Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 162329583
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|162329583 cleavage and polyadenylation specific factor 6, 68
kD subunit [Homo sapiens]
(551 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 1177 0.0
gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 362 e-100
gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 361 e-100
gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 361 e-100
gi|160707881 formin 2 [Homo sapiens] 140 4e-33
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 135 1e-31
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 134 3e-31
gi|7706501 WW domain binding protein 11 [Homo sapiens] 120 2e-27
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 120 3e-27
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 120 3e-27
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 119 9e-27
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 112 1e-24
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 110 4e-24
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 108 1e-23
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 108 1e-23
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 108 1e-23
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 108 1e-23
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 107 4e-23
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 107 4e-23
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 107 4e-23
gi|150417989 cyclin K isoform 1 [Homo sapiens] 106 6e-23
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 105 1e-22
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 105 1e-22
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 104 2e-22
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 103 5e-22
gi|146134388 YLP motif containing 1 [Homo sapiens] 103 5e-22
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 102 7e-22
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 102 7e-22
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 102 9e-22
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 101 2e-21
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 1177 bits (3046), Expect = 0.0
Identities = 551/551 (100%), Positives = 551/551 (100%)
Query: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
Sbjct: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
Query: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
Sbjct: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
Query: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
Sbjct: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
Query: 181 SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP 240
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
Sbjct: 181 SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP 240
Query: 241 LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV 300
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
Sbjct: 241 LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV 300
Query: 301 PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA 360
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
Sbjct: 301 PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA 360
Query: 361 FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR 420
FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR
Sbjct: 361 FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR 420
Query: 421 NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI 480
NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI
Sbjct: 421 NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI 480
Query: 481 ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR 540
ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR
Sbjct: 481 ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR 540
Query: 541 ERDREREYRHR 551
ERDREREYRHR
Sbjct: 541 ERDREREYRHR 551
>gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3
[Homo sapiens]
Length = 462
Score = 362 bits (928), Expect = e-100
Identities = 244/554 (44%), Positives = 303/554 (54%), Gaps = 110/554 (19%)
Query: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 61 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 114
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 115 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 174
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 175 TQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQ 234
PP SR + GR A P + P A PP P
Sbjct: 176 I------------PPRAHSRDS-SDSADGR-----ATPSENLVPSSARVDKPPSVLPYFN 217
Query: 235 TPPR--PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
PP P +G P PP PP PPPL+ + G PPPP + L P
Sbjct: 218 RPPSALPLMGLPPPPIPP---------PPPLSS--SFGVPPPPPGIH------YQHLMPP 260
Query: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
PP PP + PPPG PP P F P P +GPP P A
Sbjct: 261 PPRLPPHLA--VPPPGAIPPALHLNP---AFFPPPNATVGPP---------PDTYMKASA 306
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEA 412
P H S GPPP + +SEA
Sbjct: 307 PYNHHG--------------SRDSGPPP--------------------------STVSEA 326
Query: 413 EFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISS 472
EFE+IM RNRAISSSAIS+AVS ASAGDY AIETL+TAI++IKQS+V+ D+RC+VLISS
Sbjct: 327 EFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLISS 386
Query: 473 LQDCLHGIESKSY-----GSGSR-RERSRERDHSRSREKSRRHKS--RSRDRHDDYYRER 524
L+DCLHGIE+KSY GS SR R RSRER SRSRE SRRH+ + DRHDDY++ER
Sbjct: 387 LKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQER 446
Query: 525 SRERERHRDRDRDR 538
+RE ERHRDR+RDR
Sbjct: 447 NREHERHRDRERDR 460
>gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform 2
[Homo sapiens]
Length = 471
Score = 361 bits (927), Expect = e-100
Identities = 245/554 (44%), Positives = 304/554 (54%), Gaps = 101/554 (18%)
Query: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 61 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 114
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 115 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 174
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 175 TQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQ 234
G PP SR + GR A P + P A PP P
Sbjct: 176 ECVRVPRG---GIPPRAHSRDS-SDSADGR-----ATPSENLVPSSARVDKPPSVLPYFN 226
Query: 235 TPPR--PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
PP P +G P PP PP PPPL+ + G PPPP + L P
Sbjct: 227 RPPSALPLMGLPPPPIPP---------PPPLSS--SFGVPPPPPGIH------YQHLMPP 269
Query: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
PP PP + PPPG PP P F P P +GPP P A
Sbjct: 270 PPRLPPHLA--VPPPGAIPPALHLNP---AFFPPPNATVGPP---------PDTYMKASA 315
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEA 412
P H S GPPP + +SEA
Sbjct: 316 PYNHHG--------------SRDSGPPP--------------------------STVSEA 335
Query: 413 EFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISS 472
EFE+IM RNRAISSSAIS+AVS ASAGDY AIETL+TAI++IKQS+V+ D+RC+VLISS
Sbjct: 336 EFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLISS 395
Query: 473 LQDCLHGIESKSY-----GSGSR-RERSRERDHSRSREKSRRHKS--RSRDRHDDYYRER 524
L+DCLHGIE+KSY GS SR R RSRER SRSRE SRRH+ + DRHDDY++ER
Sbjct: 396 LKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQER 455
Query: 525 SRERERHRDRDRDR 538
+RE ERHRDR+RDR
Sbjct: 456 NREHERHRDRERDR 469
>gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform 1
[Homo sapiens]
Length = 514
Score = 361 bits (927), Expect = e-100
Identities = 245/554 (44%), Positives = 304/554 (54%), Gaps = 101/554 (18%)
Query: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 44 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 98
Query: 61 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 114
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 99 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 158
Query: 115 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 174
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 159 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 218
Query: 175 TQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQ 234
G PP SR + GR A P + P A PP P
Sbjct: 219 ECVRVPRG---GIPPRAHSRDS-SDSADGR-----ATPSENLVPSSARVDKPPSVLPYFN 269
Query: 235 TPPR--PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
PP P +G P PP PP PPPL+ + G PPPP + L P
Sbjct: 270 RPPSALPLMGLPPPPIPP---------PPPLSS--SFGVPPPPPGIH------YQHLMPP 312
Query: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
PP PP + PPPG PP P F P P +GPP P A
Sbjct: 313 PPRLPPHLA--VPPPGAIPPALHLNP---AFFPPPNATVGPP---------PDTYMKASA 358
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEA 412
P H S GPPP + +SEA
Sbjct: 359 PYNHHG--------------SRDSGPPP--------------------------STVSEA 378
Query: 413 EFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISS 472
EFE+IM RNRAISSSAIS+AVS ASAGDY AIETL+TAI++IKQS+V+ D+RC+VLISS
Sbjct: 379 EFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLISS 438
Query: 473 LQDCLHGIESKSY-----GSGSR-RERSRERDHSRSREKSRRHKS--RSRDRHDDYYRER 524
L+DCLHGIE+KSY GS SR R RSRER SRSRE SRRH+ + DRHDDY++ER
Sbjct: 439 LKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQER 498
Query: 525 SRERERHRDRDRDR 538
+RE ERHRDR+RDR
Sbjct: 499 NREHERHRDRERDR 512
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 140 bits (352), Expect = 4e-33
Identities = 94/208 (45%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 208 PGAVPGGDRFPGPAGPGG---PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P +PG P P PG PPPP P PP PPL PG PP PP PG +PPP
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL--PGAGIPPPPPLPGAGIPPP-P 1100
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG-PPPPP 320
P G PPPP+ PG G PP PLP PPPP+PG G PP PP P+ G PPPPP
Sbjct: 1101 PLPGVGIPPPPPL--PGA--GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPP 1156
Query: 321 GPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPPPAPHVNPAFFPPPTNSGMP 371
P PP P P + PPP LPG PPP G PPP P PPP GM
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMG 1216
Query: 372 TSDSRGPP-PTDPYGRPPPYDRGDYGPP 398
+ PP P G PPP GPP
Sbjct: 1217 IPPAPAPPLPPPGTGIPPPPLLPVSGPP 1244
Score = 138 bits (348), Expect = 1e-32
Identities = 95/217 (43%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 189 PGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGG---PPPPFPAGQTPPRPPLGPPG 245
PG + P G G P +PG P P PG PPPP P PP PPL PG
Sbjct: 949 PGAAIPPPPPLPGAGIP-LPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL--PG 1005
Query: 246 PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPG 302
PP PP PG +PPP P G PPPP+ PG G PP PLP PPPP+PG
Sbjct: 1006 AGIPPPPPLPGAGIPPP-PPLPGAGIPPPPPL--PGA--GIPPPPPLPGAGIPPPPPLPG 1060
Query: 303 YGPPPGPPPPQQG-PPPPPGPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPP 352
G PP PP P G PPPPP P PP P P + PPP LPG PPP G PP
Sbjct: 1061 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPP 1120
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
P P PPP +P + PPP G PPP
Sbjct: 1121 PPPLPGAGIPPPPP---LPGAGIPPPPPLPRVGIPPP 1154
Score = 137 bits (346), Expect = 2e-32
Identities = 90/198 (45%), Positives = 97/198 (48%), Gaps = 26/198 (13%)
Query: 208 PGAVPGGDRFPGPAGPGG---PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P +PG P P PG PPPP P PP PPL PG PP PP PG +PPP
Sbjct: 978 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL--PGAGIPPPPPLPGAGIPPP-P 1034
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG-PPPPP 320
P G PPPP+ PG G PP PLP PPPP+PG G PP PP P G PPPPP
Sbjct: 1035 PLPGAGIPPPPPL--PGA--GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1090
Query: 321 GPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPPPAPHVNPAFFPPPTNSGMP 371
P PP P P + + PPP LPG PPP G PPP P PPP +P
Sbjct: 1091 LPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---LP 1147
Query: 372 TSDSRGPPPTDPYGRPPP 389
PPP G PPP
Sbjct: 1148 RVGIPPPPPLPGAGIPPP 1165
Score = 137 bits (346), Expect = 2e-32
Identities = 90/198 (45%), Positives = 97/198 (48%), Gaps = 26/198 (13%)
Query: 208 PGAVPGGDRFPGPAGPGG---PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P +PG P P PG PPPP P PP PPL PG PP PP PG +PPP
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL--PGAGIPPPPPLPGAGIPPP-P 1056
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG-PPPPP 320
P G PPPP+ PG G PP PLP PPPP+PG G PP PP P G PPPPP
Sbjct: 1057 PLPGAGIPPPPPL--PGA--GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP 1112
Query: 321 GPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPPPAPHVNPAFFPPPTNSGMP 371
P PP P P + PPP LPG PPP G PPP P PPP +P
Sbjct: 1113 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP---LP 1169
Query: 372 TSDSRGPPPTDPYGRPPP 389
+ PPP G PPP
Sbjct: 1170 GAGIPPPPPLPGVGIPPP 1187
Score = 136 bits (343), Expect = 4e-32
Identities = 89/198 (44%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 208 PGAVPGGDRFPGPAGPGG---PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P +PG P P PG PPPP P PP PPL G P PP P G PPPL
Sbjct: 923 PPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL- 981
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG-PPPPP 320
P G PPPP+ PG G PP PLP PPPP+PG G PP PP P G PPPPP
Sbjct: 982 --PGAGIPPPPPL--PGA--GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1035
Query: 321 GPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPPPAPHVNPAFFPPPTNSGMP 371
P PP P P + PPP LPG PPP G PPP P PPP +P
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---LP 1092
Query: 372 TSDSRGPPPTDPYGRPPP 389
+ PPP G PPP
Sbjct: 1093 GAGIPPPPPLPGVGIPPP 1110
Score = 130 bits (326), Expect = 4e-30
Identities = 94/230 (40%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 174 TTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-AVPGGDRFPGPAGPGGPPPPFPA 232
T S M G G PP P G P A+P G PPPP P
Sbjct: 864 TESSSSMPGLGMVPPPPP------PLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPG 917
Query: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
PP PPL PG P PP PG +PPP PP G PPP PG PP PL
Sbjct: 918 AGIPPPPPL--PGAGILPLPPLPGAGIPPP---PPLPGAAIPPPPPLPGAGIPLPP--PL 970
Query: 293 PPG---PPPPVPGYGPPPGPPPPQQG-PPPPPGPFPPRPPGPLGPPLTLAPPPHLPG--- 345
P PPPP+PG G PP PP P G PPPPP P PP P P + PPP LPG
Sbjct: 971 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1030
Query: 346 PPP------GAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
PPP G PPP P PPP +P + PPP G PPP
Sbjct: 1031 PPPPPLPGAGIPPPPPLPGAGIPPPPP---LPGAGIPPPPPLPGAGIPPP 1077
Score = 128 bits (321), Expect = 2e-29
Identities = 91/207 (43%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 208 PGAVPGGDRFPGPAGPG---GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P +PG P P PG PPPP P PP PPL PG PP PP PG +PPP
Sbjct: 1088 PPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL--PGAGIPPPPPLPGAGIPPP-- 1143
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG-PPPPP 320
P R PPPP L PG G PP PLP PPPP+PG G PP PP P G PPPPP
Sbjct: 1144 PPLPRVGIPPPPPL-PGA--GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPP 1200
Query: 321 GP---FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP--APHVNPAFFPPPTNSGMPTSDS 375
P PP PP P G + AP P LP P G PPP P P P +S +PT
Sbjct: 1201 LPGAGIPPPPPLP-GMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQV 1259
Query: 376 RG----PPPTDPYGRPPPYDRGDYGPP 398
G P P+ +G D+G P
Sbjct: 1260 CGFLPPPLPSGLFGLGMNQDKGSRKQP 1286
Score = 105 bits (261), Expect = 1e-22
Identities = 77/203 (37%), Positives = 87/203 (42%), Gaps = 45/203 (22%)
Query: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPG--------------------QVLPPPLAGP 266
PPP P ++ P G PP PP PG ++LPPP
Sbjct: 858 PPPLPCTESSSSMP--GLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPL 915
Query: 267 PNRGDRPPPPV----LFPGQPF---GQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQG- 315
P G PPPP+ + P P G PP PLP PPPP+PG G P PP P G
Sbjct: 916 PGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGI 975
Query: 316 PPPPPGPFPPRPPGPLGPPLTLAPPPHLPG---PPP------GAPPPAPHVNPAFFPPPT 366
PPPPP P PP P P + PPP LPG PPP G PPP P PPP
Sbjct: 976 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1035
Query: 367 NSGMPTSDSRGPPPTDPYGRPPP 389
+P + PPP G PPP
Sbjct: 1036 ---LPGAGIPPPPPLPGAGIPPP 1055
Score = 94.7 bits (234), Expect = 2e-19
Identities = 79/234 (33%), Positives = 86/234 (36%), Gaps = 75/234 (32%)
Query: 228 PPFPAGQTPPRPPLGPPGPPGPPGPPPPGQV-----------------------LPPPL- 263
P Q PP P L G PG PP + PPPL
Sbjct: 803 PTQSISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLP 862
Query: 264 -----AGPPNRGDRPPPPVLFPGQPFGQPPLGPLP-----------PGPPPPVPGYGPPP 307
+ P G PPPP PG P +P P PPPP+PG G PP
Sbjct: 863 CTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPP 922
Query: 308 GPPPPQQG------------PPPPPGP---FPPRPP-----GPLGPPLT---LAPPPHLP 344
PP P G PPPPP P PP PP PL PPL + PPP LP
Sbjct: 923 PPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP 982
Query: 345 G---PPP------GAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
G PPP G PPP P PPP +P + PPP G PPP
Sbjct: 983 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---LPGAGIPPPPPLPGAGIPPP 1033
Score = 44.3 bits (103), Expect = 3e-04
Identities = 66/255 (25%), Positives = 82/255 (32%), Gaps = 41/255 (16%)
Query: 161 KQFLSQFEMQSRKTTQSGQMSG-EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFP- 218
+Q Q ++Q ++ Q Q+ G E A PP A PQ PGA G DRF
Sbjct: 207 QQQQQQLQLQLQQQQQQQQLQGAEEPAAPP----TAVSPQ--------PGAFLGLDRFLL 254
Query: 219 GPAGPGGPPPPFPAGQ--------------TPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
GP+G G P P + PR P PP P G P P P A
Sbjct: 255 GPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAA 314
Query: 265 GPPNRGDRPPPPVLFPG-QPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF 323
P P PG + G P G + P P ++ P
Sbjct: 315 KDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDA 374
Query: 324 PPR--------PPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTN--SGMPTS 373
P R GP P A P P P P P + P + T S S
Sbjct: 375 PQRLGEEPEEEAQGPDAP--AAASLPGSPAPSQRCFKPYPLITPCYIKTTTRQLSSPNHS 432
Query: 374 DSRGPPPTDPYGRPP 388
S+ P + R P
Sbjct: 433 PSQSPNQSPRIKRRP 447
Score = 29.3 bits (64), Expect = 9.8
Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 13/87 (14%)
Query: 316 PPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAP------------PPAPHVNPAF-F 362
P PP P+P LG L P G PG+P P + P
Sbjct: 232 PAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQ 291
Query: 363 PPPTNSGMPTSDSRGPPPTDPYGRPPP 389
PP+ G+P S++ P P + P
Sbjct: 292 QPPSPGGLPVSEAPSLPAAQPAAKDSP 318
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 135 bits (339), Expect = 1e-31
Identities = 96/250 (38%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP--PPFPAG---QTP 236
G+ + PP G ++ PQG G+ G P GD+ P P G P PP G Q P
Sbjct: 55 GKPQGPPPQGGNK---PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 111
Query: 237 PRPPLGPPGPPG-----PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP 291
P PP P GPP P GPPPPG+ PP G +R R PP G+P G PP G
Sbjct: 112 PPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPP-----GKPQGPPPQGG 166
Query: 292 LPPGPPPPVPG--YGPPPGPPPPQQGPPPPPGPFPPRPPG------------PLGPPLTL 337
P PPP PG GPPP QGPPPP P P P G P GPP
Sbjct: 167 NQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG 226
Query: 338 APPPHLPGPPPGAP--PPAPHVNPAFFPPPTN-------SGMPTSDSRGPPPTDPYGRPP 388
P P PPPG P PP N PPP G S S PP P G P
Sbjct: 227 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQ 286
Query: 389 PYDRGDYGPP 398
GPP
Sbjct: 287 QEGNNPQGPP 296
Score = 132 bits (332), Expect = 8e-31
Identities = 98/256 (38%), Positives = 106/256 (41%), Gaps = 53/256 (20%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG---PGGPPPPFPAGQTPP----RPP 240
PP G + PQG + R P + PG + P P G P GPPPP Q PP P
Sbjct: 72 PPPGKPQGPPPQGDKSRS--PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRP 129
Query: 241 LGPPGPPGPPGPPPPGQVL-----PP--PLAGPPNRGDRPPPPVLFPGQPFGQPPLG-PL 292
GPP P P GPPP G PP P PP G++P P PG+P G PP G
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189
Query: 293 PPGPPPPVPGYGPPP----------------GPPPP----QQGPPPPPG----------- 321
P GPPPP GPPP GPPP QGPPPPPG
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 249
Query: 322 -PFPPRPPG-PLGPPLTLAPPPHLPGPPPGAP--PPAPHVNPAFFPPPTNSGMPTSDSRG 377
P P PPG P GPP PPG P PP N PPP G P +
Sbjct: 250 KPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP-QQPQA 308
Query: 378 PPPTDPYGRPPPYDRG 393
PP P G P P G
Sbjct: 309 PPAGQPQGPPRPPQGG 324
Score = 127 bits (319), Expect = 3e-29
Identities = 91/229 (39%), Positives = 99/229 (43%), Gaps = 50/229 (21%)
Query: 208 PGAVPGGDRFPGPAG---PGGPPPPFPAGQTPPRPPLGPPGPPG--PPGPPPPGQVLPPP 262
P + G + P P G P GPPPP P P GPP G P GPPPPG+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPP-------PGKPQGPPPQGGNKPQGPPPPGKPQGPP 81
Query: 263 LAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPG--YGPPP-------GPPPP- 312
G +R R PP G+P G PP G P PPP PG GPPP GPPPP
Sbjct: 82 PQGDKSRSPRSPP-----GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPG 136
Query: 313 -QQGPPP--PPGPFPPRPPG-PLGPPLTLAPPPHLPGPPPG---APPPAPHVNPAFFPPP 365
QGPPP P PPG P GPP P P PPPG PPP P PPP
Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPP 196
Query: 366 -------------TNSGMPTSDSRGPPP---TDPYGRPPPYDRGDYGPP 398
+S P +GPPP P G PPP + PP
Sbjct: 197 GKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 245
Score = 120 bits (301), Expect = 3e-27
Identities = 87/229 (37%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP--PPFPAG---QTP 236
G+ + PP G +R PQG G+ G P GD+ P P G P PP G Q P
Sbjct: 116 GKPQGPPPQGGNR---PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 172
Query: 237 PRPPLGPPGPPG-----PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP 291
P PP P GPP P GPPPPG+ PP G +R + PP G+P G PP G
Sbjct: 173 PPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPP-----GKPQGPPPQGG 227
Query: 292 LPPGPPPPVPG--YGPPP-------GPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPH 342
P PPP PG GPPP GPPPP + P PP + PP PP
Sbjct: 228 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK-PQGPPAQGGSKSQSARSPPGKPQGPPQ 286
Query: 343 LPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP--PP 389
G P PPP PA P P +GPP GRP PP
Sbjct: 287 QEGNNPQGPPP-----PAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 330
Score = 65.5 bits (158), Expect = 1e-10
Identities = 54/144 (37%), Positives = 56/144 (38%), Gaps = 34/144 (23%)
Query: 276 PVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPG---PFPPRPPG-PL 331
P L G P G P G P PPP PPG P PPP G P P PPG P
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPP------PPGKP----QGPPPQGGNKPQGPPPPGKPQ 78
Query: 332 GPP-------LTLAPPPHLPGPP------PGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP 378
GPP +PP GPP P PPP P PPP P P
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--PPPQGGNRPQGP---P 133
Query: 379 PPTDPYGRPPPYD--RGDYGPPGR 400
PP P G PP D R PPG+
