CASC4 25088

Name: CASC4	Sequence: fasta or formatted (436aa)		NCBI GI: 29826289
Description: cancer susceptibility candidate 4 isoform a		Referenced in: Mammary Tissues
Other entries for this name: alt prot [380aa] cancer susceptibility candidate 4 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 23 1 C cysteine 0.5 2 1 D aspartate 8.3 36 2 E glutamate 9.6 42 3 F phenylalanine 2.1 9 2 G glycine 6.2 27 2 H histidine 3.4 15 2 I isoleucine 4.1 18 1 K lysine 7.1 31 2 L leucine 9.9 43 4 M methionine 1.4 6 1 N asparagine 6.2 27 2 P proline 5.3 23 2 Q glutamine 8.7 38 2 R arginine 5.5 24 2 S serine 6.2 27 2 T threonine 1.8 8 1 V valine 6.0 26 2 W tryptophan 0.2 1 1 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cancer susceptibility candidate 4 isoform a CASC4 0.811 cancer susceptibility candidate 4 isoform b GOLM1 0.120 golgi membrane protein 1 GOLM1 0.120 golgi membrane protein 1 LOC100293491 0.053 PREDICTED: similar to golgi membrane protein 1 [Hom... MYH15 0.031 myosin, heavy polypeptide 15 MYH14 0.028 myosin, heavy chain 14 isoform 1 MYH14 0.028 myosin, heavy chain 14 isoform 2 MYH14 0.028 myosin, heavy chain 14 isoform 3 KIAA1026 0.028 kazrin isoform B CENPF 0.028 centromere protein F KIAA1026 0.027 kazrin isoform E KIAA1026 0.027 kazrin isoform A MYH2 0.027 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.027 myosin, heavy chain 2, skeletal muscle, adult [Homo... FAM184A 0.026 hypothetical protein LOC79632 isoform 2 FAM184A 0.026 hypothetical protein LOC79632 isoform 1 MNS1 0.025 meiosis-specific nuclear structural 1 GOLGB1 0.025 golgi autoantigen, golgin subfamily b, macrogolgin ... TACC3 0.023 transforming, acidic coiled-coil containing protein 3... MYH1 0.023 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH9 0.022 myosin, heavy polypeptide 9, non-muscle PPFIA1 0.022 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.022 PTPRF interacting protein alpha 1 isoform b MYH3 0.022 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... KIF3A 0.022 kinesin family member 3A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.