.2  
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein...    32   1.2  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...    32   1.2  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...    32   1.2  
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    31   1.6  
gi|7661844 coiled-coil domain containing 22 [Homo sapiens]             31   1.6  
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        31   1.6  
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]               31   1.6  
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]               31   1.6  
gi|195234779 hypothetical protein LOC60686 [Homo sapiens]              31   2.1  

>gi|16306479 testis specific, 14 [Homo sapiens]
          Length = 373

 Score =  758 bits (1957), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MSLRRHIGNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKR 60
           MSLRRHIGNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKR
Sbjct: 1   MSLRRHIGNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKR 60

Query: 61  LKVTTFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSP 120
           LKVTTFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSP
Sbjct: 61  LKVTTFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSP 120

Query: 121 SPEQFINNAGAGDSSRSTLQSVISGVGELDLDKGPVKKAEPHTKDKPYPDCPFLLLDVRD 180
           SPEQFINNAGAGDSSRSTLQSVISGVGELDLDKGPVKKAEPHTKDKPYPDCPFLLLDVRD
Sbjct: 121 SPEQFINNAGAGDSSRSTLQSVISGVGELDLDKGPVKKAEPHTKDKPYPDCPFLLLDVRD 180

Query: 181 RDSYQQCHIVGAYSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMC 240
           RDSYQQCHIVGAYSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMC
Sbjct: 181 RDSYQQCHIVGAYSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMC 240

Query: 241 ERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSARKRSSPKGPPLPAENKW 300
           ERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSARKRSSPKGPPLPAENKW
Sbjct: 241 ERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSARKRSSPKGPPLPAENKW 300

Query: 301 RFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPR 360
           RFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPR
Sbjct: 301 RFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPR 360

Query: 361 SLSSGHLQGKPWK 373
           SLSSGHLQGKPWK
Sbjct: 361 SLSSGHLQGKPWK 373


>gi|223468602 t-complex 10-like 2 [Homo sapiens]
          Length = 353

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 23/141 (16%)

Query: 212 LEYKNAHGKIIILYDDDERLA------SQAATTMCERGFENLFMLSGGLKVLAQKFPEGL 265
           L  + A GKI  L  D+E         SQ+AT + +R   N       + +  ++   G 
Sbjct: 120 LALEPAFGKISPLSADEETTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGK 179

Query: 266 ITGSLPASCQQALPPGSARKRS-SPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHP 324
                P   ++  PPG  + RS +P G P P   +   +             E G   HP
Sbjct: 180 TP---PQEDREKSPPGRRQDRSPAPTGRPTPGAERREVS-------------EDGKIMHP 223

Query: 325 SRLNQANSSGRESKVPGARSA 345
           S  +  NS GR+S V  +++A
Sbjct: 224 SSRSLQNSGGRKSPVQASQAA 244


>gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo
           sapiens]
          Length = 144

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 269 SLPASCQQALP---PGS-ARKRSSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHP 324
           S PA  Q  LP   PGS     S+P  PP PA    R  P     I+       G A  P
Sbjct: 46  SFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQL----RGGDAHPP 101

Query: 325 SRLNQANSSGRESKVPGARSA---QNLPGGGPASHSNPR 360
              ++A SSG   + PGA  A   ++ PG G A   +PR
Sbjct: 102 PAFSRARSSGALLEHPGATCALLSRHGPGAGLAGEGSPR 140


>gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo
           sapiens]
          Length = 144

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 269 SLPASCQQALP---PGS-ARKRSSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHP 324
           S PA  Q  LP   PGS     S+P  PP PA    R  P     I+       G A  P
Sbjct: 46  SFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQL----RGGDAHPP 101

Query: 325 SRLNQANSSGRESKVPGARSA---QNLPGGGPASHSNPR 360
              ++A SSG   + PGA  A   ++ PG G A   +PR
Sbjct: 102 PAFSRARSSGALLEHPGATCALLSRHGPGAGLAGEGSPR 140


>gi|34147456 TBC domain-containing protein kinase-like [Homo
           sapiens]
          Length = 830

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 18/120 (15%)

Query: 153 KGPVKKAEPHTKDKPYPDCPFLLLDVRDRDSYQQCHIVGAYSYPIATL-----SRTMNPY 207
           K P KK +     KP      L++D+R+ + + + HI G+ + P +         T  PY
Sbjct: 718 KTPSKKTK---SSKP----KLLVVDIRNSEDFIRGHISGSINIPFSAAFTAEGELTQGPY 770

Query: 208 SNDILEYKNAHGKIIILYDDDERLASQAATTMCERGFENLFMLSGGLKVLAQKFPEGLIT 267
           +  +  +K   GK+I++     +  ++ A  + +  +  + +L GG+  +    P GL+T
Sbjct: 771 TAMLQNFK---GKVIVIVGHVAKHTAEFAAHLVKMKYPRICILDGGINKIK---PTGLLT 824