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGK 157
Score = 32.7 bits (73), Expect = 0.89
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 334 PLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP---TDPYGRPPPY 390
P +A P P P G P P PPP G P +GPPP P G PPP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGP-------PPPP--GKP----QGPPPQGGNKPQGPPPPG 75
Query: 391 DRGDYGPPGREMDTARTP 408
P G + + R+P
Sbjct: 76 KPQGPPPQGDKSRSPRSP 93
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 134 bits (336), Expect = 3e-31
Identities = 97/245 (39%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG---PGGPPPPFPAGQTPP----RPP 240
PP G + PQG + R P + PG + P P G P GPPPP Q PP P
Sbjct: 93 PPPGKPQGPPPQGDKSRS--PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 241 LGPPGPPGPPGPPPPGQVL------PP--PLAGPPNRGDRPPPPVLFPGQPFGQPPLGP- 291
GPP P P GPPP G PP P PP G++P P PG+P G PP G
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 210
Query: 292 LPPGPPPPVPGYGPPP----------GPPPPQQGPPP-----PPGPFPPRPPGPLGPPLT 336
P GPPPP GPPP PP QGPPP P GP PP P P GPP
Sbjct: 211 KPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQ 269
Query: 337 LAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP---TDPYGRPPPYDRG 393
P P PPPG P P P +S P +GPPP P G PPP +
Sbjct: 270 GGNKPQGP-PPPGKPQGPP---PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKP 325
Query: 394 DYGPP 398
PP
Sbjct: 326 QGPPP 330
Score = 131 bits (329), Expect = 2e-30
Identities = 103/276 (37%), Positives = 114/276 (41%), Gaps = 72/276 (26%)
Query: 191 GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG---PGGPPPPFPAGQTPP----RPPLGP 243
G+ + A PQGG + + P + PG + P P G P GPPPP Q PP P GP
Sbjct: 34 GNPQGAPPQGGN-KPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 92
Query: 244 PGPPGPPGPPPPGQVL-----PP--PLAGPPNRGDRPPPPVLFPGQPFGQPPLGP-LPPG 295
P P P GPPP G PP P PP G++P P PG+P G PP G P G
Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 152
Query: 296 PPPPVPGYGPPP-----------------GPPPP----QQGPPPPPG------------P 322
PPPP GPPP GPPP QGPPPPPG P
Sbjct: 153 PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 323 FPPRPPG-PLGPP--------LTLAPPPHLPGPPPGA------PPPAPHVNPAFFPPPTN 367
P PPG P GPP +PP GPPP PPP P PPP
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--PPPQG 270
Query: 368 SGMPTSDSRGPPPTDPYGRPP---PYDRGDYGPPGR 400
P PPP P G PP R PPG+
Sbjct: 271 GNKPQGP---PPPGKPQGPPPQGGSKSRSSRSPPGK 303
Score = 130 bits (326), Expect = 4e-30
Identities = 95/246 (38%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG---PGGPPPPFPAGQTPP- 237
G GPP P G + R + PG + P P G P GPPPP Q PP
Sbjct: 147 GNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Query: 238 ---RPPLGPPGPPGPPGPPPPGQ-----VLPPP--LAGPPNRGDR----PPPPVLFPGQP 283
P GPP P P GPPP G PP GPP +G PPPP PG+P
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPP---PGKP 263
Query: 284 FGQPPL-GPLPPGPPPPVPGYGPPP----------GPPPPQQGPPPPPGPFPPRPPGPLG 332
G PP G P GPPPP GPPP PP QGPPP G P PP P G
Sbjct: 264 QGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG 323
Query: 333 PPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDR 392
P PPP P G PPP P PP G S S PP P G P
Sbjct: 324 KP--QGPPPQGGNKPQGPPPPGKPQGP---PP---QGGSKSRSARSPPGKPQGPPQQEGN 375
Query: 393 GDYGPP 398
GPP
Sbjct: 376 NPQGPP 381
Score = 119 bits (297), Expect = 9e-27
Identities = 96/238 (40%), Positives = 106/238 (44%), Gaps = 51/238 (21%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG--PGGPPPPFPAG----QT 235
G+ + PP G ++ PQG G+ G P GD A PG P P P G Q
Sbjct: 199 GKPQGPPPQGGNK---PQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG 255
Query: 236 PPRPPLGPPGPPG-----PPGPPPPGQVL-PPPLAGPPNRGDRPPPPVLFPGQPFGQPPL 289
PP PP P GPP P GPPPPG+ PPP G +R R PP G+P G PP
Sbjct: 256 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP-----GKPQGPPPQ 310
Query: 290 GPLPPGPPPPVPG--YGPPP-------GPPPPQQGP--PPPPGPFPPR----PPG-PLGP 333
G P PPP PG GPPP GPPPP + P PPP G R PPG P GP
Sbjct: 311 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK-PQGPPPQGGSKSRSARSPPGKPQGP 369
Query: 334 PLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP--PP 389
P P P PP G P P PA G P +GPP GRP PP
Sbjct: 370 PQQEGNNPQGPPPPAGGNPQQPQAPPA--------GQP----QGPPRPPQGGRPSRPP 415
Score = 115 bits (289), Expect = 8e-26
Identities = 93/240 (38%), Positives = 99/240 (41%), Gaps = 60/240 (25%)
Query: 208 PGAVPGGDRFPGPAGPGGPP-PPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA-- 264
P + G + P G P PP P G+ PP G P GPP PPP PPP
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPP-PPPGKPQGPPPQGGN 87
Query: 265 ------------GPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPG--YGPPP--- 307
GPP +GD+ P PG+P G PP G P PPP PG GPPP
Sbjct: 88 KPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 147
Query: 308 ----GPPPP--QQGPPP-----------PPG-PFPPRPPG---PLGPPLTLAPPPHLP-G 345
GPPPP QGPPP PPG P P P G P GPP PPP P G
Sbjct: 148 NKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPP----PPPGKPQG 203
Query: 346 PPP-------GAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
PPP G PPP P PP G S S PP P G PP GPP
Sbjct: 204 PPPQGGNKPQGPPPPGKPQGP---PP---QGDNKSQSARSPPGKPQGPPPQGGNQPQGPP 257
Score = 101 bits (251), Expect = 2e-21
Identities = 72/180 (40%), Positives = 75/180 (41%), Gaps = 36/180 (20%)
Query: 228 PPFPAGQTPPRPPLG---PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
P AG PP G P GPP PPG P PPP G N+ PPPP PG+P
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQG----PPPQGG--NQPQGPPPP---PGKPQ 79
Query: 285 GQPPLGP-LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHL 343
G PP G P GPPPP G P GPPP P P P P GPP P
Sbjct: 80 GPPPQGGNKPQGPPPP----GKPQGPPPQGDKSRSPRSP----PGKPQGPPPQGGNQPQG 131
Query: 344 PGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYD---RGDYGPPGR 400
P PPPG P PPP P PPP P G PP D R PPG+
Sbjct: 132 PPPPPGKPQG---------PPPQGGNKPQGP---PPPGKPQGPPPQGDNKSRSSRSPPGK 179
Score = 48.1 bits (113), Expect = 2e-05
Identities = 38/109 (34%), Positives = 42/109 (38%), Gaps = 32/109 (29%)
Query: 304 GPPPGPPPPQQGPPPPPGPFPPRPPG-PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFF 362
G P G PP QG P GP P PPG P GPP P P PPPG P
Sbjct: 34 GNPQGAPP--QGGNKPQGP--PSPPGKPQGPPPQGGNQPQGPPPPPGKP----------- 78
Query: 363 PPPTNSGMPTSDSRGPPP---TDPYGRPPPYDRGDYGPPGREMDTARTP 408
+GPPP P G PPP P G + + R+P
Sbjct: 79 -------------QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 114
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 120 bits (302), Expect = 2e-27
Identities = 82/163 (50%), Positives = 89/163 (54%), Gaps = 20/163 (12%)
Query: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPG--PPGPPPPGQVLPPPLAG 265
P +VP + P PG PPP P PP PPL PPGPP PPGPPP PP L
Sbjct: 394 PQSVPPS-QIQAPPMPG-PPPLGP----PPAPPLRPPGPPTGLPPGPPPGA---PPFLRP 444
Query: 266 PPNRGDRPP-PPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFP 324
P G R P P +L PG P G+PP GP PGPPP +P GPPP PPP+ PP PPG P
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPP-GPP-PGPPPGLPP-GPPPRGPPPRLPPPAPPGIPP 501
Query: 325 PRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTN 367
PR PG + PPL P L PPG PPAP NP P N
Sbjct: 502 PR-PGMMRPPLV----PPLGPAPPGLFPPAPLPNPGVLSAPPN 539
Score = 110 bits (276), Expect = 3e-24
Identities = 69/152 (45%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP----PPVPGY- 303
PP PP Q+ PP+ GPP G P PP+ PG P G PP GP P PP P +PG
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPP-GPPPGAPPFLRPPGMPGLR 451
Query: 304 GP-----PPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGP-PPGAPPPAPHV 357
GP PPGPPP + P PPPGP P PPGP PP PPP LP P PPG PPP P +
Sbjct: 452 GPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGP--PPR--GPPPRLPPPAPPGIPPPRPGM 506
Query: 358 NPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
PP P P P PP
Sbjct: 507 MRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPP 538
Score = 98.6 bits (244), Expect = 1e-20
Identities = 74/188 (39%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 165 SQFEMQSRKT-TQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGP 223
S+ E QS+K + G A + + P PG P G P P
Sbjct: 364 SEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRP 423
Query: 224 GGPPPPFPAGQTPPRPP-LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ 282
GPP P G P PP L PPG PG GP P ++LPP GPP PPP PG
Sbjct: 424 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP--RLLPP---GPPPGRPPGPPPGPPPGL 478
Query: 283 PFGQPPLGP-------LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPL 335
P G PP GP PPG PPP PG PP PP P PPG F PP PL P
Sbjct: 479 PPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPL---GPAPPGLF---PPAPLPNPG 532
Query: 336 TLAPPPHL 343
L+ PP+L
Sbjct: 533 VLSAPPNL 540
Score = 62.8 bits (151), Expect = 8e-10
Identities = 43/92 (46%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 313 QQGPPP--PPGPF--PPRP-PGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTN 367
QQ PP PP PP P P PLGPP APP PGPP G PP P P F PP
Sbjct: 390 QQAPPQSVPPSQIQAPPMPGPPPLGPP--PAPPLRPPGPPTGLPPGPPPGAPPFLRPPGM 447
Query: 368 SGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
G+ R PP P GRPP G PPG
Sbjct: 448 PGLRGPLPRLLPPGPPPGRPPGPPPGP--PPG 477
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/97 (40%), Positives = 40/97 (41%), Gaps = 20/97 (20%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGP-PPPFPAGQTPPRP-----PL 241
PPG P GR G PG PG P P GP PPP P G PPRP PL
Sbjct: 459 PPG-------PPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPL 511
Query: 242 GPPGPPGPPGPPPPGQV-------LPPPLAGPPNRGD 271
PP P PPG PP + PP L P D
Sbjct: 512 VPPLGPAPPGLFPPAPLPNPGVLSAPPNLIQRPKADD 548
Score = 48.9 bits (115), Expect = 1e-05
Identities = 35/84 (41%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 327 PPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP-TDPYG 385
PP + P APP +PGPPP PPPAP + P G PT GPPP P+
Sbjct: 393 PPQSVPPSQIQAPP--MPGPPPLGPPPAPPLRPP--------GPPTGLPPGPPPGAPPFL 442
Query: 386 RPP--PYDRGDY-------GPPGR 400
RPP P RG PPGR
Sbjct: 443 RPPGMPGLRGPLPRLLPPGPPPGR 466
Score = 43.9 bits (102), Expect = 4e-04
Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 250 PGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 309
PG PP + GPP R P +L G P LPPG PP GPPPGP
Sbjct: 159 PGAQPPSILKKTSAYGPPTRAVSILP-LLGHGVP-------RLPPGRKPP----GPPPGP 206
Query: 310 PPPQ 313
PPPQ
Sbjct: 207 PPPQ 210
Score = 35.8 bits (81), Expect = 0.10
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 247 PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG----PLPPGPPPPVPG 302
P P P P +L + P + PP +L +G P PL P +P
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQ----PPSILKKTSAYGPPTRAVSILPLLGHGVPRLPP 195
Query: 303 YGPPPGPPPPQQGPPPP 319
PPGPPP GPPPP
Sbjct: 196 GRKPPGPPP---GPPPP 209
Score = 35.8 bits (81), Expect = 0.10
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 18/54 (33%)
Query: 291 PLPPGPPPPV----PGYGPP--------------PGPPPPQQGPPPPPGPFPPR 326
PLP PP + YGPP P PP ++ P PPPGP PP+
Sbjct: 157 PLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPGPPPGPPPPQ 210
Score = 33.5 bits (75), Expect = 0.52
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 16/78 (20%)
Query: 335 LTLAPPPHLPG-------PPPGAPPPAPHVNPAFFPPPTNS---------GMPTSDSRGP 378
+ L PH P P PGA PP+ + + PPT + G+P
Sbjct: 139 IPLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRK 198
Query: 379 PPTDPYGRPPPYDRGDYG 396
PP P G PPP YG
Sbjct: 199 PPGPPPGPPPPQVVQMYG 216
Score = 32.7 bits (73), Expect = 0.89
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 10/47 (21%)
Query: 233 GQTPPRPPLG--PPGPPGPPGPPPP------GQVLPPPLAGPPNRGD 271
G PR P G PPGPP PGPPPP G+ + L PP R D
Sbjct: 187 GHGVPRLPPGRKPPGPP--PGPPPPQVVQMYGRKVGFALDLPPRRRD 231
Score = 30.8 bits (68), Expect = 3.4
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 19/72 (26%)
Query: 223 PGGPPPPF---PAGQTPPR------PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP 273
PG PP + PP P LG P PPG PPG PPP GPP P
Sbjct: 159 PGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPG---PPP--GPP-----P 208
Query: 274 PPPVLFPGQPFG 285
P V G+ G
Sbjct: 209 PQVVQMYGRKVG 220
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 120 bits (301), Expect = 3e-27
Identities = 87/196 (44%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 211 VPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGP-PG------PP--PPGQVLPP 261
VP PG +G PPPP P T P PP PP PP P PG PP P G + P
Sbjct: 573 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISP 632
Query: 262 PLAGPPNRGDR--PPPPVLFPGQPFGQPPLGPLPPG----PPPPVPGYGPPPGPPPPQQG 315
P PP GD PPPP L G G P LP G PPPP+PG P PPPP G
Sbjct: 633 P---PPLSGDATIPPPPPLPEG--VGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPG 687
Query: 316 P---PPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV-NPAFFPPPTNSGMP 371
PPPP P P G G P PPP LPG PG PPP P P PPP GMP
Sbjct: 688 SAGIPPPPPPLP----GEAGMP---PPPPPLPG-GPGIPPPPPFPGGPGIPPPPPGMGMP 739
Query: 372 TSDSRGPPPTDPYGRP 387
PPP +G P
Sbjct: 740 ------PPPPFGFGVP 749
Score = 107 bits (266), Expect = 4e-23
Identities = 93/291 (31%), Positives = 117/291 (40%), Gaps = 31/291 (10%)
Query: 110 LEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEM 169
L+++ + ++ + K L G S+K K++L + +T + + E
Sbjct: 489 LQVEMKKMESDFEQKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELED 548
Query: 170 QSRKTTQSGQMSGEGKAGPPGGSSRAAFPQ-----GGRGRGRFPGAVPGGDRFPGPAGPG 224
+ + +S PP SRA P G G P PG P P P
Sbjct: 549 AKK---EMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP 605
Query: 225 GPPP-PFPAGQTPPRPPLGPPGPPGPPGPPPPGQ-VLPPPLAGPPNRGDRPPPPVLFPGQ 282
PPP P P G PP P G P PP G +PPP P G P P PG
Sbjct: 606 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPP--PPLPEGVGIPSPSSLPGG 663
Query: 283 PFGQPPLGPLP-----PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
PP PLP P PPPP+PG P PPPP G P P PP P GP +
Sbjct: 664 T-AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGP-----GI 717
Query: 338 APPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPP 388
PPP PG PG PPP P + PPP G+P + P P+G P
Sbjct: 718 PPPPPFPG-GPGIPPPPPGMGMP-PPPPFGFGVPAA------PVLPFGLTP 760
Score = 88.6 bits (218), Expect = 1e-17
Identities = 66/166 (39%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGG----PPPPFPAGQTP 236
G + PP S A P P +P G P P+ PGG PPPP P
Sbjct: 627 GTAISPPPPLSGDATIPP--------PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 678
Query: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP 296
P PP P PG G PPP PPPL P PPPP PG P G PP P P GP
Sbjct: 679 PPPP---PPLPGSAGIPPP----PPPL---PGEAGMPPPPPPLPGGP-GIPPPPPFPGGP 727
Query: 297 --PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
PPP PG G PP PP P P PF P P + L P
Sbjct: 728 GIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRRP 773
Score = 71.6 bits (174), Expect = 2e-12
Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPH 342
P P P+PP PP P P PP P PPP P PP PP PL + ++ PP
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS 623
Query: 343 LPGPPPGAPPPAPHVNPAFFPP----------PTNSGMPTSDSRGPPPTDPYGR----PP 388
LPG +PPP P A PP P+ S +P + PPP P PP
Sbjct: 624 LPGGTAISPPP-PLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPP 682
Query: 389 PYDRGDYGPP 398
P G G P
Sbjct: 683 PPLPGSAGIP 692
Score = 35.8 bits (81), Expect = 0.10
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 340 PPHLPG--PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRG--DY 395
PP +P P P A PP P + PPP G T+ PPP P PPP G
Sbjct: 564 PPSVPSRAPVPPA-PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCIS 619
Query: 396 GPPGREMDTARTP 408
PP TA +P
Sbjct: 620 SPPSLPGGTAISP 632
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 120 bits (301), Expect = 3e-27
Identities = 87/196 (44%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 211 VPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGP-PG------PP--PPGQVLPP 261
VP PG +G PPPP P T P PP PP PP P PG PP P G + P
Sbjct: 582 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISP 641
Query: 262 PLAGPPNRGDR--PPPPVLFPGQPFGQPPLGPLPPG----PPPPVPGYGPPPGPPPPQQG 315
P PP GD PPPP L G G P LP G PPPP+PG P PPPP G
Sbjct: 642 P---PPLSGDATIPPPPPLPEG--VGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPG 696
Query: 316 P---PPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV-NPAFFPPPTNSGMP 371
PPPP P P G G P PPP LPG PG PPP P P PPP GMP
Sbjct: 697 SAGIPPPPPPLP----GEAGMP---PPPPPLPG-GPGIPPPPPFPGGPGIPPPPPGMGMP 748
Query: 372 TSDSRGPPPTDPYGRP 387
PPP +G P
Sbjct: 749 ------PPPPFGFGVP 758
Score = 107 bits (266), Expect = 4e-23
Identities = 93/291 (31%), Positives = 117/291 (40%), Gaps = 31/291 (10%)
Query: 110 LEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEM 169
L+++ + ++ + K L G S+K K++L + +T + + E
Sbjct: 498 LQVEMKKMESDFEQKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELED 557
Query: 170 QSRKTTQSGQMSGEGKAGPPGGSSRAAFPQ-----GGRGRGRFPGAVPGGDRFPGPAGPG 224
+ + +S PP SRA P G G P PG P P P
Sbjct: 558 AKK---EMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP 614
Query: 225 GPPP-PFPAGQTPPRPPLGPPGPPGPPGPPPPGQ-VLPPPLAGPPNRGDRPPPPVLFPGQ 282
PPP P P G PP P G P PP G +PPP P G P P PG
Sbjct: 615 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPP--PPLPEGVGIPSPSSLPGG 672
Query: 283 PFGQPPLGPLP-----PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
PP PLP P PPPP+PG P PPPP G P P PP P GP +
Sbjct: 673 T-AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGP-----GI 726
Query: 338 APPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPP 388
PPP PG PG PPP P + PPP G+P + P P+G P
Sbjct: 727 PPPPPFPG-GPGIPPPPPGMGMP-PPPPFGFGVPAA------PVLPFGLTP 769
Score = 88.6 bits (218), Expect = 1e-17
Identities = 66/166 (39%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGG----PPPPFPAGQTP 236
G + PP S A P P +P G P P+ PGG PPPP P
Sbjct: 636 GTAISPPPPLSGDATIPP--------PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 687
Query: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP 296
P PP P PG G PPP PPPL P PPPP PG P G PP P P GP
Sbjct: 688 PPPP---PPLPGSAGIPPP----PPPL---PGEAGMPPPPPPLPGGP-GIPPPPPFPGGP 736
Query: 297 --PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
PPP PG G PP PP P P PF P P + L P
Sbjct: 737 GIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRRP 782
Score = 71.6 bits (174), Expect = 2e-12
Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPH 342
P P P+PP PP P P PP P PPP P PP PP PL + ++ PP
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS 632
Query: 343 LPGPPPGAPPPAPHVNPAFFPP----------PTNSGMPTSDSRGPPPTDPYGR----PP 388
LPG +PPP P A PP P+ S +P + PPP P PP
Sbjct: 633 LPGGTAISPPP-PLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPP 691
Query: 389 PYDRGDYGPP 398
P G G P
Sbjct: 692 PPLPGSAGIP 701
Score = 35.8 bits (81), Expect = 0.10
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 340 PPHLPG--PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRG--DY 395
PP +P P P A PP P + PPP G T+ PPP P PPP G
Sbjct: 573 PPSVPSRAPVPPA-PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCIS 628
Query: 396 GPPGREMDTARTP 408
PP TA +P
Sbjct: 629 SPPSLPGGTAISP 641
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 119 bits (297), Expect = 9e-27
Identities = 93/233 (39%), Positives = 99/233 (42%), Gaps = 43/233 (18%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPG---GPPPP--FPAGQTPPR---- 238
PP G PQGG + + P PG P P G GPPP P GQ P
Sbjct: 52 PPPGKPEGRPPQGGN-QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQS 110
Query: 239 --PPLGPPGPPGPP--------GPPP-PGQVL-PPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
PP P P GPP GPPP PG+ PPP G N+ PPP PG+P G
Sbjct: 111 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG--NQSQGPPPR---PGKPEGP 165
Query: 287 PPLGPLPPGPPPPVPG--YGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP 344
PP G PPP PG GPPP QGPPP PG P P P G + PPP P
Sbjct: 166 PPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPG--KPEGPPPQGGNQSQGPPPR-P 222
Query: 345 GPPPGAPP--------PAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
G P G P P PH PPP P R PPP P G PPP
Sbjct: 223 GKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKP---QRPPPPGRPQGPPPP 272
Score = 118 bits (295), Expect = 2e-26
Identities = 96/239 (40%), Positives = 106/239 (44%), Gaps = 51/239 (21%)
Query: 187 GPP---GGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP--PPFPAGQTPPRPPL 241
GPP G S+ P+ G+ G+ P GG++ GP G P PP G PP
Sbjct: 80 GPPPQGGNQSQGPPPRPGKPEGQPP---QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP 136
Query: 242 GPPGPPGPP--------GPPP-PGQVL-PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP 291
P P GPP GPPP PG+ PPP G N+ PPP PG+P G PP G
Sbjct: 137 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG--NQSQGPPP---HPGKPEGPPPQGG 191
Query: 292 LPPGPPPPVPG--YGPPP-------GPP--------PPQQGPPPPPGPFPPRPPGPLGPP 334
PPP PG GPPP GPP PP QG P GP PP P P GPP
Sbjct: 192 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP-PPHPGKPQGPP 250
Query: 335 LTLAPPPHLPGPPPGAP--PPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP--PP 389
P P PPPG P PP P NP PP P +GPPP GRP PP
Sbjct: 251 PQEGNKPQRP-PPPGRPQGPPPPGGNPQQPLPP-----PAGKPQGPPPPPQGGRPHRPP 303
Score = 115 bits (287), Expect = 1e-25
Identities = 82/219 (37%), Positives = 93/219 (42%), Gaps = 27/219 (12%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPL 241
G+ + PP G +++ P G+ P G P PG P P P G + P
Sbjct: 97 GKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP- 155
Query: 242 GPPGPPGPPGPPPPG---QVLPPPLAG-----PPNRGDRPPPPVLFPGQPFGQPPLG--- 290
PP P P GPPP G PPP G PP G++ P PG+P G PP G
Sbjct: 156 -PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 214
Query: 291 ----PLPPGPP--PPVPGYGPPPGPPP---PQQGPPPPPGPFPPRPPGPLGPPLTLAPPP 341
P PG P PP G P GPPP QGPPP G P RPP P P PPP
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQ---GPPP 271
Query: 342 HLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
PG P P P P P PPP G P +G PP
Sbjct: 272 --PGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 113 bits (283), Expect = 4e-25
Identities = 87/235 (37%), Positives = 98/235 (41%), Gaps = 48/235 (20%)
Query: 212 PGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG-------PPGPPGPPGPPPPG---QVLPP 261
P G R G P PPP G+ RPP G PP P P GPPP G PP
Sbjct: 36 PEGRRPQGGNQPQRTPPP--PGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 93
Query: 262 PLAG-----PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPG--YGPPPGPPPPQQ 314
P G PP G++ P PG+P G PP G PPP PG GPPP Q
Sbjct: 94 PRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 153
Query: 315 GPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP--------PAPHVNPAFFPPPT 366
GPPP PG P P P G + PPPH PG P G PP P P PPP
Sbjct: 154 GPPPRPG--KPEGPPPQGGNQSQGPPPH-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 210
Query: 367 NSGMPTSDSRGPPP-------------TDPYGRPPPYDRGDYGPPGREMDTARTP 408
+ S+GPPP P G PPP+ GPP +E + + P
Sbjct: 211 GG----NQSQGPPPRPGKPEGPPSQGGNKPQG-PPPHPGKPQGPPPQEGNKPQRP 260
