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Search of human proteins with 160358850
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|160358850 zona pellucida glycoprotein 3 isoform 1 precursor
[Homo sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|160358850 zona pellucida glycoprotein 3 isoform 1 precursor [... 873 0.0
gi|38327649 zona pellucida glycoprotein 3 isoform 2 [Homo sapiens] 766 0.0
gi|111160500 POMZP3 fusion protein isoform 1 [Homo sapiens] 229 4e-60
gi|23510406 POMZP3 fusion protein isoform 2 [Homo sapiens] 85 1e-16
gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo sap... 54 4e-07
gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens] 52 1e-06
gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens] 50 5e-06
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa... 48 2e-05
gi|66348148 zona pellucida glycoprotein 1 [Homo sapiens] 45 1e-04
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 44 3e-04
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 44 3e-04
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 44 3e-04
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 44 3e-04
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 44 3e-04
gi|134268640 tectorin alpha precursor [Homo sapiens] 42 0.001
gi|239756356 PREDICTED: similar to hCG1731366 [Homo sapiens] 39 0.012
gi|169209261 PREDICTED: similar to hCG1731366 [Homo sapiens] 39 0.012
gi|239745242 PREDICTED: similar to COMM domain containing 4 [Hom... 39 0.012
gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2 [... 38 0.020
gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1 [... 38 0.020
gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4 [... 38 0.020
gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3 [... 38 0.020
gi|195976821 dysferlin isoform 2 [Homo sapiens] 30 4.1
gi|4503431 dysferlin isoform 8 [Homo sapiens] 30 4.1
gi|195976779 dysferlin isoform 1 [Homo sapiens] 30 4.1
gi|195976777 dysferlin isoform 3 [Homo sapiens] 30 4.1
gi|195976775 dysferlin isoform 4 [Homo sapiens] 30 4.1
gi|195976773 dysferlin isoform 5 [Homo sapiens] 30 4.1
gi|195976769 dysferlin isoform 6 [Homo sapiens] 30 4.1
gi|195976766 dysferlin isoform 7 [Homo sapiens] 30 4.1
>gi|160358850 zona pellucida glycoprotein 3 isoform 1 precursor
[Homo sapiens]
Length = 424
Score = 873 bits (2256), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MELSYRLFICLLLWGSTELCYPQPLWLLQGGASHPETSVQPVLVECQEATLMVMVSKDLF 60
MELSYRLFICLLLWGSTELCYPQPLWLLQGGASHPETSVQPVLVECQEATLMVMVSKDLF
Sbjct: 1 MELSYRLFICLLLWGSTELCYPQPLWLLQGGASHPETSVQPVLVECQEATLMVMVSKDLF 60
Query: 61 GTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDP 120
GTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDP
Sbjct: 61 GTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDP 120
Query: 121 RPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLTFSLRLMEEN 180
RPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLTFSLRLMEEN
Sbjct: 121 RPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLTFSLRLMEEN 180
Query: 181 WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCL 240
WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCL
Sbjct: 181 WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCL 240
Query: 241 VDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
VDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC
Sbjct: 241 VDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
Query: 301 SFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNRRHVTEEADV 360
SFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNRRHVTEEADV
Sbjct: 301 SFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNRRHVTEEADV 360
Query: 361 TVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTRRCRTASHPV 420
TVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTRRCRTASHPV
Sbjct: 361 TVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTRRCRTASHPV 420
Query: 421 SASE 424
SASE
Sbjct: 421 SASE 424
>gi|38327649 zona pellucida glycoprotein 3 isoform 2 [Homo sapiens]
Length = 373
Score = 766 bits (1979), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 52 MVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALV 111
MVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALV
Sbjct: 1 MVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALV 60
Query: 112 YSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLT 171
YSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLT
Sbjct: 61 YSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLT 120
Query: 172 FSLRLMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYH 231
FSLRLMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYH
Sbjct: 121 FSLRLMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYH 180