>gi|33598929 scavenger receptor class F, member 1 isoform 1
           precursor [Homo sapiens]
          Length = 830

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 86  EEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPS---PEQFINNAGAGDSSRSTLQSV 142
           + + R + +   AS    ++       G PG   P    PE+ +   GAG  S    Q  
Sbjct: 734 QALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQEP 793

Query: 143 ISGVGELDLDKGPVKKAEPHTKDKP 167
           +SG G  + D  P K+AE   +++P
Sbjct: 794 VSGCGSPEQD--PQKQAEEERQEEP 816


>gi|145309306 scavenger receptor class F, member 1 isoform 5
           precursor [Homo sapiens]
          Length = 744

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 86  EEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPS---PEQFINNAGAGDSSRSTLQSV 142
           + + R + +   AS    ++       G PG   P    PE+ +   GAG  S    Q  
Sbjct: 648 QALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQEP 707

Query: 143 ISGVGELDLDKGPVKKAEPHTKDKP 167
           +SG G  + D  P K+AE   +++P
Sbjct: 708 VSGCGSPEQD--PQKQAEEERQEEP 730


>gi|219803769 trichoplein [Homo sapiens]
          Length = 498

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 8   GNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTFA 67
           G  + + ++I QN R Q      ++     +    LEE+++  R +K+E  ++LK     
Sbjct: 382 GRQQQIQEKIEQNRRAQE-----ESLKHREQLIRNLEEVRELARREKEES-EKLKSARKQ 435

Query: 68  QLIIQVASL------SDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNP 115
           +L  QVA        +DQ  E   EE +R+E    A    +AET A    +  P
Sbjct: 436 ELEAQVAERRLQAWEADQQEEEEEEEARRVEQLSDALLQQEAETMAEQGYRPKP 489


>gi|14150056 trichoplein [Homo sapiens]
          Length = 498

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 8   GNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTFA 67
           G  + + ++I QN R Q      ++     +    LEE+++  R +K+E  ++LK     
Sbjct: 382 GRQQQIQEKIEQNRRAQE-----ESLKHREQLIRNLEEVRELARREKEES-EKLKSARKQ 435

Query: 68  QLIIQVASL------SDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNP 115
           +L  QVA        +DQ  E   EE +R+E    A    +AET A    +  P
Sbjct: 436 ELEAQVAERRLQAWEADQQEEEEEEEARRVEQLSDALLQQEAETMAEQGYRPKP 489


>gi|105553088 t-complex 10 [Homo sapiens]
          Length = 326

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 23/140 (16%)

Query: 212 LEYKNAHGKIIILYDDDERLA------SQAATTMCERGFENLFMLSGGLKVLAQKFPEGL 265
           L  + A GKI  L  D++         SQ+AT + +R   N       + +  ++   G 
Sbjct: 93  LALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGK 152

Query: 266 ITGSLPASCQQALPPGSARKRS-SPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHP 324
                P   ++  PPG  + RS +P G P P   + R   ED            G   HP
Sbjct: 153 TP---PQEDREKSPPGRRQDRSPAPTGRPTPGAER-RGVSED------------GKIMHP 196

Query: 325 SRLNQANSSGRESKVPGARS 344
           S  +  NS GR+S V  +++
Sbjct: 197 SSRSPQNSGGRKSPVQASQA 216


>gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]
          Length = 440

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 29/93 (31%), Positives = 34/93 (36%), Gaps = 13/93 (13%)

Query: 279 PPGSARKRSSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESK 338
           PPG+    + P G P P       TPED       LE     +D+   L QA        
Sbjct: 213 PPGTPPPSALPLGAPPPDALPPGPTPEDSPS----LETGSRQSDYMEALLQA-------- 260

Query: 339 VPGARSAQNLPGGGPASHSNPRSLSSGHLQGKP 371
            PG+     LPG G  SHS P      H    P
Sbjct: 261 -PGSSMEDPLPGPGSPSHSAPDPDGLPHFMETP 292


>gi|29826291 cancer susceptibility candidate 4 isoform b [Homo
           sapiens]
          Length = 380

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 20/101 (19%)

Query: 16  RIPQNPRYQ-----HIKSRL-DTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTF--- 66
           ++  N  YQ     H+K +L +      +  ++L++ +KN  Y    L KRL+  +F   
Sbjct: 111 KLQNNISYQMADIHHLKEQLAELRQEFLRQEDQLQDYRKNNTY----LVKRLEYESFQCG 166