Score = 109 bits (273), Expect = 6e-24
Identities = 85/233 (36%), Positives = 98/233 (42%), Gaps = 25/233 (10%)
Query: 183 EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPPPFPAGQTPPRPPL 241
EG+ G + P G+ GR P GG++ GP PG P P P G + P
Sbjct: 37 EGRRPQGGNQPQRTPPPPGKPEGRPP---QGGNQSQGPPPRPGKPEGPPPQGGNQSQGP- 92
Query: 242 GPPGPPGPPGPPPPG---QVLPPPLAG-----PPNRGDRPPPPVLFPGQPFGQPPLGPLP 293
PP P P G PP G PPP G PP G++ P PG+P G PP G
Sbjct: 93 -PPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 294 PGPPPPVPGY--GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAP 351
PPP PG GPPP QGPPP PG P P P G + PPP PG P G P
Sbjct: 152 SQGPPPRPGKPEGPPPQGGNQSQGPPPHPGK--PEGPPPQGGNQSQGPPPR-PGKPEGPP 208
Query: 352 PPAPHVNPAFFPPPTNSGMPTSDS----RGPPPTD--PYGRPPPYDRGDYGPP 398
P + + P P P S +GPPP P G PP PP
Sbjct: 209 PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPP 261
Score = 105 bits (261), Expect = 1e-22
Identities = 77/200 (38%), Positives = 85/200 (42%), Gaps = 34/200 (17%)
Query: 228 PPFPAGQTPPRPPLG-------PPGPPGPPGPPPPG---QVLPPPLAG-----PPNRGDR 272
P +G+ R P G PP P P G PP G PPP G PP G++
Sbjct: 29 PSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 88
Query: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPG--YGPPPGPPPPQQGPPPPPGPFPPRPPGP 330
P PG+P GQPP G PPP PG GPPP QGPPP PG P P P
Sbjct: 89 SQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG--KPEGPPP 146
Query: 331 LGPPLTLAPPPHLPGPPPGAPP--------PAPHVNPAFFPPPTNSGMPTSDSRGPPPT- 381
G + PPP PG P G PP P PH PPP + S+GPPP
Sbjct: 147 QGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGG----NQSQGPPPRP 201
Query: 382 -DPYGRPPPYDRGDYGPPGR 400
P G PP GPP R
Sbjct: 202 GKPEGPPPQGGNQSQGPPPR 221
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 112 bits (279), Expect = 1e-24
Identities = 80/195 (41%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 208 PGAVPGGDRFPGPAG---PGGPPPPFPAGQTPPRPPLGPPGPPG--PPGPPPPGQVLPPP 262
P + G + P P G P GPPPP P P GPP G P GPPPPG+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPP-------PGKPQGPPPQGGNKPQGPPPPGKPQGPP 81
Query: 263 LAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP--QQGPPPPP 320
G +R R PP G+P G PP G P GPPP G P GPPPP QGPP
Sbjct: 82 PQGDKSRSPRSPP-----GKPQGPPPQGGKPQGPPP--QGGNKPQGPPPPGKPQGPPAQG 134
Query: 321 G---PFPPRPPG-PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSR 376
G PPG P GPP P P PP G P P PA G P +
Sbjct: 135 GSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA--------GQP----Q 182
Query: 377 GPPPTDPYGRP--PP 389
GPP GRP PP
Sbjct: 183 GPPRPPQGGRPSRPP 197
Score = 89.0 bits (219), Expect = 1e-17
Identities = 64/153 (41%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPP-PFPAGQTPPRPP 240
G+ + PP G ++ PQG G+ G P GD+ P P G P P P G P PP
Sbjct: 55 GKPQGPPPQGGNK---PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPP 111
Query: 241 LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPL-GPLPPGPPPP 299
P G P GPPPPG+ PP G PP G+P G P G P GPPPP
Sbjct: 112 --PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP----GKPQGPPQQEGNNPQGPPPP 165
Query: 300 VPGYGP--PPGPPPPQ-QGPP-PPPGPFPPRPP 328
G P P PP Q QGPP PP G P RPP
Sbjct: 166 A-GGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 80.5 bits (197), Expect = 4e-15
Identities = 58/154 (37%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP-LPPGPPPPVPGYGPPP 307
P GP P G N+ PPPP PG+P G PP G P GPPPP G P
Sbjct: 36 PQGPSPQGG----------NKPQGPPPP---PGKPQGPPPQGGNKPQGPPPP----GKPQ 78
Query: 308 GPPPP---QQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
GPPP + P PPG P PP G P PPP P G PPP P
Sbjct: 79 GPPPQGDKSRSPRSPPGK-PQGPPPQGGKPQ--GPPPQGGNKPQGPPPPGKPQGP----- 130
Query: 365 PTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
P G + +R PP P G P GPP
Sbjct: 131 PAQGGSKSQSARSPPGK-PQGPPQQEGNNPQGPP 163
Score = 57.0 bits (136), Expect = 4e-08
Identities = 48/122 (39%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 304 GPPPGPPPP----QQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP------ 353
G P GP P QGPPPPPG P+ P P G PPP PG P PPP
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGK--PQGPPPQGGNKPQGPPP--PGKPQ-GPPPQGDKSR 88
Query: 354 APHVNPAF-FPPPTNSGMPTSDSRGPPP---TDPYGRPPPYDRGDYGPP---GREMDTAR 406
+P P PP G P +GPPP P G PPP GPP G + +AR
Sbjct: 89 SPRSPPGKPQGPPPQGGKP----QGPPPQGGNKPQGPPPP--GKPQGPPAQGGSKSQSAR 142
Query: 407 TP 408
+P
Sbjct: 143 SP 144
Score = 42.7 bits (99), Expect = 9e-04
Identities = 38/115 (33%), Positives = 45/115 (39%), Gaps = 30/115 (26%)
Query: 170 QSRKTTQSGQMSGEGKAGPP-GGSSRAAFPQGG-RGRGRFPGAVPGGDRFPG-------- 219
Q K+ G+ + PP GG + PQGG + +G P P G G
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSAR 142
Query: 220 --PAGPGGPP---------PPFPAGQTPPRP-------PLGPPGPP--GPPGPPP 254
P P GPP PP PAG P +P P GPP PP G P PP
Sbjct: 143 SPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 32.7 bits (73), Expect = 0.89
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 334 PLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP---TDPYGRPPPY 390
P +A P P P G P P PPP G P +GPPP P G PPP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGP-------PPPP--GKP----QGPPPQGGNKPQGPPPPG 75
Query: 391 DRGDYGPPGREMDTARTP 408
P G + + R+P
Sbjct: 76 KPQGPPPQGDKSRSPRSP 93
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 110 bits (274), Expect = 4e-24
Identities = 86/234 (36%), Positives = 98/234 (41%), Gaps = 34/234 (14%)
Query: 185 KAGPPGGSSRAAFPQGGRGRG-----RFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
+ G GG R GG GRG R P G ++ GP GPG GQ+ P+P
Sbjct: 9 RGGGGGGFHRRG---GGGGRGGLHDFRSPPPGMGLNQNRGPMGPG-------PGQSGPKP 58
Query: 240 PLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPP 299
P+ PP P PPP Q PPP PP++ PPP P Q QPP P P P
Sbjct: 59 PIPPPPPHQQQQQPPPQQ--PPPQQPPPHQ----PPPHPQPHQQ-QQPP--PPPQDSSKP 109
Query: 300 VPGYGPPPGP-----PPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354
V GP P P PP PP P PPG GP T PPP + PPGAPPP
Sbjct: 110 VVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPPPAVTSAPPGAPPPT 168
Query: 355 PHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTP 408
P + PP G P + P P G P G GP G +M P
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGP----GPGPKQGPGPGGPKGGKMPGGPKP 218
Score = 105 bits (261), Expect = 1e-22
Identities = 86/258 (33%), Positives = 91/258 (35%), Gaps = 53/258 (20%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPP 237
G G G GG P G G + G + G GP P PPPP Q PP
Sbjct: 14 GGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPP 73
Query: 238 R---PPLGPPGPPGPPGPPPPGQVLPPP----------LAGP---PNRGDRPP------- 274
PP PP PP P P Q PPP GP P G PP
Sbjct: 74 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPP 133
Query: 275 --------PPVLFPGQ-PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP----- 320
PP PG P P + PPG PPP P P PP GPPPPP
Sbjct: 134 ATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPG 193
Query: 321 -GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP-------- 371
GP P + PGP GP P PG PG P H PP G P
Sbjct: 194 PGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPK----PPHRGGGEPRGGRQHHP 249
Query: 372 ---TSDSRGPPPTDPYGR 386
+GPPP P GR
Sbjct: 250 PYHQQHHQGPPPGGPGGR 267
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 108 bits (271), Expect = 1e-23
Identities = 92/265 (34%), Positives = 104/265 (39%), Gaps = 65/265 (24%)
Query: 190 GGSSRAAFPQGGRGRGRFPGAVPGGD-RFPGPAGPG---GPPPPFPAGQTPPRPPLGPPG 245
GGS P GGR P + P G RFP P+ PG GPP P PPRP +G
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS-PGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 246 ---PPGPPGPPPPGQVLP-----PPLAGPPNRGDRPPPPVLFPGQ--------------- 282
PP P P P Q P PP+ G P + P P FPG
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Query: 283 ----PFG-QPPLGPLPPG-----PPPPVPGYGPPPG-------PPPPQQGPPPPPGPFPP 325
PF +PPL P P PPPP P G P PPPPQ PP P P
Sbjct: 241 SSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRP 300
Query: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPP----------PAPHVNPAFFPPPTNSGMPTSDS 375
PP PPP PGPPP P P +++ + PP +P+
Sbjct: 301 SASSQAPPP---PPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPP----LPSPGR 353
Query: 376 RGPPPTDPYGRPPPYDRGDYGPPGR 400
GP P P RPPP R PPGR
Sbjct: 354 SGPLPPPPSERPPPPVR---DPPGR 375
Score = 99.0 bits (245), Expect = 1e-20
Identities = 93/303 (30%), Positives = 110/303 (36%), Gaps = 66/303 (21%)
Query: 144 LPKRELHGQNPVVTPCNK-QFLSQFEMQSRKTTQSGQMSGEGKAGPPGG-SSRAAFPQGG 201
L K E G+N +++ +K + L + R + G G G GG F GG
Sbjct: 25 LNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGGFGGGG 84
Query: 202 RGRGRFPGAVPGGDRFPGPAG------------------PGGPPPPF--PAGQTPPRPPL 241
G G G GG PG G GG PP P G++ P
Sbjct: 85 GGGG---GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPF 141
Query: 242 GPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP----- 296
PP PG P PG PP P R PPP +P PP P P P
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPP---EPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198
Query: 297 ----PPPVPG--YGPPPGPPPP---------------QQGPPPPPGPFPPRPPGPLGPPL 335
PPVPG P PGP PP +Q P PF RPP P P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 336 TLAPPPHLPGPPPG---------APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGR 386
L P P PP G PPP P N PP ++ P++ S+ PPP P R
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK---PPVPSTPRPSASSQAPPPPPPPSR 315
Query: 387 PPP 389
P P
Sbjct: 316 PGP 318
Score = 78.2 bits (191), Expect = 2e-14
Identities = 72/213 (33%), Positives = 80/213 (37%), Gaps = 55/213 (25%)
Query: 204 RGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQV----- 258
R P P ++ P P+ P P + Q PP PP PP PGPP PP
Sbjct: 279 REAVPPPPPQNNKPPVPS----TPRPSASSQAPPPPP--PPSRPGPPPLPPSSSGNDETP 332
Query: 259 -LP----------PPLAGPPNRGDRPPPPVLFPGQPFGQPP--LGPLPPGPPPPVPGYGP 305
LP PPL P G PPPP P P PP GPLP PPPPV G
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLP--PPPPVSRNGS 390
Query: 306 -----PPGPPPPQQG--PPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVN 358
P P P + P GP PP PP P APPP PPP+ +
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLPP---DRPSAGAPPP---------PPPSTSIR 438
Query: 359 PAFFPPPTNSGM-------PTSDSRGPPPTDPY 384
F P P SD PP +PY
Sbjct: 439 NGFQDSPCEDEWESRFYFHPISDL---PPPEPY 468
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 108 bits (271), Expect = 1e-23
Identities = 92/265 (34%), Positives = 104/265 (39%), Gaps = 65/265 (24%)
Query: 190 GGSSRAAFPQGGRGRGRFPGAVPGGD-RFPGPAGPG---GPPPPFPAGQTPPRPPLGPPG 245
GGS P GGR P + P G RFP P+ PG GPP P PPRP +G
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS-PGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 246 ---PPGPPGPPPPGQVLP-----PPLAGPPNRGDRPPPPVLFPGQ--------------- 282
PP P P P Q P PP+ G P + P P FPG
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Query: 283 ----PFG-QPPLGPLPPG-----PPPPVPGYGPPPG-------PPPPQQGPPPPPGPFPP 325
PF +PPL P P PPPP P G P PPPPQ PP P P
Sbjct: 241 SSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRP 300
Query: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPP----------PAPHVNPAFFPPPTNSGMPTSDS 375
PP PPP PGPPP P P +++ + PP +P+
Sbjct: 301 SASSQAPPP---PPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPP----LPSPGR 353
Query: 376 RGPPPTDPYGRPPPYDRGDYGPPGR 400
GP P P RPPP R PPGR
Sbjct: 354 SGPLPPPPSERPPPPVR---DPPGR 375
Score = 99.0 bits (245), Expect = 1e-20
Identities = 93/303 (30%), Positives = 110/303 (36%), Gaps = 66/303 (21%)
Query: 144 LPKRELHGQNPVVTPCNK-QFLSQFEMQSRKTTQSGQMSGEGKAGPPGG-SSRAAFPQGG 201
L K E G+N +++ +K + L + R + G G G GG F GG
Sbjct: 25 LNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGGFGGGG 84
Query: 202 RGRGRFPGAVPGGDRFPGPAG------------------PGGPPPPF--PAGQTPPRPPL 241
G G G GG PG G GG PP P G++ P
Sbjct: 85 GGGG---GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPF 141
Query: 242 GPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP----- 296
PP PG P PG PP P R PPP +P PP P P P
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPP---EPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198
Query: 297 ----PPPVPG--YGPPPGPPPP---------------QQGPPPPPGPFPPRPPGPLGPPL 335
PPVPG P PGP PP +Q P PF RPP P P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 336 TLAPPPHLPGPPPG---------APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGR 386
L P P PP G PPP P N PP ++ P++ S+ PPP P R
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK---PPVPSTPRPSASSQAPPPPPPPSR 315
Query: 387 PPP 389
P P
Sbjct: 316 PGP 318
Score = 78.2 bits (191), Expect = 2e-14
Identities = 72/213 (33%), Positives = 80/213 (37%), Gaps = 55/213 (25%)
Query: 204 RGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQV----- 258
R P P ++ P P+ P P + Q PP PP PP PGPP PP
Sbjct: 279 REAVPPPPPQNNKPPVPS----TPRPSASSQAPPPPP--PPSRPGPPPLPPSSSGNDETP 332
Query: 259 -LP----------PPLAGPPNRGDRPPPPVLFPGQPFGQPP--LGPLPPGPPPPVPGYGP 305
LP PPL P G PPPP P P PP GPLP PPPPV G
Sbjct: 333 RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLP--PPPPVSRNGS 390
Query: 306 -----PPGPPPPQQG--PPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVN 358
P P P + P GP PP PP P APPP PPP+ +
Sbjct: 391 TSRALPATPQLPSRSGVDSPRSGPRPPLPP---DRPSAGAPPP---------PPPSTSIR 438
Query: 359 PAFFPPPTNSGM-------PTSDSRGPPPTDPY 384
F P P SD PP +PY
Sbjct: 439 NGFQDSPCEDEWESRFYFHPISDL---PPPEPY 468
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 108 bits (271), Expect = 1e-23
Identities = 95/264 (35%), Positives = 103/264 (39%), Gaps = 55/264 (20%)
Query: 161 KQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGP 220
KQF QF + K PP S A P G + R P + G P P
Sbjct: 204 KQFFLQFHFKMEK--------------PPAPPSLPAGPPGVK---RPPPPLMNGLP-PRP 245
Query: 221 AGPGGPPPPFPAG-QTPPRPPLGPPGPPGPPGPP----------PPGQVLPPPLAG--PP 267
P PPP P G PP PP GP P GPPGPP PP V+ PP +G PP
Sbjct: 246 PLPESLPPPPPGGLPLPPMPPTGP-APSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPP 304
Query: 268 NRGDRPPPPVLFPGQPFGQPPLG---PLPPGPPPPVPGYGPP-PGPPPPQQGP-PPPPGP 322
G PP P + P P PP P PG PP PG PP PG PP G PP PG
Sbjct: 305 APGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGV 364
Query: 323 FPPRPPG--PLGPPLTLAPP---PHLPGPPPGAP------------PPAPHVN-PAFFPP 364
PP G P P + A P P PG P AP PP H + P P
Sbjct: 365 HPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQ 424
Query: 365 PTNSGMPTSDSRGPPPTDPYGRPP 388
P P P P RPP
Sbjct: 425 PPGVHPSNPGVHPPTPMPPMLRPP 448
Score = 81.3 bits (199), Expect = 2e-15
Identities = 55/135 (40%), Positives = 60/135 (44%), Gaps = 31/135 (22%)
Query: 271 DRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQGPPPPPG-----P 322
++PP P P P G PPG PPPP+ G PP PP P+ PPPPPG P
Sbjct: 215 EKPPAP---PSLPAG-------PPGVKRPPPPLMN-GLPPRPPLPESLPPPPPGGLPLPP 263
Query: 323 FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP---AFFPPPTNSGMPTSDSRGP- 378
PP P P GPP PP LP P PG PPAP V+P PP P P
Sbjct: 264 MPPTGPAPSGPP----GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPA 319
Query: 379 ----PPTDPYGRPPP 389
PPT P P
Sbjct: 320 PGVHPPTSGVHPPAP 334
Score = 80.9 bits (198), Expect = 3e-15
Identities = 65/164 (39%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 208 PGAVPGGDRFPGPAGPGGPP-----PPFPAGQTPPRPPLGPPGP---PGPPG--PPPPGQ 257
PG P PA PP PP P G PP P + PP P P PG PP PG
Sbjct: 306 PGVHPPAPGVHPPAPGVHPPTSGVHPPAP-GVHPPAPGVHPPAPGVHPPAPGVHPPAPG- 363
Query: 258 VLPPPLAG--PPNRGDRPPPPVLFPGQPFGQPP----------LGPLPPGPPPPVPGYGP 305
V PPP AG P G P P + P P PP + P PPG P PG P
Sbjct: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
Query: 306 -PPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
PPG P G PP P PP L PPL P ++P PPP
Sbjct: 424 QPPGVHPSNPGVHPPT-PMPPM----LRPPLPSEGPGNIPPPPP 462
Score = 77.0 bits (188), Expect = 4e-14
Identities = 64/171 (37%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 246 PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGP 305
PP PP P AGPP RPPPP++ G PP PLP PPP PG P
Sbjct: 217 PPAPPSLP----------AGPPGV-KRPPPPLMN-----GLPPRPPLPESLPPPPPGGLP 260
Query: 306 PPGPPPPQQGPPPPPGP-----FPPRPPGPLGPPLTLAPPPHLPGPP-PGAPPPAPHVNP 359
P PP P P GP PP PG P + PP PP PG PPAP V+P
Sbjct: 261 LPPMPPTG---PAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHP 317
Query: 360 AF--FPPPTNSGMPTSDSRGPP-----PTDPYGRPP-----PYDRGDYGPP 398
PPT+ P + PP P P PP P G + PP
Sbjct: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPP 368
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/77 (37%), Positives = 30/77 (38%), Gaps = 18/77 (23%)
Query: 324 PPRPPG-PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTD 382
PP PP P GPP PPP L P PP P PPP G+P PPT
Sbjct: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL-----PESLPPPPPGGLPLPPM---PPTG 268
Query: 383 PYGRPPPYDRGDYGPPG 399
P GPPG
Sbjct: 269 P---------APSGPPG 276
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 108 bits (270), Expect = 1e-23
Identities = 86/228 (37%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 191 GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPG---GPPPPFPAGQTPPRPPLG----- 242
G PQGG R P PG + P P G GPPPP G+ RPP G
Sbjct: 34 GKPEGRRPQGGNQPQR-PPPPPGKPQGPPPQGGNQSQGPPPP--PGKPEGRPPQGGNQSQ 90
Query: 243 -PPGPPGPPGPPPP-----GQVLPPPLAGPP-------NRGDRPPPPVLFPGQPFGQPPL 289
PP PG P PPP Q PPP P N+ RPPPP PG+P PP
Sbjct: 91 GPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPP---PGKPERPPPQ 147
Query: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 349
G PPP PG P PPPQ+G PP P GPP P P PPPG
Sbjct: 148 GGNQSQGPPPHPG---KPEGPPPQEGNKSRSARSPPGK--PQGPPQQEGNKPQGP-PPPG 201
Query: 350 APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGP 397
P P PA P P +GPPP GRPP +G P
Sbjct: 202 KPQGPP---PAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPP 246
Score = 99.8 bits (247), Expect = 6e-21
Identities = 74/185 (40%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 232 AGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP 291
+G+ R P G P PP PPPG+ PP G N+ PPPP PG+P G+PP G
Sbjct: 33 SGKPEGRRPQGGNQPQRPP--PPPGKPQGPPPQG-GNQSQGPPPP---PGKPEGRPPQGG 86
Query: 292 LPPGPPPPVP---------------GYGPPPGPP--PPQQG------PPPPPGPFPPRPP 328
PPP P G PPPG P PP QG PPPPPG P RPP
Sbjct: 87 NQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGK-PERPP 145
Query: 329 GPLGPPLTLAPPPHLPGPPPGAPPPAPHVN-PAFFPPPTNSGMPTSDSR----GPPPTDP 383
P G + PPPH PG P G PP + + A PP G P + PPP P
Sbjct: 146 -PQGGNQSQGPPPH-PGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKP 203
Query: 384 YGRPP 388
G PP
Sbjct: 204 QGPPP 208
Score = 93.2 bits (230), Expect = 6e-19
Identities = 73/188 (38%), Positives = 80/188 (42%), Gaps = 36/188 (19%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG----PGGPPPPFPAGQTPP------ 237
PP G PQGG + + P PG P P G G PPPP + PP
Sbjct: 73 PPPGKPEGRPPQGGN-QSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQS 131
Query: 238 -RPPLGPPGPPGPP--------GPPP-PGQVL-PPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
RPP P P PP GPPP PG+ PPP G +R R P PG+P G
Sbjct: 132 HRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSP-----PGKPQGP 186
Query: 287 PPL-GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPG 345
P G P GPPPP GPPP PQQ PP G +P GP PP P P
Sbjct: 187 PQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAG----KPQGPPPPPQGGRP----PR 238
Query: 346 PPPGAPPP 353
P G PP
Sbjct: 239 PAQGQQPP 246
Score = 89.0 bits (219), Expect = 1e-17
Identities = 71/188 (37%), Positives = 82/188 (43%), Gaps = 53/188 (28%)
Query: 231 PAGQTPP--RPPLGPPGPPGPP-GPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQP 287
P G+ P P PP PPG P GPPP G N+ PPPP PG+P G+P
Sbjct: 36 PEGRRPQGGNQPQRPPPPPGKPQGPPPQGG----------NQSQGPPPP---PGKPEGRP 82
Query: 288 PLGPLPPGPPPPVPGYGPPPGPPPPQ-----QGPPPPPGPFPPRPPGPLGPPLTLAPPPH 342
P G PPP PG P PPPQ QG PPPPG P RPP P G H
Sbjct: 83 PQGGNQSQGPPPHPG---KPERPPPQGGNQSQGTPPPPGK-PERPP-PQG-----GNQSH 132
Query: 343 LPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREM 402
P PPPG P PPP + S+GPPP + GPP +E
Sbjct: 133 RPPPPPGKPER---------PPPQGG----NQSQGPPP---------HPGKPEGPPPQEG 170
Query: 403 DTARTPLS 410
+ +R+ S
Sbjct: 171 NKSRSARS 178
Score = 80.1 bits (196), Expect = 5e-15
Identities = 52/129 (40%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 278 LFPGQPFGQPPLGPLPPGPPPPVPG--YGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPL 335
L G+P G+ P G P PPP PG GPPP QGPPPPPG RP P G
Sbjct: 31 LISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRP--PQGGNQ 88
Query: 336 TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP-----TSDSRGPPPTDPYGRPPPY 390
+ PPPH PG P PP + + PPP P R PPP RPPP
Sbjct: 89 SQGPPPH-PGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQ 147
Query: 391 -DRGDYGPP 398
GPP
Sbjct: 148 GGNQSQGPP 156
Score = 52.0 bits (123), Expect = 1e-06
Identities = 51/156 (32%), Positives = 56/156 (35%), Gaps = 42/156 (26%)
Query: 172 RKTTQSGQMSGEGKAGPPGGSSRAAFPQGG---RGRGRFPGAVPG-----GDRFPGPAGP 223
R Q G S + PP G PQGG +G PG G G++ P
Sbjct: 122 RPPPQGGNQSH--RPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSP 179
Query: 224 GGPP--PPFPAGQTPPRPPLGPPG-PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280
G P PP G P PP PPG P G PPP G P + PP
Sbjct: 180 PGKPQGPPQQEGNKPQGPP--PPGKPQG-----------PPPAGGNPQQPQAPP------ 220
Query: 281 GQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGP 316
P GPPPP G G PP P QQ P
Sbjct: 221 ---------AGKPQGPPPPPQG-GRPPRPAQGQQPP 246
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 179 QMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGD-RFPGPAGPGGPPPPFPAGQTPP 237
Q G GPP P G G + P A P G + P P GG PP GQ PP
Sbjct: 188 QQEGNKPQGPPPPGKPQGPPPAG-GNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPP 246
Query: 238 R 238
+
Sbjct: 247 Q 247
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 107 bits (266), Expect = 4e-23
Identities = 104/287 (36%), Positives = 117/287 (40%), Gaps = 72/287 (25%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP---PPFPAGQ 234
GQ G GP G F +G RG P PG PG GP GPP PP P G+
Sbjct: 579 GQDGLPGLPGPKGEPGGITF-KGERG----PPGNPGLPGLPGNIGPMGPPGFGPPGPVGE 633
Query: 235 TPPRPPLGPPGPPGPPGPP-PPGQVLPPP----LAGPPNR-GDRPPPPVLFPGQPF--GQ 286
+ G PG PG PGP PGQ + P L G P R GD V PG P GQ
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD-----VGLPGDPGLPGQ 688
Query: 287 PPLGPLP-------------PGPPPP--VPGYGPPPGPPPPQ-----QGPPPPPG----- 321
P L +P PGPP P PG PPG P +GPP PPG
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPK 748
Query: 322 -------PFPPRPPGPLGPPLTLAPP-----PHLPGPP-----PGAPPPAPHVNPAFFPP 364
P PP PPG G L P P PGPP G P P V P P
Sbjct: 749 GEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPG 808
Query: 365 PTN-SGMPTSDSRGPPP----TDPYGRPP----PYDRGDYGPPGREM 402
P G+P +GPP P G+P P ++GD GPPG ++
Sbjct: 809 PMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDV 855
Score = 100 bits (249), Expect = 3e-21
Identities = 94/271 (34%), Positives = 109/271 (40%), Gaps = 63/271 (23%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-------------PGGPPP 228
G G GPPG + G +G G PG +PG PGP G PG P
Sbjct: 1188 GFGNPGPPGLPGLS----GQKGDGGLPG-IPGNPGLPGPKGEPGFHGFPGVQGPPGPPGS 1242
Query: 229 PFPAGQTPPRPPLGPPGPPGPPGPPP----PGQVLPPPLAG------------------- 265
P PA + P P GP GPPG PGP PG PP L G
Sbjct: 1243 PGPALEGPKGNP-GPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1301
Query: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP-PPVPGYGPPPGPP--PPQQGPPPPPG- 321
P +GD+ PP + G P G+P L + P P VPG+ GP P GP PG
Sbjct: 1302 PGLKGDQGPPGL--QGNP-GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGL 1358
Query: 322 ---PFPPRPPGPLGPPLTL---APPPHLPGPPPGAPPPAPHVNPAFFPPPT-------NS 368
P PP PGP G + + A PP +PG P P P P P PT +
Sbjct: 1359 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQ-GPQGLPGPTGPPGDPGRN 1417
Query: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
G+P D G DP P RG GPPG
Sbjct: 1418 GLPGFDGAGGRKGDPGLPGQPGTRGLDGPPG 1448
Score = 99.0 bits (245), Expect = 1e-20
Identities = 92/252 (36%), Positives = 102/252 (40%), Gaps = 53/252 (21%)
Query: 189 PGGSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGP 246
PG + +G +G FPG PG FPGP GP GP GQ GPPGP
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP-----RGQKGDDGIPGPPGP 88
Query: 247 PGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVL-----------FPGQPFGQPPLGPLPP 294
G GPP PG P L G P P P + FPG P G P L PP
Sbjct: 89 KGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSP-GFPGLQG-PP 146
Query: 295 GPPPPVPGYGPPPGP------PPPQQGP--PPPPG----PFPPRPPGPLGPPLTLAPPPH 342
G PP +PG PG P P+ P P PPG P P PGP+GPP PP
Sbjct: 147 G-PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPP----GPPG 201
Query: 343 LPGP--PPGAPPPAPHVNPAFFPPPTNSG-MPTSDSRGPPPTDPYGRPP----------- 388
L GP PPG P P ++ F P G GPP + P
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQG 261
Query: 389 -PYDRGDYGPPG 399
P DRG GPPG
Sbjct: 262 LPGDRGPPGPPG 273
Score = 97.8 bits (242), Expect = 2e-20
Identities = 90/240 (37%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGG---PPPPFPAG 233
G G GPPG P G G PG + PG FPGP G G P PP P G
Sbjct: 705 GIGLPGPPGPKGFPGIP-GPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPG 763
Query: 234 QTPPRPPLGPPGP---PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG 290
+ LGP G PGPPG PPG+ L GP +GD P P P G P +G
Sbjct: 764 LPGFKGALGPKGDRGFPGPPG--PPGRTGLDGLPGP--KGDVGPNGQPGPMGPPGLPGIG 819
Query: 291 PLPPGPPPPVPGYGPPPGPP-----PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPG 345
P PP +PG P G P P ++G P PPG P PPG G P P PG
Sbjct: 820 VQGPPGPPGIPG---PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSP----GIPGAPG 872
Query: 346 P--PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMD 403
P PPG+P + F P T M GPP P G P G G PG + D
Sbjct: 873 PIGPPGSPGLPGKAGASGF-PGTKGEMGMMGPPGPP--GPLGIP-----GRSGVPGLKGD 924
Score = 91.3 bits (225), Expect = 2e-18
Identities = 93/271 (34%), Positives = 105/271 (38%), Gaps = 56/271 (20%)
Query: 174 TTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG----PGGPPPP 229
T + G G GPPG G +G PG +PG GP G PG P P
Sbjct: 937 TGEKGSKGEPGLPGPPGPMDPNLL--GSKGEKGEPG-LPGIPGVSGPKGYQGLPGDPGQP 993
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP--------PNRGDRPPPPVLFPG 281
+GQ P GP G PG PG PG + PP L G P + PP P PG
Sbjct: 994 GLSGQPGLPGPPGPKGNPGLPG--QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPG 1051
Query: 282 QPFGQPPLG----------------PLPPGP--PPPVPGY----------GPP--PGPP- 310
QP G P L P PGP P +PGY G P PG P
Sbjct: 1052 QP-GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG 1110
Query: 311 -PPQQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
P +G P PG P P PPGP G ++ PP PG P P +P PP
Sbjct: 1111 TPGAKGQPGLPGFPGTPGPPGPKG----ISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Query: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
G P D P P G P G+ GPPG
Sbjct: 1167 GKPGQDGI-PGPAGQKGEPGQPGFGNPGPPG 1196
Score = 90.1 bits (222), Expect = 5e-18
Identities = 103/295 (34%), Positives = 106/295 (35%), Gaps = 78/295 (26%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV--PG-----GDR-FPGPAGPGGPP 227
Q G G GPPG P+G G PG + PG GD FPGP G GPP
Sbjct: 992 QPGLSGQPGLPGPPG-------PKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPP 1044
Query: 228 PPFPAGQTPPRP------------------------PLGPPGPPGPPGPPP-PGQVLPPP 262
P P P P G PG PG PG P G V P
Sbjct: 1045 GPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPG 1104
Query: 263 LAGPPNRGDRPPPPVL--FPGQP-------FGQPPLGPLPPGPPPPVPGYGPP--PGPP- 310
L G P P L FPG P PP P PG P PV G G P PGPP
Sbjct: 1105 LPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPG 1164
Query: 311 ----PPQQGPPPPPGP--FPPRP----PGPLGPPLTLAPPPH--LPGPPPGAPPPAPHVN 358
P Q G P P G P +P PGP G P LPG P P P
Sbjct: 1165 EKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGE 1224
Query: 359 PAF--FP----PPTNSGMPTSDSRGPP----PTDPYGRPPPYD----RGDYGPPG 399
P F FP PP G P GP P P GRP P G GPPG
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPG 1279
Score = 84.7 bits (208), Expect = 2e-16
Identities = 88/246 (35%), Positives = 96/246 (39%), Gaps = 50/246 (20%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDR--FPGPAGPGGPPP----P 229
Q G G GPPG + P G G PG V GG PGP G G P P
Sbjct: 1117 QPGLPGFPGTPGPPGPKGISG-PPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIP 1175
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQP 287
PAGQ G PG PG P PPG P L+G G P P PG P G+P
Sbjct: 1176 GPAGQK------GEPGQPGFGNPGPPGL---PGLSGQKGDGGLPGIPGNPGLPG-PKGEP 1225
Query: 288 PLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP-FPPRPPGPLGPPLTLAPPPHLPGP 346
P PP GPP P P +GP PGP PP PGP G LPGP
Sbjct: 1226 GFHGFPGVQGPP----GPPGSPGPALEGPKGNPGPQGPPGRPGPTG-------FQGLPGP 1274
Query: 347 --PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDT 404
PPG P N N G P G P P +GD GPPG + +
Sbjct: 1275 EGPPGLPG-----NGGIKGEKGNPGQP-----GLPGL-------PGLKGDQGPPGLQGNP 1317
Query: 405 ARTPLS 410
R L+
Sbjct: 1318 GRPGLN 1323
Score = 80.9 bits (198), Expect = 3e-15
Identities = 87/255 (34%), Positives = 99/255 (38%), Gaps = 43/255 (16%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-----AVPGGDRFPGPAG-------PGG 225
G+M G GPPG P G GR PG + G PGP G PG
Sbjct: 896 GEMGMMGPPGPPG-------PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL 948
Query: 226 PPPPFPA-----GQTPPRPPLGPPGPPGPPGPPP----PGQVLPPPLAGPPNRGDRPPPP 276
P PP P G + G PG PG GP PG P L+G P PP P
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGP 1007
Query: 277 VLFPGQPFGQPPLGPLPPGPPPPVPGYGPP-----PGPPPPQQGPPPPPGPFPPRPPGPL 331
PG P GQP L PPG + G P GPP P P P P P G
Sbjct: 1008 KGNPGLP-GQPGLIG-PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 332 GPP-LTLAPPPHLPGP--PPGAP--PPAPHVNPAFFPP--PTNSGMPTSDSRGPPPTDPY 384
G P ++ P LPGP PG P P P + + P P G P + + P P
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPG 1125
Query: 385 GRPPPYDRGDYGPPG 399
PP +G GPPG
Sbjct: 1126 TPGPPGPKGISGPPG 1140
Score = 79.3 bits (194), Expect = 8e-15
Identities = 97/320 (30%), Positives = 110/320 (34%), Gaps = 111/320 (34%)
Query: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPPPFPAGQTPPRP--- 239
G GPPG P G G PG++ PGP G PG P PP G P
Sbjct: 141 GLQGPPG-------PPGIPGMKGEPGSIIMSS-LPGPKGNPGYPGPPGIQGLPGPTGIPG 192
Query: 240 PLGPPGPPG---PPGPP---------------PPGQVLPPPLAGPPN-----RGDRPPPP 276
P+GPPGPPG PPGPP P G+ L GPP + P
Sbjct: 193 PIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPID 252
Query: 277 VLF----PGQPFGQPPLGPL----PPGPP---------------------------PPVP 301
V F G P + P GP PPGPP P +P
Sbjct: 253 VEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIP 312
Query: 302 GYGPPPGPP-----------PPQQGPPPPPGPFPPRP--------PGPLGPP-------- 334
G PG P GPP PPG PRP G +G P
Sbjct: 313 GLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGE 372
Query: 335 ---LTLAPPPHLPGPPPGA--PPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP-- 387
+ PP LPGPP A PP P P + G P GPP D G+P
Sbjct: 373 RGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD--GQPGA 430
Query: 388 -----PPYDRGDYGPPGREM 402
PP G + PP E+
Sbjct: 431 PGLPGPPGPAGPHIPPSDEI 450
Score = 72.8 bits (177), Expect = 8e-13
Identities = 92/287 (32%), Positives = 103/287 (35%), Gaps = 72/287 (25%)
Query: 176 QSGQMSGEGKAGPPG------GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGG-PPP 228
+ GQ G GPPG G+ +G G PG G FPG GP G P P
Sbjct: 329 EKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE-KGERGFPGIQGPPGLPGP 387
Query: 229 PFPAGQTPPRPP--------LGPPGPPGPPGPPPP---GQVLPPPLAGPPNRGDRPPPPV 277
P A PP PP G GPPG P PP GQ P L GPP P P
Sbjct: 388 PGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPG----PAGPH 443
Query: 278 LFPGQPFGQPPLGPLPPGPP--PPVPGYGPPPGPPPPQ------------QGPPPPPG-P 322
+ P +P PPGPP P G G + GPP PG P
Sbjct: 444 IPPSDEICEPG----PPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 323 FPPRPPGPLGPP--------LTLAPPPHLPGPP--PGAPP-PAPHVNPA---FFP----- 363
P PPG LG P P LPG P PGAP P P FP
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559
Query: 364 --------PPTNSGMPTSDSRG--PPPTDPYGRPPPYD-RGDYGPPG 399
P G+P + + P P G P +G+ GPPG
Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPG 606
Score = 71.6 bits (174), Expect = 2e-12
Identities = 61/161 (37%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 183 EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG 242
+G GPPG P G G PG +PG FPG GP G P AG +G
Sbjct: 1305 KGDQGPPGLQGNPGRP-GLNGMKGDPG-LPGVPGFPGMKGPSGVPGS--AGPEGEPGLIG 1360
Query: 243 PPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP--PVLFPGQ--PFGQPPLGPLP 293
PPGPPG PGP ++ PP + G P P P P PG P G P LP
Sbjct: 1361 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLP 1420
Query: 294 -----------PGPP--PPVPGYGPPPGPPPPQQGPPPPPG 321
PG P P G PPGP QGPP PPG
Sbjct: 1421 GFDGAGGRKGDPGLPGQPGTRGLDGPPGPDG-LQGPPGPPG 1460
Score = 46.6 bits (109), Expect = 6e-05
Identities = 36/108 (33%), Positives = 42/108 (38%), Gaps = 19/108 (17%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
+ G + G G PG S ++ +G G PG PG PGP GP G P P
Sbjct: 1355 EPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQ-PGLKGLPGPQGPQGLPGPTGPPGD 1413
Query: 236 PPRPPL----------------GPPGPPGPPGPPPPGQVLPPPLAGPP 267
P R L G PG G GPP P + PP GPP
Sbjct: 1414 PGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPP--GPP 1459
Score = 43.9 bits (102), Expect = 4e-04
Identities = 37/91 (40%), Positives = 40/91 (43%), Gaps = 19/91 (20%)
Query: 183 EGKAGPPG-----GSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGGPP--PPF 230
+G AGPPG G PQG +G PG PG + PG G GG P
Sbjct: 1378 KGDAGPPGIPGQPGLKGLPGPQGPQG---LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGL 1434
Query: 231 PAGQTPPRPPLGPPGPPG---PPGPPPPGQV 258
P GQ R GPPGP G PPGPP V
Sbjct: 1435 P-GQPGTRGLDGPPGPDGLQGPPGPPGTSSV 1464
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
GQ +G GP G G P G GR PG G R P PG P G
Sbjct: 1388 GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP 1447
Query: 236 PPRPPLGPPGPPG 248
P GPPGPPG
Sbjct: 1448 GPDGLQGPPGPPG 1460
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 107 bits (266), Expect = 4e-23
Identities = 104/287 (36%), Positives = 117/287 (40%), Gaps = 72/287 (25%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP---PPFPAGQ 234
GQ G GP G F +G RG P PG PG GP GPP PP P G+
Sbjct: 579 GQDGLPGLPGPKGEPGGITF-KGERG----PPGNPGLPGLPGNIGPMGPPGFGPPGPVGE 633
Query: 235 TPPRPPLGPPGPPGPPGPP-PPGQVLPPP----LAGPPNR-GDRPPPPVLFPGQPF--GQ 286
+ G PG PG PGP PGQ + P L G P R GD V PG P GQ
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD-----VGLPGDPGLPGQ 688
Query: 287 PPLGPLP-------------PGPPPP--VPGYGPPPGPPPPQ-----QGPPPPPG----- 321
P L +P PGPP P PG PPG P +GPP PPG
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPK 748
Query: 322 -------PFPPRPPGPLGPPLTLAPP-----PHLPGPP-----PGAPPPAPHVNPAFFPP 364
P PP PPG G L P P PGPP G P P V P P
Sbjct: 749 GEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPG 808
Query: 365 PTN-SGMPTSDSRGPPP----TDPYGRPP----PYDRGDYGPPGREM 402
P G+P +GPP P G+P P ++GD GPPG ++
Sbjct: 809 PMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDV 855
Score = 102 bits (253), Expect = 1e-21
Identities = 94/267 (35%), Positives = 109/267 (40%), Gaps = 61/267 (22%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG----------------PGG 225
G G GPPG + G +G G PG +PG PGP G PG
Sbjct: 1188 GFGNPGPPGLPGLS----GQKGDGGLPG-IPGNPGLPGPKGEPGFHGFPGVQGPPGPPGS 1242
Query: 226 PPPPF--PAGQTPPRPPLGPPGPPGPPGPP-------------PPGQVLPPPLAGPPN-R 269
P P P G P+ P G PG PGP GPP PGQ P L G P +
Sbjct: 1243 PGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQ---PGLPGLPGLK 1299
Query: 270 GDRPPPPVLFPGQPFGQPPLGPLPPGPP-PPVPGYGPPPGPP--PPQQGPPPPPG----P 322
GD+ PP + G P G+P L + P P VPG+ GP P GP PG P
Sbjct: 1300 GDQGPPGL--QGNP-GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP 1356
Query: 323 FPPRPPGPLGPPLTL---APPPHLPGPPPGAPPPAPHVNPAFFPPPT-------NSGMPT 372
PP PGP G + + A PP +PG P P P P P PT +G+P
Sbjct: 1357 GPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQ-GPQGLPGPTGPPGDPGRNGLPG 1415
Query: 373 SDSRGPPPTDPYGRPPPYDRGDYGPPG 399
D G DP P RG GPPG
Sbjct: 1416 FDGAGGRKGDPGLPGQPGTRGLDGPPG 1442
Score = 99.0 bits (245), Expect = 1e-20
Identities = 92/252 (36%), Positives = 102/252 (40%), Gaps = 53/252 (21%)
Query: 189 PGGSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGP 246
PG + +G +G FPG PG FPGP GP GP GQ GPPGP
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP-----RGQKGDDGIPGPPGP 88
Query: 247 PGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVL-----------FPGQPFGQPPLGPLPP 294
G GPP PG P L G P P P + FPG P G P L PP
Sbjct: 89 KGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSP-GFPGLQG-PP 146
Query: 295 GPPPPVPGYGPPPGP------PPPQQGP--PPPPG----PFPPRPPGPLGPPLTLAPPPH 342
G PP +PG PG P P+ P P PPG P P PGP+GPP PP
Sbjct: 147 G-PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPP----GPPG 201
Query: 343 LPGP--PPGAPPPAPHVNPAFFPPPTNSG-MPTSDSRGPPPTDPYGRPP----------- 388
L GP PPG P P ++ F P G GPP + P
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQG 261
Query: 389 -PYDRGDYGPPG 399
P DRG GPPG
Sbjct: 262 LPGDRGPPGPPG 273
Score = 97.8 bits (242), Expect = 2e-20
Identities = 90/240 (37%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGG---PPPPFPAG 233
G G GPPG P G G PG + PG FPGP G G P PP P G
Sbjct: 705 GIGLPGPPGPKGFPGIP-GPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPG 763
Query: 234 QTPPRPPLGPPGP---PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG 290
+ LGP G PGPPG PPG+ L GP +GD P P P G P +G
Sbjct: 764 LPGFKGALGPKGDRGFPGPPG--PPGRTGLDGLPGP--KGDVGPNGQPGPMGPPGLPGIG 819
Query: 291 PLPPGPPPPVPGYGPPPGPP-----PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPG 345
P PP +PG P G P P ++G P PPG P PPG G P P PG
Sbjct: 820 VQGPPGPPGIPG---PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSP----GIPGAPG 872
Query: 346 P--PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMD 403
P PPG+P + F P T M GPP P G P G G PG + D
Sbjct: 873 PIGPPGSPGLPGKAGASGF-PGTKGEMGMMGPPGPP--GPLGIP-----GRSGVPGLKGD 924
Score = 91.7 bits (226), Expect = 2e-18
Identities = 108/335 (32%), Positives = 117/335 (34%), Gaps = 109/335 (32%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV--PG-----GDR-FPGPAGPGGPP 227
Q G G GPPG P+G G PG + PG GD FPGP G GPP
Sbjct: 992 QPGLSGQPGLPGPPG-------PKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPP 1044
Query: 228 PPFPAGQTPPRP------------------------PLGPPGPPGPPGPPP-PGQVLPPP 262
P P P P G PG PG PG P G V P
Sbjct: 1045 GPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPG 1104
Query: 263 LAGPPNRGDRPPPPVL--FPGQP-------FGQPPLGPLPPGPPPPVPGYGPP--PGPP- 310
L G P P L FPG P PP P PG P PV G G P PGPP
Sbjct: 1105 LPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPG 1164
Query: 311 ----PPQQGPPPPPG------------PFPPRPPGPLGPPLTLAPP-----PHLPGP--- 346
P Q G P P G P PP PG G P P LPGP
Sbjct: 1165 EKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGE 1224
Query: 347 --------------PPGAPPPA---PHVNPAFFPPPTNSGMPTSDSRGPP---------- 379
PPG+P PA P NP PP G+P + GPP
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPE--GPPGLPGNGGIKG 1282
Query: 380 ----PTDPYGRPPPYDRGDYGPPGREMDTARTPLS 410
P P P +GD GPPG + + R L+
Sbjct: 1283 EKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1317
Score = 91.3 bits (225), Expect = 2e-18
Identities = 93/271 (34%), Positives = 105/271 (38%), Gaps = 56/271 (20%)
Query: 174 TTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG----PGGPPPP 229
T + G G GPPG G +G PG +PG GP G PG P P
Sbjct: 937 TGEKGSKGEPGLPGPPGPMDPNLL--GSKGEKGEPG-LPGIPGVSGPKGYQGLPGDPGQP 993
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP--------PNRGDRPPPPVLFPG 281
+GQ P GP G PG PG PG + PP L G P + PP P PG
Sbjct: 994 GLSGQPGLPGPPGPKGNPGLPG--QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPG 1051
Query: 282 QPFGQPPLG----------------PLPPGP--PPPVPGY----------GPP--PGPP- 310
QP G P L P PGP P +PGY G P PG P
Sbjct: 1052 QP-GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG 1110
Query: 311 -PPQQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
P +G P PG P P PPGP G ++ PP PG P P +P PP
Sbjct: 1111 TPGAKGQPGLPGFPGTPGPPGPKG----ISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Query: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
G P D P P G P G+ GPPG
Sbjct: 1167 GKPGQDGI-PGPAGQKGEPGQPGFGNPGPPG 1196
Score = 80.9 bits (198), Expect = 3e-15
Identities = 87/255 (34%), Positives = 99/255 (38%), Gaps = 43/255 (16%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-----AVPGGDRFPGPAG-------PGG 225
G+M G GPPG P G GR PG + G PGP G PG
Sbjct: 896 GEMGMMGPPGPPG-------PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL 948
Query: 226 PPPPFPA-----GQTPPRPPLGPPGPPGPPGPPP----PGQVLPPPLAGPPNRGDRPPPP 276
P PP P G + G PG PG GP PG P L+G P PP P
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGP 1007
Query: 277 VLFPGQPFGQPPLGPLPPGPPPPVPGYGPP-----PGPPPPQQGPPPPPGPFPPRPPGPL 331
PG P GQP L PPG + G P GPP P P P P P G
Sbjct: 1008 KGNPGLP-GQPGLIG-PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 332 GPP-LTLAPPPHLPGP--PPGAP--PPAPHVNPAFFPP--PTNSGMPTSDSRGPPPTDPY 384
G P ++ P LPGP PG P P P + + P P G P + + P P
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPG 1125
Query: 385 GRPPPYDRGDYGPPG 399
PP +G GPPG
Sbjct: 1126 TPGPPGPKGISGPPG 1140
Score = 79.3 bits (194), Expect = 8e-15
Identities = 97/320 (30%), Positives = 110/320 (34%), Gaps = 111/320 (34%)
Query: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPPPFPAGQTPPRP--- 239
G GPPG P G G PG++ PGP G PG P PP G P
Sbjct: 141 GLQGPPG-------PPGIPGMKGEPGSIIMSS-LPGPKGNPGYPGPPGIQGLPGPTGIPG 192
Query: 240 PLGPPGPPG---PPGPP---------------PPGQVLPPPLAGPPN-----RGDRPPPP 276
P+GPPGPPG PPGPP P G+ L GPP + P
Sbjct: 193 PIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPID 252
Query: 277 VLF----PGQPFGQPPLGPL----PPGPP---------------------------PPVP 301
V F G P + P GP PPGPP P +P
Sbjct: 253 VEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIP 312
Query: 302 GYGPPPGPP-----------PPQQGPPPPPGPFPPRP--------PGPLGPP-------- 334
G PG P GPP PPG PRP G +G P
Sbjct: 313 GLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGE 372
Query: 335 ---LTLAPPPHLPGPPPGA--PPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP-- 387
+ PP LPGPP A PP P P + G P GPP D G+P
Sbjct: 373 RGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD--GQPGA 430
Query: 388 -----PPYDRGDYGPPGREM 402
PP G + PP E+
Sbjct: 431 PGLPGPPGPAGPHIPPSDEI 450
Score = 72.8 bits (177), Expect = 8e-13
Identities = 92/287 (32%), Positives = 103/287 (35%), Gaps = 72/287 (25%)
Query: 176 QSGQMSGEGKAGPPG------GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGG-PPP 228
+ GQ G GPPG G+ +G G PG G FPG GP G P P
Sbjct: 329 EKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE-KGERGFPGIQGPPGLPGP 387
Query: 229 PFPAGQTPPRPP--------LGPPGPPGPPGPPPP---GQVLPPPLAGPPNRGDRPPPPV 277
P A PP PP G GPPG P PP GQ P L GPP P P
Sbjct: 388 PGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPG----PAGPH 443
Query: 278 LFPGQPFGQPPLGPLPPGPP--PPVPGYGPPPGPPPPQ------------QGPPPPPG-P 322
+ P +P PPGPP P G G + GPP PG P
Sbjct: 444 IPPSDEICEPG----PPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 323 FPPRPPGPLGPP--------LTLAPPPHLPGPP--PGAPP-PAPHVNPA---FFP----- 363
P PPG LG P P LPG P PGAP P P FP
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559
Query: 364 --------PPTNSGMPTSDSRG--PPPTDPYGRPPPYD-RGDYGPPG 399
P G+P + + P P G P +G+ GPPG
Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPG 606
Score = 71.6 bits (174), Expect = 2e-12
Identities = 61/161 (37%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 183 EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG 242
+G GPPG P G G PG +PG FPG GP G P AG +G
Sbjct: 1299 KGDQGPPGLQGNPGRP-GLNGMKGDPG-LPGVPGFPGMKGPSGVPGS--AGPEGEPGLIG 1354
Query: 243 PPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP--PVLFPGQ--PFGQPPLGPLP 293
PPGPPG PGP ++ PP + G P P P P PG P G P LP
Sbjct: 1355 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLP 1414
Query: 294 -----------PGPP--PPVPGYGPPPGPPPPQQGPPPPPG 321
PG P P G PPGP QGPP PPG
Sbjct: 1415 GFDGAGGRKGDPGLPGQPGTRGLDGPPGPDG-LQGPPGPPG 1454
Score = 46.6 bits (109), Expect = 6e-05
Identities = 36/108 (33%), Positives = 42/108 (38%), Gaps = 19/108 (17%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
+ G + G G PG S ++ +G G PG PG PGP GP G P P
Sbjct: 1349 EPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQ-PGLKGLPGPQGPQGLPGPTGPPGD 1407
Query: 236 PPRPPL----------------GPPGPPGPPGPPPPGQVLPPPLAGPP 267
P R L G PG G GPP P + PP GPP
Sbjct: 1408 PGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPP--GPP 1453
Score = 43.9 bits (102), Expect = 4e-04
Identities = 37/91 (40%), Positives = 40/91 (43%), Gaps = 19/91 (20%)
Query: 183 EGKAGPPG-----GSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGGPP--PPF 230
+G AGPPG G PQG +G PG PG + PG G GG P
Sbjct: 1372 KGDAGPPGIPGQPGLKGLPGPQGPQG---LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGL 1428
Query: 231 PAGQTPPRPPLGPPGPPG---PPGPPPPGQV 258
P GQ R GPPGP G PPGPP V
Sbjct: 1429 P-GQPGTRGLDGPPGPDGLQGPPGPPGTSSV 1458
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
GQ +G GP G G P G GR PG G R P PG P G
Sbjct: 1382 GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP 1441
Query: 236 PPRPPLGPPGPPG 248
P GPPGPPG
Sbjct: 1442 GPDGLQGPPGPPG 1454
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 107 bits (266), Expect = 4e-23
Identities = 104/287 (36%), Positives = 117/287 (40%), Gaps = 72/287 (25%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP---PPFPAGQ 234
GQ G GP G F +G RG P PG PG GP GPP PP P G+
Sbjct: 579 GQDGLPGLPGPKGEPGGITF-KGERG----PPGNPGLPGLPGNIGPMGPPGFGPPGPVGE 633
Query: 235 TPPRPPLGPPGPPGPPGPP-PPGQVLPPP----LAGPPNR-GDRPPPPVLFPGQPF--GQ 286
+ G PG PG PGP PGQ + P L G P R GD V PG P GQ