Query: 67  -------AQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASD 100
                  AQ    +  L+DQ LE   +E Q+++ ND    D
Sbjct: 167 QQMKELRAQHEENIKKLADQFLEEQKQETQKIQSNDGKELD 207


>gi|29826289 cancer susceptibility candidate 4 isoform a [Homo
           sapiens]
          Length = 436

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 20/101 (19%)

Query: 16  RIPQNPRYQ-----HIKSRL-DTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTF--- 66
           ++  N  YQ     H+K +L +      +  ++L++ +KN  Y    L KRL+  +F   
Sbjct: 111 KLQNNISYQMADIHHLKEQLAELRQEFLRQEDQLQDYRKNNTY----LVKRLEYESFQCG 166

Query: 67  -------AQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASD 100
                  AQ    +  L+DQ LE   +E Q+++ ND    D
Sbjct: 167 QQMKELRAQHEENIKKLADQFLEEQKQETQKIQSNDGKELD 207


>gi|224809302 xeroderma pigmentosum, complementation group C isoform
           2 [Homo sapiens]
          Length = 903

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 315 EEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSG 365
           EE++GP D   +  Q    GRE +V    S +   G   A   +   LSSG
Sbjct: 363 EEDEGPGDKQEKATQRRPHGRERRVASRVSYKEESGSDEAGSGSDFELSSG 413


>gi|224809295 xeroderma pigmentosum, complementation group C isoform
           1 [Homo sapiens]
          Length = 940

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 315 EEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSG 365
           EE++GP D   +  Q    GRE +V    S +   G   A   +   LSSG
Sbjct: 400 EEDEGPGDKQEKATQRRPHGRERRVASRVSYKEESGSDEAGSGSDFELSSG 450


>gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [Homo
           sapiens]
          Length = 862

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 294 LPAENKWRFTPEDLKKIEYYLEEEQGPADHPSRLNQANSS 333
           LP    W F P+D+ ++ + L +  G    PSR+ Q  +S
Sbjct: 770 LPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQMFAS 809


>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 315 EEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGH 366
           ++ Q P  HPS   +A  S   S +P  R      G GP   + P  LS+GH
Sbjct: 212 QQPQQPPRHPSHARRAAGSPELSWLPRGRKGT---GPGPGRAARPLGLSAGH 260


>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
           sapiens]
          Length = 346

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 315 EEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGH 366
           ++ Q P  HPS   +A  S   S +P  R      G GP   + P  LS+GH
Sbjct: 277 QQPQQPPRHPSHARRAAGSPELSWLPRGRKGT---GPGPGRAARPLGLSAGH 325


>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
           sapiens]
          Length = 346

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 315 EEEQGPADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGH 366
           ++ Q P  HPS   +A  S   S +P  R      G GP   + P  LS+GH
Sbjct: 277 QQPQQPPRHPSHARRAAGSPELSWLPRGRKGT---GPGPGRAARPLGLSAGH 325


>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
           sapiens]
          Length = 1551

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 68  QLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFIN 127
           +L  QV+SLS Q  ++  +  QRLE++  A +     T + TNG G P E  P   Q   
Sbjct: 556 ELEAQVSSLSRQVTQLQGQWEQRLEESSQAKT---IHTASETNGMG-PPEGGPQEAQLRK 611

Query: 128 NAGA 131
              A
Sbjct: 612 EVAA 615


>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
          Length = 1302

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 272 ASCQQALPPGSARKRSSPKGPPLP 295
           AS  QA+P  S+R+R S  GPPLP
Sbjct: 357 ASSPQAVPASSSRQRPSSTGPPLP 380


>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
           [Homo sapiens]
          Length = 480

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 21/110 (19%)

Query: 271 PASCQQALPPGSARK-----------RSSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQG 319
           P +   A PPGS R+           RS  +GPP PA    +    + KK +Y +   Q 
Sbjct: 149 PPTPPTAPPPGSPRRSEGHPDPPTESRSCSQGPPSPASPDPKAC--NWKKYKYIVLNSQ- 205

Query: 320 PADHPSRLNQANSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGHLQG 369
            A     L    SSG+    P AR    LP G  AS S+  S SS   +G
Sbjct: 206 -ASQAGSLVGERSSGQ--PCPQAR----LPSGDEASSSSSSSSSSSSEEG 248


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 76  LSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFINNAGAGDSS 135
           L + T+++   E++ ++ ND+  S    +   +     NPG + P PE F  + G     
Sbjct: 109 LLEDTVKILRVEVEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQ 168

Query: 136 RSTLQSVISGVGELDLDKG 154
              L S  +G   LD+  G
Sbjct: 169 GYQLNS--NGYFSLDVQSG 185


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 76  LSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFINNAGAGDSS 135
           L + T+++   E++ ++ ND+  S    +   +     NPG + P PE F  + G     
Sbjct: 109 LLEDTVKILRVEVEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQ 168