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD-----VGLPGDPGLPGQ 688
Query: 287 PPLGPLP-------------PGPPPP--VPGYGPPPGPPPPQ-----QGPPPPPG----- 321
P L +P PGPP P PG PPG P +GPP PPG
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPK 748
Query: 322 -------PFPPRPPGPLGPPLTLAPP-----PHLPGPP-----PGAPPPAPHVNPAFFPP 364
P PP PPG G L P P PGPP G P P V P P
Sbjct: 749 GEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPG 808
Query: 365 PTN-SGMPTSDSRGPPP----TDPYGRPP----PYDRGDYGPPGREM 402
P G+P +GPP P G+P P ++GD GPPG ++
Sbjct: 809 PMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDV 855
Score = 99.0 bits (245), Expect = 1e-20
Identities = 92/252 (36%), Positives = 102/252 (40%), Gaps = 53/252 (21%)
Query: 189 PGGSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGP 246
PG + +G +G FPG PG FPGP GP GP GQ GPPGP
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGP-----RGQKGDDGIPGPPGP 88
Query: 247 PGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVL-----------FPGQPFGQPPLGPLPP 294
G GPP PG P L G P P P + FPG P G P L PP
Sbjct: 89 KGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSP-GFPGLQG-PP 146
Query: 295 GPPPPVPGYGPPPGP------PPPQQGP--PPPPG----PFPPRPPGPLGPPLTLAPPPH 342
G PP +PG PG P P+ P P PPG P P PGP+GPP PP
Sbjct: 147 G-PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPP----GPPG 201
Query: 343 LPGP--PPGAPPPAPHVNPAFFPPPTNSG-MPTSDSRGPPPTDPYGRPP----------- 388
L GP PPG P P ++ F P G GPP + P
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQG 261
Query: 389 -PYDRGDYGPPG 399
P DRG GPPG
Sbjct: 262 LPGDRGPPGPPG 273
Score = 97.8 bits (242), Expect = 2e-20
Identities = 90/240 (37%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGG---PPPPFPAG 233
G G GPPG P G G PG + PG FPGP G G P PP P G
Sbjct: 705 GIGLPGPPGPKGFPGIP-GPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPG 763
Query: 234 QTPPRPPLGPPGP---PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG 290
+ LGP G PGPPG PPG+ L GP +GD P P P G P +G
Sbjct: 764 LPGFKGALGPKGDRGFPGPPG--PPGRTGLDGLPGP--KGDVGPNGQPGPMGPPGLPGIG 819
Query: 291 PLPPGPPPPVPGYGPPPGPP-----PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPG 345
P PP +PG P G P P ++G P PPG P PPG G P P PG
Sbjct: 820 VQGPPGPPGIPG---PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSP----GIPGAPG 872
Query: 346 P--PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMD 403
P PPG+P + F P T M GPP P G P G G PG + D
Sbjct: 873 PIGPPGSPGLPGKAGASGF-PGTKGEMGMMGPPGPP--GPLGIP-----GRSGVPGLKGD 924
Score = 97.8 bits (242), Expect = 2e-20
Identities = 94/267 (35%), Positives = 108/267 (40%), Gaps = 58/267 (21%)
Query: 182 GEGKAGPPGGSSRAAFPQGGRGRGRFPG-----------AVPGGDRFPGPAGPGGPP-PP 229
G G GPPG + G +G G PG PG FPG GP GPP P
Sbjct: 1188 GFGNPGPPGLPGLS----GQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Query: 230 FPAGQTPPRPPLGPPGPPGPPG-PPPPGQVLPPPLAG-------------------PPNR 269
PA + P P GP GPPG PG PG PP L G P +
Sbjct: 1244 GPALEGPKGNP-GPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLK 1302
Query: 270 GDRPPPPVLFPGQPFGQPPLGPLPPGPP-PPVPGYGPPPGPP--PPQQGPPPPPG----P 322
GD+ PP + G P G+P L + P P VPG+ GP P GP PG P
Sbjct: 1303 GDQGPPGL--QGNP-GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP 1359
Query: 323 FPPRPPGPLGPPLTL---APPPHLPGPPPGAPPPAPHVNPAFFPPPT-------NSGMPT 372
PP PGP G + + A PP +PG P P P P P PT +G+P
Sbjct: 1360 GPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQ-GPQGLPGPTGPPGDPGRNGLPG 1418
Query: 373 SDSRGPPPTDPYGRPPPYDRGDYGPPG 399
D G DP P RG GPPG
Sbjct: 1419 FDGAGGRKGDPGLPGQPGTRGLDGPPG 1445
Score = 95.9 bits (237), Expect = 9e-20
Identities = 97/272 (35%), Positives = 106/272 (38%), Gaps = 62/272 (22%)
Query: 180 MSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGPGGPP--PPFPAGQT 235
+S G G PG P G G G+V PG PG G G P P FP
Sbjct: 1070 ISSIGLPGLPGPKGEPGLP-GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPG 1128
Query: 236 PPRPP--LGPPGPPGPPGPPPP-------GQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
PP P GPPG PG PG P P GQ PP G P + D P P G+P GQ
Sbjct: 1129 PPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQ-DGIPGPAGQKGEP-GQ 1186
Query: 287 PPLG-PLPPGPP-----------PPVPGYGPPPGPP--------PPQQGPPPPPGPFPPR 326
P G P PPG P P +PG PGP P QGPP PPG P
Sbjct: 1187 PGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPA 1246
Query: 327 PPGPLGPPLTLAPPPH-----LPGP--PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPP 379
GP G P PP LPGP PPG P N N G P
Sbjct: 1247 LEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPG-----NGGIKGEKGNPGQP-------- 1293
Query: 380 PTDPYGRPP-PYDRGDYGPPGREMDTARTPLS 410
G P P +GD GPPG + + R L+
Sbjct: 1294 -----GLPGLPGLKGDQGPPGLQGNPGRPGLN 1320
Score = 91.3 bits (225), Expect = 2e-18
Identities = 93/271 (34%), Positives = 105/271 (38%), Gaps = 56/271 (20%)
Query: 174 TTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG----PGGPPPP 229
T + G G GPPG G +G PG +PG GP G PG P P
Sbjct: 937 TGEKGSKGEPGLPGPPGPMDPNLL--GSKGEKGEPG-LPGIPGVSGPKGYQGLPGDPGQP 993
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP--------PNRGDRPPPPVLFPG 281
+GQ P GP G PG PG PG + PP L G P + PP P PG
Sbjct: 994 GLSGQPGLPGPPGPKGNPGLPG--QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPG 1051
Query: 282 QPFGQPPLG----------------PLPPGP--PPPVPGY----------GPP--PGPP- 310
QP G P L P PGP P +PGY G P PG P
Sbjct: 1052 QP-GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPG 1110
Query: 311 -PPQQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
P +G P PG P P PPGP G ++ PP PG P P +P PP
Sbjct: 1111 TPGAKGQPGLPGFPGTPGPPGPKG----ISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Query: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
G P D P P G P G+ GPPG
Sbjct: 1167 GKPGQDGI-PGPAGQKGEPGQPGFGNPGPPG 1196
Score = 90.1 bits (222), Expect = 5e-18
Identities = 99/283 (34%), Positives = 102/283 (36%), Gaps = 70/283 (24%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV--PG-----GDR-FPGPAGPGGPP 227
Q G G GPPG P+G G PG + PG GD FPGP G GPP
Sbjct: 992 QPGLSGQPGLPGPPG-------PKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPP 1044
Query: 228 PPFPAGQTPPRP------------------------PLGPPGPPGPPGPPP-PGQVLPPP 262
P P P P G PG PG PG P G V P
Sbjct: 1045 GPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPG 1104
Query: 263 LAGPPNRGDRPPPPVL--FPGQP-------FGQPPLGPLPPGPPPPVPGYGPP--PGPP- 310
L G P P L FPG P PP P PG P PV G G P PGPP
Sbjct: 1105 LPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPG 1164
Query: 311 ----PPQQGPPPPPGP--FPPRP----PGPLGPPLTLAPPPH--LPGPPPGAPPPAPHVN 358
P Q G P P G P +P PGP G P LPG P P P
Sbjct: 1165 EKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGE 1224
Query: 359 PAFFPPPTNSGMP-TSDSRGPPPTDPYGRPPPYDRGDYGPPGR 400
P F P G P S GP P G P G GPPGR
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNP-----GPQGPPGR 1262
Score = 83.6 bits (205), Expect = 4e-16
Identities = 101/279 (36%), Positives = 108/279 (38%), Gaps = 68/279 (24%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDR--FPGPAGPGGPPP----P 229
Q G G GPPG + P G G PG V GG PGP G G P P
Sbjct: 1117 QPGLPGFPGTPGPPGPKGISG-PPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIP 1175
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQP 287
PAGQ G PG PG P PPG P L+G G P P PG P G+P
Sbjct: 1176 GPAGQK------GEPGQPGFGNPGPPGL---PGLSGQKGDGGLPGIPGNPGLPG-PKGEP 1225
Query: 288 -----PLGPLPPGPP-PPVPGYGPPPGPPPPQQGPPPPPG----PFPPRPPG-------- 329
P PPGPP P P P G P P QGPP PG P P PPG
Sbjct: 1226 GFHGFPGVQGPPGPPGSPGPALEGPKGNPGP-QGPPGRPGFQGLPGPEGPPGLPGNGGIK 1284
Query: 330 -----PLGPPLTLAP-------PPHLPGPP--PG-----APPPAPHVNPAFFPPPTNSGM 370
P P L P PP L G P PG P P V P F SG+
Sbjct: 1285 GEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGV-PGFPGMKGPSGV 1343
Query: 371 P-TSDSRGPP----PTDPYGRPPPYD-----RGDYGPPG 399
P ++ G P P P G P P +GD GPPG
Sbjct: 1344 PGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPG 1382
Score = 80.9 bits (198), Expect = 3e-15
Identities = 87/255 (34%), Positives = 99/255 (38%), Gaps = 43/255 (16%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-----AVPGGDRFPGPAG-------PGG 225
G+M G GPPG P G GR PG + G PGP G PG
Sbjct: 896 GEMGMMGPPGPPG-------PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL 948
Query: 226 PPPPFPA-----GQTPPRPPLGPPGPPGPPGPPP----PGQVLPPPLAGPPNRGDRPPPP 276
P PP P G + G PG PG GP PG P L+G P PP P
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGP 1007
Query: 277 VLFPGQPFGQPPLGPLPPGPPPPVPGYGPP-----PGPPPPQQGPPPPPGPFPPRPPGPL 331
PG P GQP L PPG + G P GPP P P P P P G
Sbjct: 1008 KGNPGLP-GQPGLIG-PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 332 GPP-LTLAPPPHLPGP--PPGAP--PPAPHVNPAFFPP--PTNSGMPTSDSRGPPPTDPY 384
G P ++ P LPGP PG P P P + + P P G P + + P P
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPG 1125
Query: 385 GRPPPYDRGDYGPPG 399
PP +G GPPG
Sbjct: 1126 TPGPPGPKGISGPPG 1140
Score = 79.3 bits (194), Expect = 8e-15
Identities = 97/320 (30%), Positives = 110/320 (34%), Gaps = 111/320 (34%)
Query: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPPPFPAGQTPPRP--- 239
G GPPG P G G PG++ PGP G PG P PP G P
Sbjct: 141 GLQGPPG-------PPGIPGMKGEPGSIIMSS-LPGPKGNPGYPGPPGIQGLPGPTGIPG 192
Query: 240 PLGPPGPPG---PPGPP---------------PPGQVLPPPLAGPPN-----RGDRPPPP 276
P+GPPGPPG PPGPP P G+ L GPP + P
Sbjct: 193 PIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPID 252
Query: 277 VLF----PGQPFGQPPLGPL----PPGPP---------------------------PPVP 301
V F G P + P GP PPGPP P +P
Sbjct: 253 VEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIP 312
Query: 302 GYGPPPGPP-----------PPQQGPPPPPGPFPPRP--------PGPLGPP-------- 334
G PG P GPP PPG PRP G +G P
Sbjct: 313 GLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGE 372
Query: 335 ---LTLAPPPHLPGPPPGA--PPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP-- 387
+ PP LPGPP A PP P P + G P GPP D G+P
Sbjct: 373 RGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD--GQPGA 430
Query: 388 -----PPYDRGDYGPPGREM 402
PP G + PP E+
Sbjct: 431 PGLPGPPGPAGPHIPPSDEI 450
Score = 72.8 bits (177), Expect = 8e-13
Identities = 92/287 (32%), Positives = 103/287 (35%), Gaps = 72/287 (25%)
Query: 176 QSGQMSGEGKAGPPG------GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGG-PPP 228
+ GQ G GPPG G+ +G G PG G FPG GP G P P
Sbjct: 329 EKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE-KGERGFPGIQGPPGLPGP 387
Query: 229 PFPAGQTPPRPP--------LGPPGPPGPPGPPPP---GQVLPPPLAGPPNRGDRPPPPV 277
P A PP PP G GPPG P PP GQ P L GPP P P
Sbjct: 388 PGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPG----PAGPH 443
Query: 278 LFPGQPFGQPPLGPLPPGPP--PPVPGYGPPPGPPPPQ------------QGPPPPPG-P 322
+ P +P PPGPP P G G + GPP PG P
Sbjct: 444 IPPSDEICEPG----PPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 323 FPPRPPGPLGPP--------LTLAPPPHLPGPP--PGAPP-PAPHVNPA---FFP----- 363
P PPG LG P P LPG P PGAP P P FP
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559
Query: 364 --------PPTNSGMPTSDSRG--PPPTDPYGRPPPYD-RGDYGPPG 399
P G+P + + P P G P +G+ GPPG
Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPG 606
Score = 71.6 bits (174), Expect = 2e-12
Identities = 61/161 (37%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 183 EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG 242
+G GPPG P G G PG +PG FPG GP G P AG +G
Sbjct: 1302 KGDQGPPGLQGNPGRP-GLNGMKGDPG-LPGVPGFPGMKGPSGVPGS--AGPEGEPGLIG 1357
Query: 243 PPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP--PVLFPGQ--PFGQPPLGPLP 293
PPGPPG PGP ++ PP + G P P P P PG P G P LP
Sbjct: 1358 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLP 1417
Query: 294 -----------PGPP--PPVPGYGPPPGPPPPQQGPPPPPG 321
PG P P G PPGP QGPP PPG
Sbjct: 1418 GFDGAGGRKGDPGLPGQPGTRGLDGPPGPDG-LQGPPGPPG 1457
Score = 46.6 bits (109), Expect = 6e-05
Identities = 36/108 (33%), Positives = 42/108 (38%), Gaps = 19/108 (17%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
+ G + G G PG S ++ +G G PG PG PGP GP G P P
Sbjct: 1352 EPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQ-PGLKGLPGPQGPQGLPGPTGPPGD 1410
Query: 236 PPRPPL----------------GPPGPPGPPGPPPPGQVLPPPLAGPP 267
P R L G PG G GPP P + PP GPP
Sbjct: 1411 PGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPP--GPP 1456
Score = 43.9 bits (102), Expect = 4e-04
Identities = 37/91 (40%), Positives = 40/91 (43%), Gaps = 19/91 (20%)
Query: 183 EGKAGPPG-----GSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGGPP--PPF 230
+G AGPPG G PQG +G PG PG + PG G GG P
Sbjct: 1375 KGDAGPPGIPGQPGLKGLPGPQGPQG---LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGL 1431
Query: 231 PAGQTPPRPPLGPPGPPG---PPGPPPPGQV 258
P GQ R GPPGP G PPGPP V
Sbjct: 1432 P-GQPGTRGLDGPPGPDGLQGPPGPPGTSSV 1461
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
GQ +G GP G G P G GR PG G R P PG P G
Sbjct: 1385 GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP 1444
Query: 236 PPRPPLGPPGPPG 248
P GPPGPPG
Sbjct: 1445 GPDGLQGPPGPPG 1457
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 106 bits (264), Expect = 6e-23
Identities = 79/210 (37%), Positives = 88/210 (41%), Gaps = 49/210 (23%)
Query: 226 PPPPFPAGQT--PPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP---PPVLFP 280
PPP P +T PP PP PP PP G+ PP GP + D P PP P
Sbjct: 351 PPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPP---GPVDATDLPKVQIPPPAHP 407
Query: 281 GQPFGQPPLGPLPPGPPPPVP-----------------GY----------GPPPGPPPPQ 313
P QPP PLP PPPP P GY GP G PP
Sbjct: 408 A-PVHQPP--PLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPA 464
Query: 314 QGPPP----PPGPFPPR-PPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
GPP P +PP PP P+ PP PPP +P P PG PPP P NP F PPP
Sbjct: 465 YGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPR- 523
Query: 369 GMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
+P + + P P G PP Y PP
Sbjct: 524 -LPPTHAVPPHPPPGLGLPP----ASYPPP 548
Score = 99.4 bits (246), Expect = 8e-21
Identities = 81/217 (37%), Positives = 88/217 (40%), Gaps = 49/217 (22%)
Query: 208 PGAVPGGDRFPGPAGP-GGPPPPFPAGQTP-PRPPLGPPGPPGPPGPPPPGQVLPPP--- 262
P A P DR P A G PP P T P+ + PP P P PPP PPP
Sbjct: 366 PPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPPP 425
Query: 263 -------------LAGP-------------PNRGDRPP---PPVLFPGQPFGQPPLGPLP 293
++G P+ G PP PP P P PP P P
Sbjct: 426 SSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPP 485
Query: 294 PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPR-PPGPLGPPLTLAPPPHLPGPPPGAP- 351
P PPPP PPP PPP G PPPP + P PP P P T A PPH PPPG
Sbjct: 486 PVPPPPASF--PPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPH---PPPGLGL 540
Query: 352 PPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPP 388
PPA + PA P G P PPP P G PP
Sbjct: 541 PPASYPPPAVPP----GGQPPV----PPPIPPPGMPP 569
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 105 bits (262), Expect = 1e-22
Identities = 96/286 (33%), Positives = 111/286 (38%), Gaps = 78/286 (27%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPP 237
G+ +G GP G QG RG G +PG PGP+G G P G T P
Sbjct: 734 GEPGAKGAMGPAGPDGH----QGPRGEQGLTG-MPGIRGPPGPSGDPGKP-----GLTGP 783
Query: 238 RPPLGPPGPPGPPG----PPPPGQVLPPP------LAGPPNRGDRPPPPVLFPGQPFGQP 287
+ P G PG PG PG P PG+++ + GPP PP + PG P
Sbjct: 784 QGPQGLPGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPG----PPGAMGPPGPPGAPG 839
Query: 288 PLGPL-------------PPGPP----PPVPGYGPPPGP--PPPQ--QGPPPPPGPF--- 323
P GP PPGPP PP P PPGP PP + GPP PPG F
Sbjct: 840 PAGPAGLPGHQEVLNLQGPPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGPPGSFLSN 899
Query: 324 -------PPRPPGPLGPPLTLAPP--------PHLPG--------------PPPGAP-PP 353
PP PPGP GP PP LPG PPG P P
Sbjct: 900 SETFLSGPPGPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQ 959
Query: 354 APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
P + P G+P+ S G + Y PP G GPPG
Sbjct: 960 GPKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPPG 1005
Score = 101 bits (252), Expect = 2e-21
Identities = 98/281 (34%), Positives = 108/281 (38%), Gaps = 62/281 (22%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRG----RGRFPGAV--PGGDRFPGPAGPGGPPPP 229
G +G GPPG G P+G G RG PGAV PG GPAGP G P
Sbjct: 695 GVKGDKGPMGPPGPKGDQGEKGPRGLTGEPGMRG-LPGAVGEPGAKGAMGPAGPDGHQGP 753
Query: 230 FPAGQTPPRPPL-GPPGPPGPPGPP----PPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
P + GPPGP G PG P P G P G P P P
Sbjct: 754 RGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGEPGAPGKIVTSEG 813
Query: 285 GQPPLGPLPPGPPPPVPGYGPP--PGPPPPQ-----------QGPPPPP------GPFPP 325
P PPGPP + GPP PGP P QGPP PP GP P
Sbjct: 814 SSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGPSIP 873
Query: 326 RPPGPLGPP-------------------LTLAPPPHLPGPP-----PGAPPPAPHVNPAF 361
PPGP GPP L+ PP PGPP G P P H
Sbjct: 874 GPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQGPPGPRGHQGEQG 933
Query: 362 FPPPTNSGMPT--SDSRGPP-PTDPYGRPPPYDRGDYGPPG 399
P + SG + + +GPP P P G P D+GD G PG
Sbjct: 934 LPGFSTSGSSSFGLNLQGPPGPPGPQG--PKGDKGDPGVPG 972
Score = 96.3 bits (238), Expect = 7e-20
Identities = 98/290 (33%), Positives = 109/290 (37%), Gaps = 64/290 (22%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP-PPFPAGQ 234
+ G M G+AGPPG + G P VPG G +G GP PP P G
Sbjct: 625 REGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGL 684
Query: 235 TPPRPPLGPPG------PPGPPGPP-PPGQVLPPPLAGPPN-RGDRPPPPVLFPGQPFGQ 286
R +G PG P GPPGP G+ P L G P RG P V PG
Sbjct: 685 QGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGLTGEPGMRG--LPGAVGEPGAKGAM 742
Query: 287 PPLGPL-------------------PPGPP--PPVPGYGPPPGPP--------PPQQGPP 317
P GP PPGP P PG P GP P +G P
Sbjct: 743 GPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGEP 802
Query: 318 PPPG-------------PFPPRPPGPLGPPLTLAPPPHLPGP--PPGAPPPAPHVNPAFF 362
PG P PP PPG +GPP PP PGP P G P +N
Sbjct: 803 GAPGKIVTSEGSSMLTVPGPPGPPGAMGPP----GPPGAPGPAGPAGLPGHQEVLNLQGP 858
Query: 363 P-PPTNSGMPTSDSRGPP-PTDPYGRPPPYDRGDYGPPGREMDTARTPLS 410
P PP G P GPP P P G P G GPPG + + T LS
Sbjct: 859 PGPPGPRGPPGPSIPGPPGPRGPPGEGLP---GPPGPPGSFLSNSETFLS 905
Score = 87.8 bits (216), Expect = 2e-17
Identities = 113/414 (27%), Positives = 129/414 (31%), Gaps = 160/414 (38%)
Query: 141 MDLLPKRELHGQNPVVTP------CNKQFLSQFEMQSRKTTQSGQMSGEGKAGP-PGGSS 193
MD + K L G P + + M RK Q +G + P P G
Sbjct: 516 MDRIEKDRLQGMAPAAGADLDKIGLHSDSQEELWMFVRKKLMMEQENGNLRGSPGPKGDM 575
Query: 194 RAAFPQGGRGRGRFPGAVPGGDRFPGPAGP-------GGPPPPFPAGQTPPRPPLGP--- 243
+ P+G RG PG +PG PGP GP G P P GQ P+GP
Sbjct: 576 GSPGPKGDRGFPGTPG-IPGPLGHPGPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGE 634
Query: 244 -----------------PGPPGPPGPP----PPGQVLPPPLAGPPN-------------- 268
PGP GPPG P P G P GPP
Sbjct: 635 AGPPGSGEKGERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLP 694
Query: 269 --RGDRPP--PP--------------------------VLFPGQPFGQPPLGP------- 291
+GD+ P PP V PG P GP
Sbjct: 695 GVKGDKGPMGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPR 754
Query: 292 ------------LPPGP--PPPVPGYGPPPGPP--------PPQQGPPPPPG-------- 321
PPGP P PG P GP P +G P PG
Sbjct: 755 GEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGEPGAPGKIVTSEGS 814
Query: 322 -----PFPPRPPGPLGPPLTLAPPPHLPGP-----------------PPGAPPPAPHVNP 359
P PP PPG +GPP PP PGP PPG P P P
Sbjct: 815 SMLTVPGPPGPPGAMGPP----GPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGP 870
Query: 360 AFFPPPTNSGMPTSDSRGPPP-------------TDPYGRP-PPYDRGDYGPPG 399
+ PP G P GPP + P G P PP +GD GPPG
Sbjct: 871 SIPGPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQGPPG 924
Score = 81.6 bits (200), Expect = 2e-15
Identities = 88/261 (33%), Positives = 97/261 (37%), Gaps = 105/261 (40%)
Query: 178 GQMSGEGKAGPPG------GSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGPGGPP-- 227
G+ +G+ G PG GSS P G PGA+ PG PGPAGP G P
Sbjct: 794 GRPGIKGEPGAPGKIVTSEGSSMLTVP----GPPGPPGAMGPPGPPGAPGPAGPAGLPGH 849
Query: 228 --------PPFPAG-QTPPRPPL-GPPGPPGPPG------PPPPGQVL---------PPP 262
PP P G + PP P + GPPGP GPPG P PPG L PP
Sbjct: 850 QEVLNLQGPPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPG 909
Query: 263 LAGPPN-RGDRPPPPVL-------FPG------QPFGQPPLGPL-PPGPPPP-------- 299
GPP +GD+ PP PG FG GP PPGP P
Sbjct: 910 PPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKGDPG 969
Query: 300 VPG-YGPPPGP-------------PPPQQGPPPPPGPF---------------------- 323
VPG G P GP PP GPP PPG
Sbjct: 970 VPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPPGSISSSGQEIQQYISEYMQSDSIRS 1029
Query: 324 -------PPRPPGPLGPPLTL 337
PP PPGP GP T+
Sbjct: 1030 YLSGVQGPPGPPGPPGPVTTI 1050
Score = 52.4 bits (124), Expect = 1e-06
Identities = 46/147 (31%), Positives = 53/147 (36%), Gaps = 31/147 (21%)
Query: 184 GKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPL 241
G GPPG G P+G +G PG G G G P PP P G P+
Sbjct: 909 GPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQG---PKGDK 965
Query: 242 GPPGPPG----PPGPPPPGQVLPPPLAGPPNRGDRPPPP--VLFPGQPFGQ--------- 286
G PG PG P GP G ++GPP P PP + GQ Q
Sbjct: 966 GDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPPGSISSSGQEIQQYISEYMQSD 1025
Query: 287 -----------PPLGPLPPGPPPPVPG 302
PP P PPGP + G
Sbjct: 1026 SIRSYLSGVQGPPGPPGPPGPVTTITG 1052
Score = 50.4 bits (119), Expect = 4e-06
Identities = 66/232 (28%), Positives = 83/232 (35%), Gaps = 48/232 (20%)
Query: 241 LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP--- 297
+GP GPPGPPG G +L A +R +L G P PPGPP
Sbjct: 1105 MGPRGPPGPPGASGDGSLLSLDYAELSSR-------ILSYMSSSGISIGLPGPPGPPGLP 1157
Query: 298 -------------PPVPGYGPPPGPPPPQQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHL 343
G PPGPP GPP PG + L L A +
Sbjct: 1158 GTSYEELLSLLRGSEFRGIVGPPGPP----GPPGIPGNVWSSISVEDLSSYLHTAGLSFI 1213
Query: 344 PGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDS--------RGPPPTDPYGRPPPYDRGDY 395
PGPP PP P P SDS P + PP G
Sbjct: 1214 PGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGPPGPPGPQ 1273
Query: 396 GPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIET 447
GPPG +R ++A + +R SSS+ S +V S+ Y S++ T
Sbjct: 1274 GPPG----DSRLLSTDA------SHSRGSSSSSHSSSVRRGSS--YSSSMST 1313
Score = 49.7 bits (117), Expect = 7e-06
Identities = 52/179 (29%), Positives = 58/179 (32%), Gaps = 71/179 (39%)
Query: 219 GPAGPGGPPPPFPAG-----------------QTPPRPPLGPPGPPGPPGPPPPG-QVLP 260
GP GP GPP G + +G PGPPGPPG P + L
Sbjct: 1106 GPRGPPGPPGASGDGSLLSLDYAELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELL 1165
Query: 261 PPLAGPPNRG----DRPPPPVLFPGQPFGQPPLGPLP-----------PGPPPPVPGYGP 305
L G RG PP P PG + + L PGPP
Sbjct: 1166 SLLRGSEFRGIVGPPGPPGPPGIPGNVWSSISVEDLSSYLHTAGLSFIPGPP-------G 1218
Query: 306 PPGPPPPQQGPPPPPGPF------------------------------PPRPPGPLGPP 334
PPGPP P +GPP G PP PPGP GPP
Sbjct: 1219 PPGPPGP-RGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGPPGPPGPQGPP 1276
Score = 40.0 bits (92), Expect = 0.006
Identities = 39/122 (31%), Positives = 42/122 (34%), Gaps = 33/122 (27%)
Query: 214 GDRFPGPAGPGGPP-PPFPAGQTPPRPPL----------------GPPGPPGPPGPPPPG 256
G F G GP GPP PP G + GPPGPPGPPGP
Sbjct: 1170 GSEFRGIVGPPGPPGPPGIPGNVWSSISVEDLSSYLHTAGLSFIPGPPGPPGPPGP---- 1225
Query: 257 QVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGY-GPPPGPPPPQQG 315
GPP F + L P V + PPGPP P QG
Sbjct: 1226 -------RGPPGVSGALATYAAENSDSFRSELISYL---TSPDVRSFIVGPPGPPGP-QG 1274
Query: 316 PP 317
PP
Sbjct: 1275 PP 1276
Score = 36.6 bits (83), Expect = 0.061
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 169 MQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGG-----DRFPGPAGP 223
MQ + Q + +G G PG PQG G + A D F
Sbjct: 1384 MQRQGLLQGMAYTVQGPPGQPG-------PQGPPGISKVFSAYSNVTADLMDFFQTYGAI 1436
Query: 224 GGPPPPFPAGQTP-PRPPLGPPGPPGPPGPPPP 255
GPP TP P+ GP GPPG PGPP P
Sbjct: 1437 QGPPGQKGEMGTPGPKGDRGPAGPPGHPGPPGP 1469
Score = 35.8 bits (81), Expect = 0.10
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 153 NPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSR-AAFPQGGRGRGRF---P 208
N + ++ Q +Q T G G GPPG S +A+ F
Sbjct: 1374 NELAVRVSESMQRQGLLQGMAYTVQGPPGQPGPQGPPGISKVFSAYSNVTADLMDFFQTY 1433
Query: 209 GAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPG 251
GA+ G PG G G P P G P P G PGPPGP G
Sbjct: 1434 GAIQGP---PGQKGEMGTPGP--KGDRGPAGPPGHPGPPGPRG 1471
Score = 35.4 bits (80), Expect = 0.14
Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 17/92 (18%)
Query: 242 GPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP 301
GPPG PGP GPP +V + ++ Q +G GPP
Sbjct: 1399 GPPGQPGPQGPPGISKVF--------SAYSNVTADLMDFFQTYGAIQ------GPPGQKG 1444
Query: 302 GYGPPPGPPPPQQGPPPPPG-PFPPRPPGPLG 332
G P P +GP PPG P PP P G G
Sbjct: 1445 EMGTPG--PKGDRGPAGPPGHPGPPGPRGHKG 1474
Score = 33.1 bits (74), Expect = 0.68
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 24/79 (30%)
Query: 218 PGPAGPGGPP--------------------PPFPAGQTPP--RPPLGPPGPPGPPGPP-P 254
PG GP GPP + A Q PP + +G PGP G GP P
Sbjct: 1401 PGQPGPQGPPGISKVFSAYSNVTADLMDFFQTYGAIQGPPGQKGEMGTPGPKGDRGPAGP 1460
Query: 255 PGQVLPP-PLAGPPNRGDR 272
PG PP P +GD+
Sbjct: 1461 PGHPGPPGPRGHKGEKGDK 1479
Score = 33.1 bits (74), Expect = 0.68
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 18/54 (33%)
Query: 198 PQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPG 251
P G +G PG P GDR GPAGP G P GPPGP G G
Sbjct: 1439 PPGQKGEMGTPG--PKGDR--GPAGPPGHP--------------GPPGPRGHKG 1474
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 105 bits (261), Expect = 1e-22
Identities = 89/265 (33%), Positives = 103/265 (38%), Gaps = 62/265 (23%)
Query: 189 PGGSSRAAFPQGGRGRG------RFPGAVPGGDRFPGPAGP--GGPPPPFPAGQT-PPRP 239
P G A + G+G G R P G P PA P G A +T PPRP
Sbjct: 111 PAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIP-PASPRLGNTSEAHGAARTAPPRP 169
Query: 240 PLGPPGPPGPPGPPPPGQVLPPPL----------AGPPNRGDRPPPPVLFPGQPFGQPPL 289
+ P PP PP PPPP LPPPL PP + PV+ P P PP
Sbjct: 170 NVPAPPPPTPPPPPPP---LPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPP 226
Query: 290 GPLPPGPPPPVPGYGP---------------PPGPPPPQQGPP--------PPPGPF--- 323
P PP PPP+P PP PPP PP P P
Sbjct: 227 PPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDA 286
Query: 324 --PPRPPGPLGPPLTLAPPPHLPGPP-PG------APPPAPHVNPAFFPPPTNSGMPTSD 374
PP PP PL P + +P LP PP PG PPP P +P+F PP +G
Sbjct: 287 QEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQAL- 345
Query: 375 SRGPPPTDPYGRPPPYDRGDYGPPG 399
P P P G P + +G PG
Sbjct: 346 ---PAPPAPPGSQPFLQKKRHGRPG 367
Score = 75.1 bits (183), Expect = 2e-13
Identities = 71/210 (33%), Positives = 77/210 (36%), Gaps = 47/210 (22%)
Query: 218 PGPAGPGGPP---PPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP 274
PGP G P PP P PP PP P PP PP + + P LA P + PP
Sbjct: 204 PGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLA-PLHLPPIPP 262
Query: 275 PPVLFPGQPFGQP-----PLGPL-----PPGPPPPVPGYG-------------------- 304
P L P P G P P P PP PPPP+P Y
Sbjct: 263 PLPLLP--PCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSS 320
Query: 305 --PPPGPP--PPQQGPPPPPGPFP-PRPPGPLGPPLTLAPPPH-LPGPPPGA--PPPAPH 356
PPP PP P Q PP G P PP P G L H PG G PPPAP
Sbjct: 321 ETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAP- 379
Query: 357 VNPAFFPPPTNSGMPTSDSRGPPPTDPYGR 386
PA P S + P P G+
Sbjct: 380 --PARSPTTELSSKSQQATAWTPTQQPGGQ 407
Score = 70.1 bits (170), Expect = 5e-12
Identities = 74/261 (28%), Positives = 81/261 (31%), Gaps = 100/261 (38%)
Query: 223 PGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNR------------- 269
P PPPP P PP PPLG P PP P PP A P R
Sbjct: 4 PPPPPPPLP----PPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRL 59
Query: 270 ------GDRPPPPV---------------------------LFPG-----QPFGQPPL-- 289
DR P + LF G +P GQ +
Sbjct: 60 RKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDVAG 119
Query: 290 -----GPLPPGPPPPVPG---YGP--PPGPP---------------PPQQGPPPPPGPFP 324
GP P P +P GP PP P PP+ P PP P P
Sbjct: 120 GKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTP 179
Query: 325 PRPPGPLGPPLTLAPP-----------------PHLPGPPPGAPPPAPHVNPAFFPPPTN 367
P PP PL PPL + P P + P P APPP P P PPP
Sbjct: 180 PPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPP-TPPPLP 238
Query: 368 SGMPTSDSRGPPPTDPYGRPP 388
SD P P PP
Sbjct: 239 PASVLSDKAVKPQLAPLHLPP 259
Score = 52.0 bits (123), Expect = 1e-06
Identities = 57/206 (27%), Positives = 60/206 (29%), Gaps = 61/206 (29%)
Query: 198 PQGGRGRGRFPGAVPGGDRFPGPAGPGGPP--PPFPAGQT-------------------P 236
P G +G P P P P P PP PP P P
Sbjct: 203 PPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPP 262
Query: 237 PRPPLGPPGPPG--------------PPGPPPPGQVLPP--------PLAGPP----NRG 270
P P L P G PG PP PPPP LPP L PP N
Sbjct: 263 PLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPP---LPPYASCSPRASLPAPPLPGVNSS 319
Query: 271 DRPPPPVLFPGQPFGQPPLG------PLPPGPPPPVP-----GYGPPPGPPPPQQGPPPP 319
PPP+ F PP P PP PP P +G P PP P
Sbjct: 320 SETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAP 379
Query: 320 PGPFPPRPPGPLGPPLTLAPPPHLPG 345
P P T P PG
Sbjct: 380 PARSPTTELSSKSQQATAWTPTQQPG 405
Score = 47.4 bits (111), Expect = 3e-05
Identities = 58/212 (27%), Positives = 65/212 (30%), Gaps = 77/212 (36%)
Query: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPL------- 289
P PP PP PP PP PPP G PPP + PP D L P G+ L
Sbjct: 2 PVPP--PPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSS---LRRADPKGRSALLADIQQG 56
Query: 290 ------GPLPPGPPPPV---PGYGPPPGPPPPQQGPPPPP-------GPFP--------- 324
+ P + G G +G PP G FP
Sbjct: 57 TRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRD 116
Query: 325 ----------------PRPP-----GPLGPPL---------------TLAPPPHLPGPPP 348
PR P GPL PP T P P++P PPP
Sbjct: 117 VAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPP 176
Query: 349 GAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
PPP P PPP S P PP
Sbjct: 177 PTPPPPPPP----LPPPLPSSSPIKTPLVSPP 204
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 292 LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 325
+P PPPP P P PPPP PPPPP PP
Sbjct: 1 MPVPPPPPPP----LPPPPPPLGAPPPPPPSAPP 30
Score = 33.5 bits (75), Expect = 0.52
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 341 PHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTS-DSRGPPPTDPYGR 386
P P PPP PPP P + PPP S P S D+ DP GR
Sbjct: 2 PVPPPPPPPLPPPPPPLGAP--PPPPPSAPPVSTDTSSLRRADPKGR 46
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 104 bits (260), Expect = 2e-22
Identities = 97/283 (34%), Positives = 109/283 (38%), Gaps = 59/283 (20%)
Query: 173 KTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-----AVPGGDRFP--------- 218
K G G+G AGPPG P G +G FPG PG D P
Sbjct: 929 KPGPKGNSGGDGPAGPPGERG----PNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGET 984
Query: 219 ---GPAGPGGPP----PPFPAGQTPPRPPLGPPGPPGPPGPP-------PPGQVLPPPLA 264
G GP GPP P P G+T P G PGPPGPPG G P A
Sbjct: 985 GFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPA 1044
Query: 265 GPPNRGDRPPPPVLFPGQPFGQPPLGPL-------PPGPPPPV--PGYGPPPGPP----- 310
G P + D PP FPG P+G L PPGPP P PG P G
Sbjct: 1045 GLPGK-DGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGI 1103
Query: 311 PPQQGPPPPPGPF----PPRPPGPLGPPLT--LAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
P + GP PPGP P GP GP L P LPGP PP +
Sbjct: 1104 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGE 1163
Query: 365 PTNSGMP-TSDSRGPP----PTDPYGRPPPYDR-GDYGPPGRE 401
P G +GPP P P G+P P G+ GP G++
Sbjct: 1164 PGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQ 1206
Score = 102 bits (253), Expect = 1e-21
Identities = 101/298 (33%), Positives = 114/298 (38%), Gaps = 74/298 (24%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP----PPFP 231
G EG GPPG GS P G G PG PG PGPAG G P P P
Sbjct: 1072 GLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGR-PGPQGPPGPAGEKGAPGEKGPQGP 1130
Query: 232 AGQTPPRPPLGPPGPPGPPGPP----PPGQVLPPPLAGPP-NRGDRPPPPVLFPGQPFGQ 286
AG+ + P+G PGP GP GPP G++ P G ++G++ PP P P GQ
Sbjct: 1131 AGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQ 1190
Query: 287 P-PLG----PLP------------------PGPPPPVPGYGPPPGPPPP--------QQG 315
P P G P P PGPP PV G PGPP Q G
Sbjct: 1191 PGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPV-GLQGLPGPPGEKGETGDVGQMG 1249
Query: 316 PPPPPGPFPPR----PPGPLGPPLTLAPPPHL-----------PGPPPGAPPPAPHVN-- 358
PP PPGP P GP GPP + P + PG P PP P
Sbjct: 1250 PPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERG 1309
Query: 359 -------PAFFPPPTNSGMPTSDS-RGPP-----PTDPYGRPPPYDRGDYGPPGREMD 403
PP G P D +G P P DP P G GPPG + D
Sbjct: 1310 EKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGD 1367
Score = 100 bits (250), Expect = 3e-21
Identities = 109/318 (34%), Positives = 121/318 (38%), Gaps = 93/318 (29%)
Query: 176 QSGQMSGEGKAGPPG-----------GSSRAAFPQGGRGR-GRFPGAVPGGDR-FPGPAG 222
Q G +G+ GPPG G S A G RG+ G F G R FPGP G
Sbjct: 1166 QKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPG 1225
Query: 223 PGG----PPPPFPAGQTPPRPPLGPPGPPGPPGP-----------PP------------- 254
P G P PP G+T +GPPGPPGP GP PP
Sbjct: 1226 PVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKG 1285
Query: 255 -PGQVLPPPL---AGPPN-RGDR-------------PPPPVLFPGQ--PFGQP-PLG--- 290
PG+ P L GPP +G+R PP P PG P G P P+G
Sbjct: 1286 EPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPG 1345
Query: 291 -PLPPGPPPPVPGYGPP----PGPPPPQQGPPPPPG-PFPPRPPGPLGPPLTLAP----- 339
P PPG P P GPP P Q G P P G P P PPG GPP P
Sbjct: 1346 DPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQG 1405
Query: 340 ------------PPHLPGP--PPGAP-PPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPY 384
PP GP P GAP P P P G+P S PP P
Sbjct: 1406 EKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPP-GPM 1464
Query: 385 GRPP-PYDRGDYGPPGRE 401
G P P +GD GP G +
Sbjct: 1465 GPPGLPGLKGDSGPKGEK 1482
Score = 100 bits (248), Expect = 5e-21
Identities = 90/254 (35%), Positives = 96/254 (37%), Gaps = 53/254 (20%)
Query: 173 KTTQSGQMSGEGKAGP--PGGSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGG 225
+T GQM G GP P G+ A PQG G PGAV PG PG G GG
Sbjct: 1241 ETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGG 1300
Query: 226 PPPPF----PAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281
PP P G++ P GPPGP GPPG P +G P PV FPG
Sbjct: 1301 PPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGP-------------KGS--PGPVGFPG 1345
Query: 282 QPFGQPPLGPLPPGPPPPVPGYGPPPGP----PPPQQGPPPPPG-PFPPRPPGPLGPPLT 336
P PPG P P GPP P Q G P P G P P PPG GPP
Sbjct: 1346 DPG--------PPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGP 1397
Query: 337 LAPPPH-----------LPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYG 385
P L GPP P P P P G+P P P
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGP 1457
Query: 386 RPPPYDRGDYGPPG 399
PP G GPPG
Sbjct: 1458 DGPP---GPMGPPG 1468
Score = 97.1 bits (240), Expect = 4e-20
Identities = 96/283 (33%), Positives = 111/283 (39%), Gaps = 75/283 (26%)
Query: 177 SGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPPPFPAGQT 235
+G+ G G G PG + P G RG R P + G PGP G GG P P G+
Sbjct: 894 NGEKGGRGTPGKPGPRGQRG-PTGPRGE-RGPRGITGK---PGPKGNSGGDGPAGPPGER 948
Query: 236 PPRPPLGPPGPPGPPGPP-PPGQVLPPPLAGPPNR----------GDRPPPPVLFPGQPF 284
P P GP G PGP GPP PPG+ L G P + G PP V+ P P
Sbjct: 949 GPNGPQGPTGFPGPKGPPGPPGK---DGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPT 1005
Query: 285 GQP-PLG----PLPPGPP--PPVPGYG--------PPPGPPPPQQGPP---------PPP 320
G+ P+G P PPGPP +PG P P P + GPP P
Sbjct: 1006 GETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLP 1065
Query: 321 GPF----------PPRPPGPLGPPLTLAP-----PPHLPGPPPGAPPPAPHVNPAFFPPP 365
GP PP PPGP G P P P +PG P PP P
Sbjct: 1066 GPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPG---------PA 1116
Query: 366 TNSGMP-TSDSRGPPPTD----PYGRPPPYDRGDYGPPGREMD 403
G P +GP D P G P P G GPPG + D
Sbjct: 1117 GEKGAPGEKGPQGPAGRDGLQGPVGLPGP--AGPVGPPGEDGD 1157
Score = 94.4 bits (233), Expect = 2e-19
Identities = 87/273 (31%), Positives = 99/273 (36%), Gaps = 73/273 (26%)
Query: 176 QSGQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP------ 227
+ G+ G AGPPG G P+G G FPG PG PGPAG GPP
Sbjct: 1310 EKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGD-PGPPGEPGPAGQDGPPGDKGDD 1368
Query: 228 -------PPFPAGQTPPRPPLGPPGPPGPPGPP----------------PPGQVLPPPLA 264
P P G+ P P G GPPGP GP PPG+ P
Sbjct: 1369 GEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQ 1428
Query: 265 GPPNRGDRP-----PPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP---------- 309
G P + P PV G P P GP P PP +PG GP
Sbjct: 1429 GAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLI 1488
Query: 310 ----PPPQQGP------PPPPGPFPPR-------PPGPLGPPLTLAPPPHLPGPP----- 347
PP +QG P P G P+ P GP+GPP PP LPGPP
Sbjct: 1489 GLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPP----GPPGLPGPPGPKGA 1544
Query: 348 PGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
G+ P A P P P + P P
Sbjct: 1545 KGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLP 1577
Score = 90.9 bits (224), Expect = 3e-18
Identities = 100/320 (31%), Positives = 108/320 (33%), Gaps = 109/320 (34%)
Query: 184 GKAGPPG-----GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP----------- 227
G GPPG G+ PQG GR G V PGPAGP GPP
Sbjct: 1108 GPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVG----LPGPAGPVGPPGEDGDKGEIGE 1163
Query: 228 -----------PPFPAGQTPPRPPLGPPGPP---GPPG-------------------PPP 254
P G T P+ P+G PGP G PG P P
Sbjct: 1164 PGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGP 1223
Query: 255 PGQVLPPPLAGPPNR-------GDRPPPPVLFPGQPFGQPPLGPLPPGPP---------- 297
PG V L GPP G PP P P G P P GPP
Sbjct: 1224 PGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADG-PQGPPGGIGNPGAVG 1282
Query: 298 ----------PPVPGYGPPPGP-----------PPPQQGPPPPPGP----FPPRPPGPLG 332
P +PG G PPGP P GPP P GP P PGP+G
Sbjct: 1283 EKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVG 1342
Query: 333 PPLTLAPPPHLPGP-----PPGAPPPAPHVNPAFFPPPTNSGMPTS--DSRGPP-PTDPY 384
P PP PGP PPG P PT P+ RGPP P P
Sbjct: 1343 FPGDPGPPGE-PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPE 1401
Query: 385 GRP----PPYDRGDYGPPGR 400
GR + G GPPG+
Sbjct: 1402 GRQGEKGAKGEAGLEGPPGK 1421
Score = 88.6 bits (218), Expect = 1e-17
Identities = 92/279 (32%), Positives = 107/279 (38%), Gaps = 61/279 (21%)
Query: 164 LSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGP 223
+S E Q++ Q +++ G AGP G + R P G G G G PG GP
Sbjct: 539 VSAQESQAQAILQQARLALRGPAGPMGLTGRPG-PVGPPGSGGLKGE-------PGDVGP 590
Query: 224 GGPP----PPFPAGQTPPRPPLGPPGPPGPPGPPPP----------------GQVLPPPL 263
GP PP PAG+ R G G G PG P G P
Sbjct: 591 QGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGP 650
Query: 264 AGPPN-------RGDRPPP-PVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQ-- 313
+GPP RGD P PG+P + LGP P PP PG G P P+
Sbjct: 651 SGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGN 710
Query: 314 ---QGPPPPPGPFP-------PRPPGPLGPPLTLAP--PPHLPGPPPGAPPPAPHVNPAF 361
QG P PPG P P G +GPP P P LPG P PP +P
Sbjct: 711 VGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPG---HPGK 767
Query: 362 FPPPTNSGMPTSDSRGPP-PTDPYGRPPPYDRGDYGPPG 399
PP G +GPP P P G P P RG G G
Sbjct: 768 EGPPGEKG-----GQGPPGPQGPIGYPGP--RGVKGADG 799
Score = 85.5 bits (210), Expect = 1e-16
Identities = 94/291 (32%), Positives = 107/291 (36%), Gaps = 69/291 (23%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFP--------QGGRGRGRFPGAVPGGDRFPGPAG-PGGP 226
+ G G GPPG + P QG +G FPG PG + G G PG P
Sbjct: 848 RGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPG-FPGANGEKGGRGTPGKP 906
Query: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPP----------PPGQVLPPPLAGP-----PNRGD 271
P G T PR GP G G PGP PPG+ P GP P
Sbjct: 907 GPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPP 966
Query: 272 RPPPPVLFPGQPFGQPPLG----PLPPGPPPPVPGYGPP-----------PGP--PPPQQ 314
PP PG P + G PPGPP V GP PGP PP +Q
Sbjct: 967 GPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQ 1026
Query: 315 GPPPPPG-------PFPPRPPGPLGPPLTLAPPPH--LPGP-----------PPGAPPPA 354
G P G P P PG GPP P LPGP PPG PP
Sbjct: 1027 GLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPG--PPG 1084
Query: 355 PHVNPAFFPPPTNSGMPTSDSRGPPPTDPYG----RPPPYDRGDYGPPGRE 401
P +P P +G P P P P G + P ++G GP GR+
Sbjct: 1085 PAGSPGERGPAGAAG-PIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRD 1134
Score = 82.0 bits (201), Expect = 1e-15
Identities = 75/205 (36%), Positives = 87/205 (42%), Gaps = 47/205 (22%)
Query: 174 TTQSGQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG-PGGPPP-- 228
T + G GK GPPG G +G +G G PG GP G PG P P
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGP-PGKTGPIGPQGAPGKPGPDG 1438
Query: 229 ----PFPAGQT--PPRP-PLGPPGPPGPPGPP-------PPGQVLPPPLAG---PPN--- 268
P P G+ P P P GPPGP GPPG P P G+ P L G PP
Sbjct: 1439 LRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQG 1498
Query: 269 -RGDRPPPPVLFPGQPFGQP----PLGPLPPGPPPPVPGYGPPPGP-----------PPP 312
+GDR P P G+ P GP+ P PP +PG PPGP P
Sbjct: 1499 EKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPG---PPGPKGAKGSSGPTGPKG 1555
Query: 313 QQGPPPPPGPFPPRPPGPLGPPLTL 337
+ G P PPGP P PPG + PL +
Sbjct: 1556 EAGHPGPPGP--PGPPGEVIQPLPI 1578
Score = 77.8 bits (190), Expect = 2e-14
Identities = 92/300 (30%), Positives = 104/300 (34%), Gaps = 80/300 (26%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPG-----AVPGGDRFPGPAGPGGPP----- 227
G+ G+G GP G P+G +G G G D FPG G G
Sbjct: 772 GEKGGQGPPGPQGPIGYPG-PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGE 830
Query: 228 --PPFPAGQTPPRPPLGPPGPPGPPGP--PP--PGQVLPPPLAGPPNRGDRPPPPVLFPG 281
PP P G+ P P G GP G PGP PP G++ P L G P R P + FPG
Sbjct: 831 IGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGR-QGPKGSIGFPG 889
Query: 282 QPFGQPPLGPL-PPGPPPPVPGYGP--------------PPGP-----------PPPQQG 315
P G PG P P GP PGP PP ++G
Sbjct: 890 FPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERG 949
Query: 316 PPPPPGPFP-PRPPGPLGPPLTLAPPPH--------------LPGPPPGAPPPAP----- 355
P P GP P P GP GPP P H PGPP P P
Sbjct: 950 PNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETG 1009
Query: 356 ----HVNPAFFPPPTNSGMP-------TSDSRGPPPTDPYGRPP-----PYDRGDYGPPG 399
+P PP G+P T GP PP P DRG GP G
Sbjct: 1010 PMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG 1069
Score = 71.6 bits (174), Expect = 2e-12
Identities = 94/318 (29%), Positives = 103/318 (32%), Gaps = 101/318 (31%)
Query: 178 GQMSGEGKAGPPG-----------GSSRAAFPQGGRGRGRFPG--AVPGGDRFPGPAGPG 224
G + +G+ GPPG G A P G +G PG +PG D PG G
Sbjct: 709 GNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKE 768
Query: 225 GPP-------PPFPAGQ---------------------------------------TPPR 238
GPP PP P G R
Sbjct: 769 GPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR 828
Query: 239 PPLGPPGPPGPPGPPPP----GQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG---- 290
+GPPGP G GP P G P GPP + P L PG P Q P G
Sbjct: 829 GEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGL-PGYPGRQGPKGSIGF 887
Query: 291 PLPPGPPPPVPGYGPPPGP-PPPQQGPPPPPGPFPPR-------------PPGPLGPPLT 336
P PG G G P P P Q+GP P G PR GP GPP
Sbjct: 888 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE 947
Query: 337 LAP-----PPHLPGP--PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPP-------PTD 382
P P PGP PPG PP P P GPP P
Sbjct: 948 RGPNGPQGPTGFPGPKGPPG--PPGKDGLPGH--PGQRGETGFQGKTGPPGPPGVVGPQG 1003
Query: 383 PYGRPPPY-DRGDYGPPG 399
P G P +RG GPPG
Sbjct: 1004 PTGETGPMGERGHPGPPG 1021
Score = 61.2 bits (147), Expect = 2e-09
Identities = 84/312 (26%), Positives = 96/312 (30%), Gaps = 118/312 (37%)
Query: 198 PQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPG------ 251
P+G +G+ P + G GP GP GP AG P +GP G G PG
Sbjct: 448 PRGEKGQKGEPAIIEPGMLIEGPPGPEGP-----AGLPGPPGTMGPTGQVGDPGERGPPG 502
Query: 252 ----------PPPPGQVLPPPL------------------------------------AG 265
P PPG +L P AG
Sbjct: 503 RPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAG 562
Query: 266 PPNRGDR-----PPPPVLFPGQPFGQPPLGPL----PPGPPPP--------------VPG 302
P R PP G+P P GP PPGP +PG
Sbjct: 563 PMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPG 622
Query: 303 YGPPPGP-----------------PPPQQGPPPPPGP----------FPPRPPGPLGPPL 335
P G P GPP PPG P PG GP
Sbjct: 623 QTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRG 682
Query: 336 TLAP--PPHLPGPP-----PGAPPPAPHVNPAFFP-PPTNSGMPTSDSRGPPPTDPYGRP 387
L P PP PGPP G P P +V P P PP G P + P P G
Sbjct: 683 LLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGL-PGPQGAIG-- 739
Query: 388 PPYDRGDYGPPG 399
PP ++G G PG
Sbjct: 740 PPGEKGPLGKPG 751
Score = 48.5 bits (114), Expect = 2e-05
Identities = 52/168 (30%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Query: 236 PPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPN-RGDRPPPPVLFPGQPFGQPPLGPLPP 294
P P P GP G P + + GP +G + P ++ PG PP GP P
Sbjct: 419 PYYDPTSSPSEIGP-GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPP-GPEGP 476
Query: 295 GPPPPVPGYGPPPGP--PPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
P PG P G P ++GPP PG P G GPP T+ P G A
Sbjct: 477 AGLPGPPGTMGPTGQVGDPGERGPPGRPGL--PGADGLPGPPGTMLMLPFRFGGGGDAGS 534
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRGPP-PTDPYGRPPPYDRGDYGPPG 399
P V+ RGP P GRP G GPPG
Sbjct: 535 KGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRP-----GPVGPPG 577
Score = 47.4 bits (111), Expect = 3e-05
Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV--PGGDRFPGPAGP----GGPPPP 229
+ G+ G GP G S P+G +G G + PG PGP GP G P
Sbjct: 1496 EQGEKGDRGLPGPQGSSG----PKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPT 1551
Query: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQ 257
P G+ P GPPGPPG P P Q
Sbjct: 1552 GPKGEAGHPGPPGPPGPPGEVIQPLPIQ 1579
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 103 bits (256), Expect = 5e-22
Identities = 94/253 (37%), Positives = 100/253 (39%), Gaps = 43/253 (16%)