Query: 136 RSTLQSVISGVGELDLDKG 154
              L S  +G   LD+  G
Sbjct: 169 GYQLNS--NGYFSLDVQSG 185


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 87   EIQRLEDNDSAASDPDAETTARTNGKGNPGEQS 119
            ++  L  + S A  PD ETT+ T+G G PG ++
Sbjct: 3556 KVSHLRTSSSEAHIPDQETTSLTSGTGTPGAEA 3588


>gi|7661844 coiled-coil domain containing 22 [Homo sapiens]
          Length = 627

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%)

Query: 23  YQHIKSRLDT---GNSMTKYTEKLEEIKKNYRYKKDELFKRLKVTTFAQLIIQVASLS-- 77
           Y+ + S L+T     S   YT+++ EI  N R +K+E+ K L  T   +L  ++ SLS  
Sbjct: 474 YKQLMSELETLPRDVSRLAYTQRILEIVGNIRKQKEEITKILSDT--KELQKEINSLSGK 531

Query: 78  -DQTLEVTAEEIQRLEDNDSA 97
            D+T  VT E + +    D A
Sbjct: 532 LDRTFAVTDELVFKDAKKDDA 552


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 22/155 (14%)

Query: 229 ERLASQAATTMCERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSARKRSS 288
           E+L S A T   + G ++  + +  L     K P+G +  +LPAS     PP    K SS
Sbjct: 408 EKLPSPALTQQPQFGPQSSILAN--LMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSS 465

Query: 289 PKGPPLPAENKWRFTPE-----DLKKIEYYLEEEQGPADHPSRLN------QANSSGRES 337
              P LP ++   FTP+      L      L ++Q       + N       +NSS   S
Sbjct: 466 ---PGLPQQS---FTPQCSLIRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLS 519

Query: 338 KVPGARSAQNLPGG-GPASHSNPRSLSSGHLQGKP 371
            +     A + PG   P +  N + LS  H   +P
Sbjct: 520 MIMQQGMASSSPGATEPFTFGNTKPLS--HFVSEP 552


>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
          Length = 1184

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 19/138 (13%)

Query: 225 YDDDERLASQAATTMCERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSAR 284
           Y  D+ +A   A T    G E   + +G ++  A   P  L  GS P S  QA P  +  
Sbjct: 197 YSYDQEVAEVEAATAL--GGE---VQAGAVQAGAGGPPAALGGGSQPLSTIQAPPWPAVL 251

Query: 285 KR---SSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPG 341
            R   ++  GPP P + K R   ED ++     EEE+        + +  ++G      G
Sbjct: 252 PRPTAAAALGPPAPVQAKARRVTEDSEE-----EEEEEEEREEMAVTEQLAAG------G 300

Query: 342 ARSAQNLPGGGPASHSNP 359
            R    LP   PA  S P
Sbjct: 301 HRGLDGLPTTAPAGPSLP 318


>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
          Length = 1231

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 19/138 (13%)

Query: 225 YDDDERLASQAATTMCERGFENLFMLSGGLKVLAQKFPEGLITGSLPASCQQALPPGSAR 284
           Y  D+ +A   A T    G E   + +G ++  A   P  L  GS P S  QA P  +  
Sbjct: 197 YSYDQEVAEVEAATAL--GGE---VQAGAVQAGAGGPPAALGGGSQPLSTIQAPPWPAVL 251

Query: 285 KR---SSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGPADHPSRLNQANSSGRESKVPG 341
            R   ++  GPP P + K R   ED ++     EEE+        + +  ++G      G
Sbjct: 252 PRPTAAAALGPPAPVQAKARRVTEDSEE-----EEEEEEEREEMAVTEQLAAG------G 300

Query: 342 ARSAQNLPGGGPASHSNP 359
            R    LP   PA  S P
Sbjct: 301 HRGLDGLPTTAPAGPSLP 318


>gi|195234779 hypothetical protein LOC60686 [Homo sapiens]
          Length = 538

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 62  KVTTFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPS 121
           K    A+  + +A  +++ L+   EE+  L     +  D D E+ A ++    PG    S
Sbjct: 71  KAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSPPEEPGPLKES 130

Query: 122 PEQFINNAGA----GDSSRSTLQSVISGVGELD-LDKGPVKKAEPHT-KDKPYPDC 171
           P +      A     DS  S +Q VI  + +L     GP     P T +D   P C
Sbjct: 131 PGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRDMRLPGC 186


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.130    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,360,167
Number of Sequences: 37866
Number of extensions: 855857
Number of successful extensions: 3310
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 3270
Number of HSP's gapped (non-prelim): 118
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.