Query: 184 GKAGPPG--GSSRAAFPQGGRGRGRFPG--AVPG---GDRFPGPAG----PGGPPPPFPA 232
G AGPPG G AA P G G PG +PG G PGP G PGGP
Sbjct: 696 GGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVP 755
Query: 233 GQTPPRPPLGPPGPPGPPGPP--------PPGQVLPPPLAGPPNRGDR-PPPPVLFPGQP 283
G+ PR P GP GPPGP G P P + P P RG+ PP P FPG P
Sbjct: 756 GKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAP 815
Query: 284 FGQPPLGPLPPGPPPPVPGYGPPPG--PPPPQQGPPPPPGP-------FPPRPPGPLGPP 334
G P G G PPG PP GP PPGP P PG G P
Sbjct: 816 GQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFP 875
Query: 335 LTLAPPPHLPGPP-----PGAPPPAPHVNPAFFPPP---TNSGMPTSDSRGPPPTDPYGR 386
LPGPP PG PP P +P PP N+G P S P D
Sbjct: 876 GARG----LPGPPGSNGNPG--PPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQP 929
Query: 387 PPPYDRGDYGPPG 399
G GPPG
Sbjct: 930 GEKGSPGAQGPPG 942
Score = 89.7 bits (221), Expect = 6e-18
Identities = 89/257 (34%), Positives = 99/257 (38%), Gaps = 48/257 (18%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQT 235
G +GK GPPG G S P G G P PG FPGP G G P
Sbjct: 543 GGPGSDGKPGPPGSQGESGRPGPPGPSG----PRGQPGVMGFPGPKGNDGAPGKNGERGG 598
Query: 236 PPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDR-PPPPVLFPGQP-FGQPPLGPLP 293
P P GP GPPG G P Q P P ++GD PP P G P G PP
Sbjct: 599 PGGP--GPQGPPGKNGETGP-QGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGK 655
Query: 294 PGPPPPVPGYGPPPGP-------PPPQQGPP------------PPPGP-------FPPRP 327
PG P P G P P P ++GPP PPGP PP P
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGP 715
Query: 328 PGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP-PPTDPYGR 386
PG G P +PG G P P + P G+P D GP PT P G
Sbjct: 716 PGAAGTPGLQG----MPGERGGLGSPGPKGDKGEPGGPGADGVPGKD--GPRGPTGPIGP 769
Query: 387 P----PPYDRGDYGPPG 399
P P D+G+ G PG
Sbjct: 770 PGPAGQPGDKGEGGAPG 786
Score = 88.6 bits (218), Expect = 1e-17
Identities = 93/278 (33%), Positives = 102/278 (36%), Gaps = 58/278 (20%)
Query: 176 QSGQMSGEGKAGPPGGSSRAA--FPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAG 233
+ G+ G AGPPGGS A PQG +G PG PG FPG G GPP G
Sbjct: 832 EKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGG-PGAAGFPGARGLPGPPGS--NG 888
Query: 234 QTPPRPPLGPPGPPGPPGPP-PPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
P P G PG GPPGP G P ++GP +GD P G P Q P P
Sbjct: 889 NPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP--KGDAGQPGE--KGSPGAQGP--PG 942
Query: 293 PPGP--------------PPPVPGYGPPPGPP--PPQQGPPPPPGPFPPR-PPGPLGPP- 334
PGP PP +PG PGP + G P G R PPGP G P
Sbjct: 943 APGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPG 1002
Query: 335 -LTLAPPPHLPGPP-----------------------PGAPPPAPHVNPAFFPPPTNSGM 370
A P G P PGAP H P P P
Sbjct: 1003 LAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGP---PGPVGPAG 1059
Query: 371 PTSDSRGPPPTDPYGRP-PPYDRGDYGPPGREMDTART 407
+ D P P G P P RG GP G D T
Sbjct: 1060 KSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGET 1097
Score = 87.4 bits (215), Expect = 3e-17
Identities = 91/274 (33%), Positives = 108/274 (39%), Gaps = 50/274 (18%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFP-----QGGRGRGRFPG-----AVPG--GDR----FPG 219
+ G+ +G+ GP G A P +G G+ PG +PG G+R F G
Sbjct: 433 EPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG 492
Query: 220 PAGPGG-PPPPFPAGQTPPRPPLGPPGPPGPPG----PPPPGQVLPPPLAGPPNRGDRPP 274
PAGP G P PAG+ P GP G G PG P PG P G P +P
Sbjct: 493 PAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPG 552
Query: 275 PPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPP---------------PGPPPPQQGPPPP 319
PP G+ P GP P P V G+ P PG P PQ GPP
Sbjct: 553 PPGS-QGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ-GPPGK 610
Query: 320 PGPFPPR-PPGPLGP----PLTLAPPPH-LPGPPPGAPPPAPHVNPAFFPPPTNSGMP-- 371
G P+ PPGP GP T P P L G P PP + P P ++G P
Sbjct: 611 NGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGA 670
Query: 372 ---TSDSRGPPPTDPYG-RPPPYDRGDYGPPGRE 401
D+ P P G P RG GPPG E
Sbjct: 671 PGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPE 704
Score = 84.0 bits (206), Expect = 3e-16
Identities = 80/232 (34%), Positives = 89/232 (38%), Gaps = 36/232 (15%)
Query: 178 GQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGP----AGPGGPPPPFPAG 233
G G+ GPPG S P+G G FPG G D PG GPGGP P P G
Sbjct: 555 GSQGESGRPGPPGPSG----PRGQPGVMGFPGP-KGNDGAPGKNGERGGPGGPGPQGPPG 609
Query: 234 QTPPRPPLGPPGPPGPPGPP----PPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPL 289
+ P GPPGP GP G PPG P L G P G PP PG+P
Sbjct: 610 KNGETGPQGPPGPTGPGGDKGDTGPPG---PQGLQGLPGTGG-PPGENGKPGEP------ 659
Query: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 349
GP P PG G P ++GPP G PG G A PP G
Sbjct: 660 GPKGDAGAPGAPG-GKGDAGAPGERGPPGLAGA-----PGLRGG----AGPPGPEGGKGA 709
Query: 350 APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRE 401
A PP P P P GMP P + P G G PG++
Sbjct: 710 AGPPGP---PGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKD 758
Score = 80.5 bits (197), Expect = 4e-15
Identities = 65/183 (35%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPF-PAGQTPPRPPLG 242
G+ G PGG +G RG PGA PG PGP GP GP G++ P P G
Sbjct: 1023 GRDGSPGG-------KGDRGENGSPGA-PGAPGHPGPPGPVGPAGKSGDRGESGPAGPAG 1074
Query: 243 PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVL----FPGQPFGQPPLGPLPP---- 294
PGP G G P P P G+R + FPG P GP
Sbjct: 1075 APGPAGSRGAPGP----QGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAI 1130
Query: 295 GPPPPVPGYGPP-PGPPPPQQGPPPPPGPF-PPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
G P P GP P PP + G PGP PP P G G + P H P P PP
Sbjct: 1131 GSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPP 1190
Query: 353 PAP 355
AP
Sbjct: 1191 GAP 1193
Score = 71.6 bits (174), Expect = 2e-12
Identities = 82/283 (28%), Positives = 97/283 (34%), Gaps = 64/283 (22%)
Query: 178 GQMSGEGKAGPPGGSSRAAFP--------------QGGRGRGRFPG-----AVPGGDRFP 218
G+ G GPPG A P G +G PG +PG + P
Sbjct: 237 GRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAP 296
Query: 219 GPAGPGGPP-----PPFPA-----GQTPPRPPLGPPGPPGPPG-------PPPPGQVLPP 261
GP GP G P P P G R G PGPPGPPG P G+V P
Sbjct: 297 GPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPA 356
Query: 262 PLAG----PPNRGDR----------PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPP 307
G P RG+ PP P G P G+ +GP P + G PP
Sbjct: 357 GSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPP 416
Query: 308 GPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP--PPHLPGPPPGAPPPAPHVNPAFFPPP 365
GP P G P G G P +PG P +P P
Sbjct: 417 GPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPG---EP 473
Query: 366 TNSGMP-TSDSRGPP----PTDPYGRP----PPYDRGDYGPPG 399
+G+P + RG P P P G P P +RG GP G
Sbjct: 474 GANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAG 516
Score = 71.2 bits (173), Expect = 2e-12
Identities = 98/314 (31%), Positives = 111/314 (35%), Gaps = 95/314 (30%)
Query: 178 GQMSGEGKAGPPG------GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPP-- 229
GQ G GPPG + PQ + AV G +PGPAGP GPP P
Sbjct: 127 GQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPG 186
Query: 230 ---------FPAGQTPPRPP-----LGPPGPPGPPGPP-PPGQVLPPPLAGPPNRGDRPP 274
P Q PP P GPPGPPG GP P G+ G P P
Sbjct: 187 TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPG 246
Query: 275 PPVL--------FPGQ--------------PFGQPPL---GPLP-----PGP--PPPVPG 302
PP + FPG G P L LP PGP P PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306
Query: 303 YGPPPGPP--------------PPQQGPPPPPGP--FPPRP-----PGPLGPPLTLAPPP 341
PG P Q GPP PPG FP P GP G P + P
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366
Query: 342 HL--PGP--------PPGAPPPAPHVNPAFFPPPTNSGMPTS----DSRGPP-PTDPYGR 386
PGP PPG PP + +P +G+P + +RGPP P G
Sbjct: 367 QRGEPGPQGHAGAQGPPG--PPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGA 424
Query: 387 PPPYDRGDYGPPGR 400
P RG G PG+
Sbjct: 425 PGL--RGGAGEPGK 436
Score = 70.5 bits (171), Expect = 4e-12
Identities = 72/223 (32%), Positives = 80/223 (35%), Gaps = 56/223 (25%)
Query: 218 PGPAGPGGP-----PPPFPAGQTPP--RPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRG 270
P P P G P P A PP + P GP G PGPPG PG+ P + G P
Sbjct: 75 PNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG--IPGRNGDPGIPGQPGSP 132
Query: 271 DRPPPPVLFPGQPFGQPPLGPL-----------------------PPGPPPPVPGYGPPP 307
P PP + P G P PPGPP P PG P
Sbjct: 133 GSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP-PGTSGHP 191
Query: 308 GPP--PPQQGPPPPPGPF----PPRPPGPLGP--PLTLAPPPHLPGPP--PGAPPPAPHV 357
G P P QGPP PG PP PPG +GP P PG P G P P
Sbjct: 192 GSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIK 251
Query: 358 NPAFFPP-PTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
PA P P G D R ++G+ G PG
Sbjct: 252 GPAGIPGFPGMKGHRGFDGRNG------------EKGETGAPG 282
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/147 (41%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 176 QSGQMSGEGKAGP-----PGGSSRAAFPQGGRG-RG----RFPGAVPGGDRFPGPAGPGG 225
+SG G AGP P GS A PQG RG +G R + G FPG PG
Sbjct: 1060 KSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPG--NPGA 1117
Query: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGP--PP--------PGQVLPPPLAGPPNRGDRPPP 275
P P PAGQ GP GP GP GP PP PG + PP G NRG+R
Sbjct: 1118 PGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRG--NRGERGSE 1175
Query: 276 PVLFPGQPFGQPPLGPLPPGPPPPVPG 302
PG P GQP P PPG P P G
Sbjct: 1176 G--SPGHP-GQPG-PPGPPGAPGPCCG 1198
Score = 35.4 bits (80), Expect = 0.14
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 176 QSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAG 233
+ G G GPPG P+G RG G+ PG PGP GP G P P G
Sbjct: 1150 KDGTSGHPGPIGPPG-------PRGNRGERGSEGS-PGHPGQPGPPGPPGAPGPCCGG 1199
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 103 bits (256), Expect = 5e-22
Identities = 89/242 (36%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAG---PPNRGDRPPPPVLFPGQ 282
PPP P Q PP P PP P PP PPP V+PP L PP PPPV+ P
Sbjct: 517 PPPFVPYSQMPPPLPTMPP-PVLPPSLPPP--VMPPALPATVPPPGM----PPPVMPPSL 569
Query: 283 PFGQPP---------LGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333
P PP GP P PPP + GPPP PPP PP P PL P
Sbjct: 570 PTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPP------PVMPL-P 622
Query: 334 PLTLAPPPHLPG-PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDR 392
PL+ A PP PG PPPG P P A PP +S + S+ P P P P
Sbjct: 623 PLSSATPP--PGIPPPGVPQGIPPQLTAAPVPPASS---SQSSQVPEKPRPALLPTPVSF 677
Query: 393 GDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAI--SRAVSDASAGDYGSAIETLVT 450
G P T PL A E +N +S SA+ S SD G+ +A +T
Sbjct: 678 GSAPP-----TTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPIT 732
Query: 451 AI 452
A+
Sbjct: 733 AV 734
Score = 79.3 bits (194), Expect = 8e-15
Identities = 59/192 (30%), Positives = 70/192 (36%), Gaps = 16/192 (8%)
Query: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL----PPPLAGPPNRGDRPPPPVLFPG 281
PPPP P P G PP PP PPPPG L R PP L P
Sbjct: 82 PPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPM 141
Query: 282 QPFGQPPLGPLPPGP-PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLT---L 337
+ P P+PPG PP Y PPP PPP P PP P P P + L
Sbjct: 142 ELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYL 201
Query: 338 APPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGP 397
AP P + H P++ P+ S+G + PPP P
Sbjct: 202 APTPSYSSSSSSSQSYLSHSQSYL---PSSQASPSRPSQGHSKSQLLAPPPP-----SAP 253
Query: 398 PGREMDTARTPL 409
PG + + PL
Sbjct: 254 PGNKTTVQQEPL 265
Score = 70.9 bits (172), Expect = 3e-12
Identities = 85/300 (28%), Positives = 115/300 (38%), Gaps = 57/300 (19%)
Query: 267 PNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPR 326
P D PP +P + P PPG P P G PPG PP R
Sbjct: 1483 PQMADHLPPQESRLQNTSSRPGMYP-PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTR 1541
Query: 327 PPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGM-PTSDSRG-------- 377
PP P+ PP PPP LP PPP P V + + G+ T+D +G
Sbjct: 1542 PPVPIPPP---PPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSE 1598
Query: 378 --PPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSD 435
P+ P PPP PPG + P+S+ + + V
Sbjct: 1599 TAAIPSAPVLPPPPV-HSSIPPPG-PVPMGMPPMSK--------------PPPVQQTV-- 1640
Query: 436 ASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRERSR 495
DYG + IS K ++ +R + L + E++ G R +R R
Sbjct: 1641 ----DYGHGRD-----ISTNKVEQIPYGERITLRPDPLPE-RSTFETEHAGQRDRYDRER 1690
Query: 496 ERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDR---DRERDR-EREYRHR 551
+R+ R+ S H D+ R+RE HRDRDRDR D +RDR +RE R R
Sbjct: 1691 DREPYFDRQ------SNVIADHRDF----KRDRETHRDRDRDRGVIDYDRDRFDRERRPR 1740
Score = 70.1 bits (170), Expect = 5e-12
Identities = 65/207 (31%), Positives = 74/207 (35%), Gaps = 33/207 (15%)
Query: 247 PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG-----------------------QP 283
P PP PPPP LP GP P G Q
Sbjct: 15 PPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQMQC 74
Query: 284 FGQPPLGPLPPGPPPPV---PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP 340
QP P PP PPPPV GYG PPPP PPPPGP L
Sbjct: 75 VLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPM---PPPPGPALSYQKQQQYKHQML--- 128
Query: 341 PHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGR 400
H PPG P P P P S MP S S PPP P PP Y PP
Sbjct: 129 HHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPA- 187
Query: 401 EMDTARTPLSEAEFEEIMNRNRAISSS 427
+ +++P S++ + + + SSS
Sbjct: 188 QPSPSQSPPSQSYLAPTPSYSSSSSSS 214
Score = 57.8 bits (138), Expect = 3e-08
Identities = 45/127 (35%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 223 PGGPPPPFPAGQTPPRPP-----LGPPGPPGPPG----PPPPGQVLPPPLAGPPNRGDRP 273
PG PP AG P PP GPP PP PPP LPP + P
Sbjct: 576 PGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSA------TP 629
Query: 274 PPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333
PP + PG P G PP L P PP P P+ P P F PP P
Sbjct: 630 PPGIPPPGVPQGIPP--QLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHP 687
Query: 334 PLTLAPP 340
PL A P
Sbjct: 688 PLQSAGP 694
Score = 55.5 bits (132), Expect = 1e-07
Identities = 47/156 (30%), Positives = 52/156 (33%), Gaps = 46/156 (29%)
Query: 229 PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAG-PPNRGDRPPPPVLFPGQPFGQP 287
P A PP+ P PPPG PPP G PP RP P P +P
Sbjct: 1483 PQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRP 1542
Query: 288 PLGPLPPGPPPPVPGYGPPPGPPPPQ-----------------------QG--------- 315
P+ PP PPPP+P PPP PQ QG
Sbjct: 1543 PVPIPPPPPPPPLP---PPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSET 1599
Query: 316 ----------PPPPPGPFPPRPPGPLGPPLTLAPPP 341
PPP PP P P+G P PPP
Sbjct: 1600 AAIPSAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPP 1635
Score = 52.0 bits (123), Expect = 1e-06
Identities = 52/177 (29%), Positives = 62/177 (35%), Gaps = 36/177 (20%)
Query: 161 KQFLSQFEMQSRKTTQSGQMSGEGKAG---PPGGSSRAAFPQGGRGRGRFPGAVPGGDRF 217
K F S+ +M Q ++ PP GS R P G + PG++
Sbjct: 1477 KDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMG-----KPPGSI------ 1525
Query: 218 PGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV 277
P PP T P P+ PP PP P PPPP + P A R D
Sbjct: 1526 ---VRPSAPPARSSVPVTRPPVPIPPPPPPPPL-PPPPPVIKPQTSAVEQERWDEDSFYG 1581
Query: 278 L------------FPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPP---PQQGPPPP 319
L F + P P PPPPV PPPGP P P PPP
Sbjct: 1582 LWDTNDEQGLNSEFKSETAAIP---SAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPP 1635
Score = 49.7 bits (117), Expect = 7e-06
Identities = 40/134 (29%), Positives = 44/134 (32%), Gaps = 41/134 (30%)
Query: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPP--------RPPLG-PPGPPGPPGPPPPGQV 258
PG P + P G PP PP RPP+ PP PP PP PPPP +
Sbjct: 1503 PGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVI 1562
Query: 259 LPPPLAGPPNRGDR--------------------------------PPPPVLFPGQPFGQ 286
P A R D PPPPV P G
Sbjct: 1563 KPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGP 1622
Query: 287 PPLGPLPPGPPPPV 300
P+G P PPPV
Sbjct: 1623 VPMGMPPMSKPPPV 1636
Score = 39.7 bits (91), Expect = 0.007
Identities = 68/295 (23%), Positives = 76/295 (25%), Gaps = 139/295 (47%)
Query: 218 PGPAGPGG-------PPPPFPAGQTPPRPPL------------------GPPG------- 245
P P PGG PPPP P PP P L GPPG
Sbjct: 88 PPPVMPGGGYGDWQPPPPPMPP---PPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELE 144
Query: 246 -----PPGPPGP--PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ--PP----LGPL 292
PP PPG PP +PPP P P L P QP PP L P
Sbjct: 145 SPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPT 204
Query: 293 PP------------------------GPPPPVPGYG-------PPPGPPP---------- 311
P P P G+ PPP PP
Sbjct: 205 PSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEP 264
Query: 312 ------------PQQGPPPPPGPFPPRP-------------------------------- 327
Q P P P P+
Sbjct: 265 LESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAK 324
Query: 328 --PGPLGPPLTLAPPPHLPGPP----PGAPPPAPHVNPAFFPPPTNSGMPTSDSR 376
P P+ +T+ +P P P PPP V P P S P D+R
Sbjct: 325 DTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDAR 379
Score = 35.4 bits (80), Expect = 0.14
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 329 GPLGPPLTLAPPPHLPGPPPGAPPPA--PHVNPAFFPPPTNSGMPTSDSRGP--PPTDPY 384
G + P P +P P P PPP P + P PP + +P P PP+ P
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPT 571
Query: 385 GRPPP 389
PPP
Sbjct: 572 SVPPP 576
Score = 30.8 bits (68), Expect = 3.4
Identities = 60/272 (22%), Positives = 81/272 (29%), Gaps = 61/272 (22%)
Query: 218 PGPAGPGGPPPPFPAGQTPP-------------RPPLGPPGPPGPPGPPPPGQVLPPPLA 264
P P P G PP A PP RP L P P G PP PP +
Sbjct: 634 PPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPT--PVSFGSAPPTTYHPPLQS 691
Query: 265 GPPNRGDRPPPPVLFPGQPFGQ------------PPLGPLPPGPPPPVPGYGPPPGPPPP 312
P+ P+ P+ P P+ PV G P PP
Sbjct: 692 AGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAVKDMPVRSGGLLPDPPRS 751
Query: 313 Q--QGPPPPPGPFP------------PRPPGP-LGPPLTLAPPPHLPGPP---------- 347
+ P P P PRP GP P P G P
Sbjct: 752 SYLESPRGPRFDGPRRFEDLGSRCEGPRPKGPRFEGNRPDGPRPRYEGHPAEGTKSKWGM 811
Query: 348 -PGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTAR 406
P P ++ P+ P SG +GP P +G+ P + +
Sbjct: 812 IPRGPASQFYITPSTSLSPRQSG---PQWKGPKPA--FGQQHQQQPKSQAEP---LSGNK 863
Query: 407 TPLSEAEFEEIMNRNRAISSSAISRAVSDASA 438
PL++ + N ++ +I+ V D A
Sbjct: 864 EPLADTSSNQQKNFKMQSAAFSIAADVKDVKA 895
Score = 30.0 bits (66), Expect = 5.7
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL 259
P+ P PPPP + PP P P G P PPP Q +
Sbjct: 1603 PSAPVLPPPPVHSSIPPPGPV--PMGMPPMSKPPPVQQTV 1640
Score = 29.6 bits (65), Expect = 7.5
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 217 FPGPAGPGGPPPPFPAGQTP-PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP 273
+ GP+ GG +P + P P P L PP P P + PP R RP
Sbjct: 1775 YEGPSMFGGERRTYPEERMPLPAPSLSHQPPPAPRVEKKPESKNVDDILKPPGRESRP 1832
Score = 29.3 bits (64), Expect = 9.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 497 RDHSRSREKSRRHKSRSRDRH-DDYYRERSRERERHRDRDRDRDRERDR 544
R+ S SR H R DD+ R++ + + +R+ +RD DR+ DR
Sbjct: 1244 REDRFSAPPSRSHDGDRRGPWWDDWERDQDMDEDYNREMERDMDRDVDR 1292
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 102 bits (255), Expect = 7e-22
Identities = 105/297 (35%), Positives = 120/297 (40%), Gaps = 77/297 (25%)
Query: 176 QSGQMSGEGKAGPPG--------GSSRAAF--PQGGRGRGRFPGAV-PGGDRFP-GPAGP 223
Q G G+G+ G PG G + F P+G RG G PGA+ P G++ P G G
Sbjct: 326 QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGI 385
Query: 224 GGPP--PPFPAGQTPPRPP--------------LGPPGPPGPPGPP-------------- 253
GGPP P P P PP +GP GPPGP G P
Sbjct: 386 GGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGE 445
Query: 254 --PPG-QVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG-PLPPGP-----PPPVPGYG 304
PPG + LP P+ G + P + PG P P G P PG PP +PG G
Sbjct: 446 VGPPGMRGLPGPIGPKGEAGQKGVPGL--PGVPGLLGPKGEPGIPGDQGLQGPPGIPGIG 503
Query: 305 PPPGP--PPPQQGPPPPPG-PFPPRPP-----------GPLGPPLTLAP--PPHLPGPP- 347
P GP PP GP PG P PP P GP G P L P P LPGPP
Sbjct: 504 GPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPG 563
Query: 348 PGAPPPAPHVNPAFFPPPTNSGMPTS--DSRGPPPTDPYGRPPPYDRGDYGPPGREM 402
P PP P V P PPP +P G P YG +G G P EM
Sbjct: 564 PPGPPGPPAVMPP-TPPPQGEYLPDMGLGIDGVKPPHAYGA----KKGKNGGPAYEM 615
Score = 95.9 bits (237), Expect = 9e-20
Identities = 94/247 (38%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGGPPPPF 230
GQ +G GP G G P+G +G G PGA PG PGP G G P
Sbjct: 217 GQPGPKGDRGPKGLPGPQGLRGPKGDKGFG-MPGAPGVKGPPGMHGPPGPVGLPGVGKPG 275
Query: 231 PAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPN-RGDRPPPPVLFPGQP-----F 284
G P+ PLG PG PG PGP P V P + GPP G P PGQP
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGV--PGVQGPPGIPGIGKPGQDGIPGQPGFPGGK 333
Query: 285 GQPPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPPGPFPPR-PPGPLGPPLTLAPP-- 340
G+ L LP PP +PG G P P P +G PG PR GP+G P PP
Sbjct: 334 GEQGLPGLP--GPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGE 391
Query: 341 PHLPG-PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP-------PPYDR 392
P LPG P P PP A FP P G +GPP P G P P
Sbjct: 392 PGLPGIPGPMGPPGA-----IGFPGPKGEG-GIVGPQGPP--GPKGEPGLQGFPGKPGFL 443
Query: 393 GDYGPPG 399
G+ GPPG
Sbjct: 444 GEVGPPG 450
Score = 86.7 bits (213), Expect = 5e-17
Identities = 80/240 (33%), Positives = 98/240 (40%), Gaps = 37/240 (15%)
Query: 184 GKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP-------PPFPAGQ 234
G+ GPPG G P+G G+ PG +PG GP G G P PP G
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPG-LPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Query: 235 TPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLP 293
P P+GPPG PGP G P PG P + P G PP P GQP L P P
Sbjct: 503 GGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGL-PGP 561
Query: 294 PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
PGPP P PGPP PPP G + P +G + PPH G G
Sbjct: 562 PGPPGP-------PGPPAVMPPTPPPQGEYLP----DMGLGIDGVKPPHAYGAKKGKNGG 610
Query: 354 APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAE 413
+ PAF T++ P P P G P +++ Y GR+ +T + E
Sbjct: 611 PAYEMPAF----------TAELTAPFP--PVGAPVKFNKLLYN--GRQNYNPQTGIFTCE 656
Score = 75.5 bits (184), Expect = 1e-13
Identities = 79/232 (34%), Positives = 93/232 (40%), Gaps = 44/232 (18%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFP-GPAGPGGPPPPFPAGQTPPRPPLGPPGP 246
P + A P+ G+ P A G++ P G GP GPP P P P G PG
Sbjct: 95 PAPRMGKEAVPKKGK---EIPLASLRGEQGPRGEPGPRGPPGP------PGLPGHGIPGI 145
Query: 247 PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ--PFGQP----PLG-PLPPGPPPP 299
G PGP V P + G P + P + PG GQ P+G P P GPP P
Sbjct: 146 KGKPGPQGYPGVGKPGMPGMPGK----PGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201
Query: 300 --VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPP-----HLPGPPPGAPP 352
+PG G P GP G P PGP R P L P L P +PG P P
Sbjct: 202 HGLPGIGKPGGP-----GLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGP 256
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRG----PPPTDPYGRP-PPYDRGDYGPPG 399
P H PP G+P G P P P G+P P + G GP G
Sbjct: 257 PGMH------GPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIG 302
Score = 32.7 bits (73), Expect = 0.89
Identities = 39/121 (32%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 281 GQPFGQPPLGP-LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP 339
G +G PL P +PP PP +P Y P Q P P G P L
Sbjct: 28 GAYYGIKPLPPQIPPQMPPQIPQY------QPLGQQVPHMPLAKDGLAMGKEMPHLQYGK 81
Query: 340 P-PHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
PHLP PAP + P +P + RG P G P P RG GPP
Sbjct: 82 EYPHLPQYMKEI-QPAPRMGKEAV-PKKGKEIPLASLRG--EQGPRGEPGP--RGPPGPP 135
Query: 399 G 399
G
Sbjct: 136 G 136
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 102 bits (255), Expect = 7e-22
Identities = 105/297 (35%), Positives = 120/297 (40%), Gaps = 77/297 (25%)
Query: 176 QSGQMSGEGKAGPPG--------GSSRAAF--PQGGRGRGRFPGAV-PGGDRFP-GPAGP 223
Q G G+G+ G PG G + F P+G RG G PGA+ P G++ P G G
Sbjct: 326 QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGI 385
Query: 224 GGPP--PPFPAGQTPPRPP--------------LGPPGPPGPPGPP-------------- 253
GGPP P P P PP +GP GPPGP G P
Sbjct: 386 GGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGE 445
Query: 254 --PPG-QVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG-PLPPGP-----PPPVPGYG 304
PPG + LP P+ G + P + PG P P G P PG PP +PG G
Sbjct: 446 VGPPGMRGLPGPIGPKGEAGQKGVPGL--PGVPGLLGPKGEPGIPGDQGLQGPPGIPGIG 503
Query: 305 PPPGP--PPPQQGPPPPPG-PFPPRPP-----------GPLGPPLTLAP--PPHLPGPP- 347
P GP PP GP PG P PP P GP G P L P P LPGPP
Sbjct: 504 GPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPG 563
Query: 348 PGAPPPAPHVNPAFFPPPTNSGMPTS--DSRGPPPTDPYGRPPPYDRGDYGPPGREM 402
P PP P V P PPP +P G P YG +G G P EM
Sbjct: 564 PPGPPGPPAVMPP-TPPPQGEYLPDMGLGIDGVKPPHAYGA----KKGKNGGPAYEM 615
Score = 95.9 bits (237), Expect = 9e-20
Identities = 94/247 (38%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 178 GQMSGEGKAGPPG--GSSRAAFPQGGRGRGRFPGAV-----PGGDRFPGPAGPGGPPPPF 230
GQ +G GP G G P+G +G G PGA PG PGP G G P
Sbjct: 217 GQPGPKGDRGPKGLPGPQGLRGPKGDKGFG-MPGAPGVKGPPGMHGPPGPVGLPGVGKPG 275
Query: 231 PAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPN-RGDRPPPPVLFPGQP-----F 284
G P+ PLG PG PG PGP P V P + GPP G P PGQP
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGV--PGVQGPPGIPGIGKPGQDGIPGQPGFPGGK 333
Query: 285 GQPPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPPGPFPPR-PPGPLGPPLTLAPP-- 340
G+ L LP PP +PG G P P P +G PG PR GP+G P PP
Sbjct: 334 GEQGLPGLP--GPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGE 391
Query: 341 PHLPG-PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP-------PPYDR 392
P LPG P P PP A FP P G +GPP P G P P
Sbjct: 392 PGLPGIPGPMGPPGA-----IGFPGPKGEG-GIVGPQGPP--GPKGEPGLQGFPGKPGFL 443
Query: 393 GDYGPPG 399
G+ GPPG
Sbjct: 444 GEVGPPG 450
Score = 86.7 bits (213), Expect = 5e-17
Identities = 80/240 (33%), Positives = 98/240 (40%), Gaps = 37/240 (15%)
Query: 184 GKAGPPG--GSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP-------PPFPAGQ 234
G+ GPPG G P+G G+ PG +PG GP G G P PP G
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPG-LPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Query: 235 TPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLP 293
P P+GPPG PGP G P PG P + P G PP P GQP L P P
Sbjct: 503 GGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGL-PGP 561
Query: 294 PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
PGPP P PGPP PPP G + P +G + PPH G G
Sbjct: 562 PGPPGP-------PGPPAVMPPTPPPQGEYLP----DMGLGIDGVKPPHAYGAKKGKNGG 610
Query: 354 APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAE 413
+ PAF T++ P P P G P +++ Y GR+ +T + E
Sbjct: 611 PAYEMPAF----------TAELTAPFP--PVGAPVKFNKLLYN--GRQNYNPQTGIFTCE 656
Score = 75.5 bits (184), Expect = 1e-13
Identities = 79/232 (34%), Positives = 93/232 (40%), Gaps = 44/232 (18%)
Query: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFP-GPAGPGGPPPPFPAGQTPPRPPLGPPGP 246
P + A P+ G+ P A G++ P G GP GPP P P P G PG
Sbjct: 95 PAPRMGKEAVPKKGK---EIPLASLRGEQGPRGEPGPRGPPGP------PGLPGHGIPGI 145
Query: 247 PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ--PFGQP----PLG-PLPPGPPPP 299
G PGP V P + G P + P + PG GQ P+G P P GPP P
Sbjct: 146 KGKPGPQGYPGVGKPGMPGMPGK----PGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201
Query: 300 --VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPP-----HLPGPPPGAPP 352
+PG G P GP G P PGP R P L P L P +PG P P
Sbjct: 202 HGLPGIGKPGGP-----GLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGP 256
Query: 353 PAPHVNPAFFPPPTNSGMPTSDSRG----PPPTDPYGRP-PPYDRGDYGPPG 399
P H PP G+P G P P P G+P P + G GP G
Sbjct: 257 PGMH------GPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIG 302
Score = 32.7 bits (73), Expect = 0.89
Identities = 39/121 (32%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 281 GQPFGQPPLGP-LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP 339
G +G PL P +PP PP +P Y P Q P P G P L
Sbjct: 28 GAYYGIKPLPPQIPPQMPPQIPQY------QPLGQQVPHMPLAKDGLAMGKEMPHLQYGK 81
Query: 340 P-PHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
PHLP PAP + P +P + RG P G P P RG GPP
Sbjct: 82 EYPHLPQYMKEI-QPAPRMGKEAV-PKKGKEIPLASLRG--EQGPRGEPGP--RGPPGPP 135
Query: 399 G 399
G
Sbjct: 136 G 136
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 102 bits (254), Expect = 9e-22
Identities = 91/271 (33%), Positives = 98/271 (36%), Gaps = 60/271 (22%)
Query: 180 MSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
M G G GP GG P P G P P GPPPP+ PP P
Sbjct: 382 MHGGGPGGPGGGPHSFPHP--------LPSLTGGHGGHPMQHNPNGPPPPW---MQPPPP 430
Query: 240 PLGP-PGPPGPPGPPPPGQVLPPPLAG--------------PPNRGDRPPPPVLFPGQPF 284
P+ P PPG GPPP Q L G PP G PPPP GQP
Sbjct: 431 PMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQP- 489
Query: 285 GQPPLGPLPPG-------PPPPVPGYGPPPGPPPPQQ------------GPPPP------ 319
PP GPLPP PPPP P P P Q G PP
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA 549
Query: 320 PGPFPPRPPGPLGPPLTLAPPPHLPGP-PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP 378
P P G P + PP + P PPGAPPP P PPP ++GM + P
Sbjct: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP------PPPGSAGMMYAPPPPP 603
Query: 379 -PPTDPYGRPPPYDRGDYGPPGREMDTARTP 408
PP DP G G P M A P
Sbjct: 604 PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP 634
Score = 92.4 bits (228), Expect = 9e-19
Identities = 72/213 (33%), Positives = 81/213 (38%), Gaps = 48/213 (22%)
Query: 188 PPGGSSRAAFPQGGRG---RGRFPGAVPGGDRF-----------PGPAGPGGPPPPFPAG 233
PP ++ P G G ++ G+ P G P P G PPPP P+G
Sbjct: 428 PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG 487
Query: 234 QTPPRPPLGPPGP-------PGPPGPPPPGQVLPPPLAGPPNR---------GDRPP--- 274
Q PP PP GP P P PP PP PL N G PP
Sbjct: 488 QPPP-PPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ 546
Query: 275 ---PPVLFPGQPF--GQPPLGPLPPGPPPPVPGYGPPPGPPPPQQG-------PPPPPGP 322
PG P G P + PLPPG PP+P PPP PPPP PPPPP P
Sbjct: 547 QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPP 606
Query: 323 FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAP 355
P + PP G PP PPP P
Sbjct: 607 MDPSNFVTMMGMGVAGMPPF--GMPPAPPPPPP 637
Score = 82.8 bits (203), Expect = 7e-16
Identities = 64/188 (34%), Positives = 73/188 (38%), Gaps = 23/188 (12%)
Query: 224 GGPPPPFPAGQT--PPRPPLGP-PGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280
G P P G T P PL P P P PPP ++ + PP P +
Sbjct: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
Query: 281 GQPFGQPP-LGPLPPGPPPPVP----GYGPPP------GPPPPQQGPPPPPGPFPPRPPG 329
G G P G P P P+P G+G P GPPPP PPPPP P PPG
Sbjct: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
Query: 330 PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
GPP +L P G+ H PPP MP PPP P G+PPP
Sbjct: 441 HHGPP---PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP------PPPPPPSGQPPP 491
Query: 390 YDRGDYGP 397
G P
Sbjct: 492 PPSGPLPP 499
Score = 82.0 bits (201), Expect = 1e-15
Identities = 74/226 (32%), Positives = 88/226 (38%), Gaps = 29/226 (12%)
Query: 193 SRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPL-----GPPGPP 247
SR + G R + GG GP GPGG P FP P P L G P
Sbjct: 364 SRPPWMNSGPSESRPYHGMHGG----GPGGPGGGPHSFPH----PLPSLTGGHGGHPMQH 415
Query: 248 GPPGPPPPGQVLPPPLAGPPNRGDRPP----PPVLFPGQPFGQPPLGPLPPGPPPPVPGY 303
P GPPPP PPP P N+G PP PP + Q G P+G G G
Sbjct: 416 NPNGPPPPWMQPPPP---PMNQGPHPPGHHGPPPM--DQYLGSTPVGS---GVYRLHQGK 467
Query: 304 GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFP 363
G P PPP PPPPP P PP P GP L P PP PPP+ + +
Sbjct: 468 GMMP-PPPMGMMPPPPPPPSGQPPPPPSGP---LPPWQQQQQQPPPPPPPSSSMASSTPL 523
Query: 364 PPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPL 409
P + T+ S G P+ + G P + + PL
Sbjct: 524 PWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPL 569
Score = 50.1 bits (118), Expect = 5e-06
Identities = 45/155 (29%), Positives = 57/155 (36%), Gaps = 24/155 (15%)
Query: 270 GDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPG 329
G+ P P + G G P PL P P P PPP P RPP
Sbjct: 321 GEAPVPASV--GSTSG-PATTPLASAPRPAAPANNPPP---------PSLMSTTQSRPPW 368
Query: 330 PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPT--NSGMPTSDS-RGPPPTDPYGR 386
P P + G PG P PH P P T + G P + GPPP P+ +
Sbjct: 369 MNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPP--PWMQ 426
Query: 387 PPP-------YDRGDYGPPGREMDTARTPLSEAEF 414
PPP + G +GPP + TP+ +
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVY 461
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 101 bits (252), Expect = 2e-21
Identities = 73/207 (35%), Positives = 80/207 (38%), Gaps = 25/207 (12%)
Query: 208 PGAVPGGDRFPGP-AGPGGPPPPFPAGQTPPRPPLGPPGPPGPPG-PPPPGQVLPPPLAG 265
P P P P A P PP +PP PL P P PP PP Q P P A
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPAS 639
Query: 266 PPNRGDRPPPP-------VLFPGQPFGQPPLGPL-----PPGPPPPVPGYGPPPGPP--- 310
PP P P V PF PP P+ PP PP P PP P
Sbjct: 640 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 699
Query: 311 --PPQQGPPPPPGPFPPRP---PGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPP 365
PP Q PP PP P P P P PP APP +P PP +PP +P P PP
Sbjct: 700 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
Query: 366 TNSGMPTSDSRGPP---PTDPYGRPPP 389
+ P PP P P +PPP
Sbjct: 760 LLAAPPLQVPPSPPASLPMSPLAKPPP 786
Score = 100 bits (249), Expect = 3e-21
Identities = 78/214 (36%), Positives = 84/214 (39%), Gaps = 34/214 (15%)
Query: 227 PPPFPAGQTPPRPPLGPPGPPG--PPG--PP----PPGQVLPPPLAGPPNRGDRPPPPVL 278
PPP P Q P PP PP P PP PP PP QV P P A PP PPP
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 279 FPGQPFGQPPLG--PLPPGPPPPVPGYGPPPGPPP-----PQQGPPPPPGPFPPRP---P 328
P P PPL P PP PP P PPP PP P Q PP PP P P P
Sbjct: 727 PP--PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKP 784
Query: 329 GPLGPPLTLAPP-PHLPGPPPGAPPPAPH-------VNPAFFPPPTNSGMPTSDSRGPPP 380
P PP PP LP PP P AP ++P PPP + + PP
Sbjct: 785 PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPP 844
Query: 381 TDPYG------RPPPYDRGDYGPPGREMDTARTP 408
+ P R PP D G + A P
Sbjct: 845 SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 878
Score = 94.7 bits (234), Expect = 2e-19
Identities = 76/235 (32%), Positives = 92/235 (39%), Gaps = 29/235 (12%)
Query: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPP 267
P A P P A P PP P P P PP PP PP QV P P A PP
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPP 746
Query: 268 NRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP----GYGPPPGPP----PPQQGPPPP 319
PPP + P PPL +PP PP +P PP PP PP Q P P
Sbjct: 747 MSPSATPPPRVPP--LLAAPPL-QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSP 803
Query: 320 PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPP 379
P FP + P L ++P L PPP APP P PP+ PT + P
Sbjct: 804 PASFPGQAPFSPSASLPMSP---LATPPPQAPPVL--AAPLLQVPPSPPASPTLQAPRRP 858
Query: 380 PTDPYGRPPPYDRGDYGP-------PGREMDTARTPLSEAEFEEIMNRNRAISSS 427
PT P D GP PG +R+P S ++ + + +S+
Sbjct: 859 PT------PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 907
Score = 94.4 bits (233), Expect = 2e-19
Identities = 70/220 (31%), Positives = 79/220 (35%), Gaps = 50/220 (22%)
Query: 220 PAGPGGPPPP-------FPAGQTPPRPPLGPP-GPPGPPGPPPPG----QVLPPPLAGPP 267
P P PPP P Q PP PP PP P P P P +L P + PP
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 669
Query: 268 NRGDRPP--PPVLFPGQPFGQPP-------------LGPLPPGPPPPVPGYGPPPGPPPP 312
+ + P PP P P PP + P PP PP P PPP PPP
Sbjct: 670 SPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 729
Query: 313 QQGPP------PPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
PP PP P P P P PPL APP +P PP + P +P P P
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAP 789
Query: 365 PTNSGMPTSDSRGPP---------------PTDPYGRPPP 389
P + P PP P P PPP
Sbjct: 790 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Score = 87.8 bits (216), Expect = 2e-17
Identities = 80/259 (30%), Positives = 88/259 (33%), Gaps = 39/259 (15%)
Query: 186 AGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPP-------FPAGQTPPR 238
A PP S Q P VP P P PPP P Q PP
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS 740
Query: 239 PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLP----- 293
PP PP P PP +PP LA PP + P PP P P +PP P
Sbjct: 741 PPASPPMSPSATPPPR----VPPLLAAPPLQVP-PSPPASLPMSPLAKPPPQAPPALATP 795
Query: 294 -----PGPPPPVPGYGP---------PPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP 339
P PP PG P P PP Q PP P PP P P AP
Sbjct: 796 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855
Query: 340 -PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPP----PTDPYGRPPPYDRGD 394
P PGP P + A PPP S P+S GP + P D
Sbjct: 856 RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 915
Query: 395 YGPPGREMDTARTPLSEAE 413
GP G A +P +AE
Sbjct: 916 SGPEG---GAAASPPPDAE 931
Score = 85.5 bits (210), Expect = 1e-16
Identities = 75/229 (32%), Positives = 84/229 (36%), Gaps = 20/229 (8%)
Query: 186 AGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPP-------FPAGQTPPR 238
A PP S PQ P VP P P PPP P Q PP
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 239 PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ-PFGQPPLGPLPPGPP 297
PP P P PPP PP LA PP + P PP FPGQ PF P LP P
Sbjct: 772 PPASLP--MSPLAKPPPQA--PPALATPPLQA-LPSPPASFPGQAPFS--PSASLPMSPL 824
Query: 298 PPVPGYGPPPGPPPPQQGPPPPPGP----FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
P PP P Q PP PP P RPP P GP +++ P PG PPP
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP-GPDTSVSGPRLTLALAPGPPPP 883
Query: 354 APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREM 402
+ P +G +S + P Y P PP E+
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 932
Score = 76.3 bits (186), Expect = 7e-14
Identities = 59/178 (33%), Positives = 65/178 (36%), Gaps = 26/178 (14%)
Query: 231 PAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLG 290
P+ QTPP PP P PPP Q PL P + PP P P Q P
Sbjct: 521 PSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTP--HLETPPCPAPCPLQAPPSPLTT 578
Query: 291 PLPPGP-----PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPG 345
P P P PPP PP PP QG P PP P P P PP PP P
Sbjct: 579 PPPETPSSIATPPP---QAPPALASPPLQGLPSPP-LSPLATPPPQAPPXLALPPLQAPP 634
Query: 346 PPPGAPPPAPHVNPA---------------FFPPPTNSGMPTSDSRGPPPTDPYGRPP 388
PP +PP +P P+ F PPP+ PP P PP
Sbjct: 635 SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 692
Score = 65.1 bits (157), Expect = 2e-10
Identities = 64/213 (30%), Positives = 74/213 (34%), Gaps = 43/213 (20%)
Query: 220 PAGPGGPPPPFPAGQTPPRPPLGPP---------GPPGPPGPPPPGQVLPP--------P 262
P+ P PP P Q P P PP P P P Q L P
Sbjct: 444 PSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAP 503
Query: 263 LAG---PP--NRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
L+ PP + PP + P PPL LP PPP+ P P + P
Sbjct: 504 LSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPC 563
Query: 318 PPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRG 377
P P P PP PL PPP P PP AP PA PP G+P+
Sbjct: 564 PAPCPL-QAPPSPL-----TTPPPETPSSIATPPPQAP---PALASPPL-QGLPS----- 608
Query: 378 PPPTDPYGRPPPYDRGDYGPPGREMDTARTPLS 410
PP P PPP PP + + P S
Sbjct: 609 -PPLSPLATPPP-----QAPPXLALPPLQAPPS 635
Score = 64.3 bits (155), Expect = 3e-10
Identities = 58/191 (30%), Positives = 70/191 (36%), Gaps = 22/191 (11%)
Query: 239 PPLGPPGPPGPPG-PPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP 297
PPL PP PP + PPL P+ PPP+ P P L P P
Sbjct: 510 PPLETQSSLAPPSLQTPPASLTTPPLENLPSLA---PPPLQTASAPLTTPHLET--PPCP 564
Query: 298 PPVPGYGPP-PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP--GPPPGAPPPA 354
P P PP P PP + P P P PP PPL P P L PP PP
Sbjct: 565 APCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPX 624
Query: 355 PHVNPAFFPPPTNSGMPTSDSRGPPP-----------TDPYGRPP-PYDRGDYGPPGR-E 401
+ P PP + P S P P P+ PP P + + PP
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 684
Query: 402 MDTARTPLSEA 412
+ + TP S+A
Sbjct: 685 VSPSATPPSQA 695
Score = 63.5 bits (153), Expect = 5e-10
Identities = 52/165 (31%), Positives = 63/165 (38%), Gaps = 11/165 (6%)
Query: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLF 279
P P P P P G RPP PP P G + PLA P G + P +
Sbjct: 263 PRAPAHPSQPKPKGLQALRPP--QVTPPRKDAAPALGPLSSSPLATPSPSGTKARP--VP 318
Query: 280 PGQPFGQPPLGPLPPGPP--PPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
P P LPP PP P+P P P PP Q P PP P + P + P
Sbjct: 319 PPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQ 378
Query: 338 APPPHLPGPPPGAPPPAPHVNPAFFPPPTN---SGMPTSDSRGPP 379
APP PP P +P+ PP+ S + + S G P
Sbjct: 379 APPSLQTIPPIQVPHSL--TSPSLQAPPSPLALSSLQATTSLGSP 421
Score = 58.5 bits (140), Expect = 2e-08
Identities = 56/193 (29%), Positives = 64/193 (33%), Gaps = 48/193 (24%)
Query: 207 FPGAVPGGDRFPGPAGPGGPPPP-------FPAGQTPPRPPLGP-------PGPPGP--- 249
FPG P P P PPP P Q PP PP P P PGP
Sbjct: 807 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 866
Query: 250 -----------PGPPPPGQVLP------PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPL 292
PGPPPP P P LAG + P + + + P G
Sbjct: 867 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEEL----RGYDSGPEGGA 922
Query: 293 PPGPPPPVP-------GYGPPPGPPPPQQGPPPPPGPFPPRP-PGPLGPPLTL--APPPH 342
PPP + P PP +G P P P+PP PG T+ P
Sbjct: 923 AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 982
Query: 343 LPGPPPGAPPPAP 355
P PGA P P
Sbjct: 983 SATPAPGALDPGP 995
Score = 55.1 bits (131), Expect = 2e-07
Identities = 51/171 (29%), Positives = 56/171 (32%), Gaps = 29/171 (16%)
Query: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLF 279
P+ GG P + PL P GP P P P PP V
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVT- 286
Query: 280 PGQPFGQPPLGPLPPGP-PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLA 338
P + P LGPL P P P PPP P P PP PP L PL LA
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP--LATPLPLA 344
Query: 339 PPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
PP P APP + T S PP P + PP
Sbjct: 345 PPS------PSAPP----------------SLQTLPS---PPATPPSQAPP 370
Score = 53.5 bits (127), Expect = 5e-07
Identities = 49/151 (32%), Positives = 53/151 (35%), Gaps = 20/151 (13%)
Query: 243 PPGPPGPPGPPPPG-QVLPPPLAGPPNRGDRPPPPVLFPGQPFGQP-PLGPLPPGPPPPV 300
P P P P P G Q L PP PP R D P P P P G PPP
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTPP-RKDAAPALGPLSSSPLATPSPSGTKARPVPPPD 321
Query: 301 PGYGPPPG---PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV 357
P P P PP P P P P PP +L P P PP PP+
Sbjct: 322 NAATPLPATLPPSPPLATPLPLAPPSPSAPP-------SLQTLPSPPATPPSQAPPSMTT 374
Query: 358 NPAFFPPPTNSGMP-------TSDSRGPPPT 381
P PP + P TS S PP+
Sbjct: 375 PPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS 405
Score = 51.6 bits (122), Expect = 2e-06
Identities = 72/277 (25%), Positives = 86/277 (31%), Gaps = 53/277 (19%)
Query: 178 GQMSGEGKAGP-PGGSSRAAFPQGGRGRGRFPGAVPGGDRF--PGPAGPGGPPPPFPAGQ 234
G +S A P P G+ P P +P P P P P P P+ Q
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP-PSLQ 355
Query: 235 TPPRPPLGPPGPPGPPG---PP---PPGQVLPPPLAGPPNRG----DRPPPPVLFP---- 280
T P PP PP PP PP PP PP+ P + PP P+
Sbjct: 356 TLPSPPATPP-SQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQA 414
Query: 281 ----GQPFGQPPLGPLPPGPPPPVPGYGPP--PGPPPPQQGPPPPPGPFPPRPP------ 328
G P Q L P P P PP P P P PP
Sbjct: 415 TTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLS 474
Query: 329 ---GPLGPPLTLAP-------PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP 378
PL PLT+ P H P P + P + PP+ P S + P
Sbjct: 475 PAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPP 534
Query: 379 PPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFE 415
P PPP + TA PL+ E
Sbjct: 535 LENLPSLAPPP------------LQTASAPLTTPHLE 559
Score = 44.7 bits (104), Expect = 2e-04
Identities = 62/241 (25%), Positives = 72/241 (29%), Gaps = 65/241 (26%)
Query: 232 AGQTPPR--PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG-----QPF 284
A +TP P L P PPG P PPPP + G R P G P
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 285 GQPPLGPL--------PPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRP-----PGPL 331
P GP P PP G G PP + P P P R PGPL
Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGE---RAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 332 G-----------------------PPLTLAPPPHLPGPPPGAPPPA-------------- 354
G L+ GP PG P PA
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL 189
Query: 355 PHVNPAFFPPPTNSG-----MPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPL 409
P P+ P P G S+ P+ R P G P R + ++ TPL
Sbjct: 190 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 249
Query: 410 S 410
S
Sbjct: 250 S 250
Score = 34.7 bits (78), Expect = 0.23
Identities = 31/102 (30%), Positives = 32/102 (31%), Gaps = 15/102 (14%)
Query: 208 PGAVPGGDRFPGPAGPGGPPPPFP-------AGQTPPRPPLGPPGPPGPPGPPPPGQVLP 260
P + G D P PPP A P PPL G PG P P PP
Sbjct: 908 PEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPP----- 962
Query: 261 PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPG 302
A P D G P G L PGP P G
Sbjct: 963 ---ATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG 1001
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,106,541
Number of Sequences: 37866
Number of extensions: 4516720
Number of successful extensions: 168060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 2079
Number of HSP's that attempted gapping in prelim test: 20670
Number of HSP's gapped (non-prelim): 40182
length of query: 551
length of database: 18,247,518
effective HSP length: 107
effective length of query: 444
effective length of database: 14,195,856
effective search space: 6302960064
effective search space used: 6302960064
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.