Query: 232 TIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQ 291
TIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQ
Sbjct: 181 TIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQ 240
Query: 292 DPDELNKACSFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNR 351
DPDELNKACSFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNR
Sbjct: 241 DPDELNKACSFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNR 300
Query: 352 RHVTEEADVTVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTR 411
RHVTEEADVTVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTR
Sbjct: 301 RHVTEEADVTVGPLIFLDRRGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTR 360
Query: 412 RCRTASHPVSASE 424
RCRTASHPVSASE
Sbjct: 361 RCRTASHPVSASE 373
>gi|111160500 POMZP3 fusion protein isoform 1 [Homo sapiens]
Length = 187
Score = 229 bits (584), Expect = 4e-60
Identities = 106/110 (96%), Positives = 107/110 (97%)
Query: 239 CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNK 298
CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNK
Sbjct: 77 CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNK 136
Query: 299 ACSFSKPSNSWFPVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSAS 348
ACSFSKPSNSWFPVEG ADICQCCNKGDCGTPSHSRRQP V+SQWS SAS
Sbjct: 137 ACSFSKPSNSWFPVEGLADICQCCNKGDCGTPSHSRRQPRVVSQWSTSAS 186
>gi|23510406 POMZP3 fusion protein isoform 2 [Homo sapiens]
Length = 115
Score = 84.7 bits (208), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Query: 239 CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNM 277
CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNM
Sbjct: 77 CLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNM 115
>gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo
sapiens]
Length = 745
Score = 53.5 bits (127), Expect = 4e-07
Identities = 62/300 (20%), Positives = 125/300 (41%), Gaps = 34/300 (11%)
Query: 35 PETSVQPVLVECQEATLMVMVSKDL-------------FGTGKLIRAADLTLGPEACEPL 81
PET + EC + + +V+ +L + T + L +G +C+P+
Sbjct: 347 PETVSMVIYPECLCESPVSIVTGELCTQDGFMDVEVYSYQTQPALDLGTLRVGNSSCQPV 406
Query: 82 VSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFL--LHDPRPVGNLSIVRTNRAEIPIE 139
++ +VRF + L+ CG + DD +VY + L P +S R + + ++
Sbjct: 407 FEAQSQGLVRFHIPLNGCGTRYKFEDDKVVYENEIHALWTDFPPSKIS--RDSEFRMTVK 464
Query: 140 CRYPRQG---NVSSQAILPTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTFHLGDAA 196
C Y R N++ +++ P + F+ ++ ++ + + L
Sbjct: 465 CSYSRNDMLLNINVESLTPPVASVKLGPFTLILQSYPDNSYQQPYGENEYPLVRFLRQPI 524
Query: 197 HLQAEIHTGSHVPLRLFVDHCVATPTPDQNASP-YHTIVDFHGCLVDGLTDASSAFKVPR 255
+++ + ++L +D C AT T D ++ P ++ +VD GC D L + + F
Sbjct: 525 YMEVRVLNRDDPNIKLVLDDCWATSTMDPDSFPQWNVVVD--GCAYD-LDNYQTTFHPVG 581
Query: 256 PG---PDTLQ-FTVDVFHFANDSR---NMIYITCHLKVTLAEQDPDELNKACSFSKPSNS 308
PD Q F + F F +++ +++Y C + PD + CS + P +S
Sbjct: 582 SSVTHPDHYQRFDMKAFAFVSEAHVLSSLVYFHCSALI-CNRLSPD--SPLCSVTCPVSS 638
>gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens]
Length = 545
Score = 51.6 bits (122), Expect = 1e-06
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 42 VLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHECGN 101
V V C+ + V + ++L G +L L +C VS T + F L CG
Sbjct: 264 VPVLCKSNAIEVNIPRELVG------GLELFLTNTSCRG-VSNGTHVNILFS--LKTCGT 314
Query: 102 SMQVTDDALVYSTFLLHDPRPVGNLS---IVRTNRAEIPIECRYPRQGNVSSQAILPTWL 158
+ V +D +V S + P+ S I+RT++ IP+ C +PR + S+ +P
Sbjct: 315 VVDVVNDKIVASNLVTGLPKQTPGSSGDFIIRTSKLLIPVTCEFPRLYTI-SEGYVPNLR 373
Query: 159 PFRTTVFSEEK--LTFSLRLMEENWNAE---KRSPTFHLGDAAHLQAE--IHTGSHVPLR 211
+ S F+L + ++N E + PT L D+ + E +H L
Sbjct: 374 NSPLEIMSRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPVVHVSG---LE 430
Query: 212 LFVDHCVATPTPD-QNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHF 270
V+ C ATPT Y+ I D GC+ D S + F V VF F
Sbjct: 431 SLVESCFATPTSKIDEVLKYYLIRD--GCVSD-----DSVKQYTSRDHLAKHFQVPVFKF 483
Query: 271 ANDSRNMIYITCHLKV 286
+++ C + V
Sbjct: 484 VGKDHKEVFLHCRVLV 499
>gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens]
Length = 607
Score = 49.7 bits (117), Expect = 5e-06
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
++ + C + V++SK +L L C P +S +VV F V L+
Sbjct: 269 NINTTSLTCSSDRMRVIISKSYLEAFNS-NGNNLQLKDPTCRPKLS----NVVEFSVPLN 323
Query: 98 ECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTW 157
CG +V D ++ Y+ + + I R + +I ++C G+ S+ I+ +
Sbjct: 324 GCGTIRKVEDQSITYTNIITFSASSTSEV-ITRQKQLQIIVKCE---MGHNSTVEII--Y 377
Query: 158 LPFRTTVFSEE---KLTFSLRLMEENWNAEK---RSPTF-HLGDAAHLQAEIHTGSHVPL 210
+ + S+ K S+ L E N + EK SP + L +Q +HT S L
Sbjct: 378 ITEDDVIQSQNALGKYNTSMALFESN-SFEKTILESPYYVDLNQTLFVQVSLHT-SDPNL 435
Query: 211 RLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHF 270
+F+D C A+PT D ASP + ++ GC D F +F + F F
Sbjct: 436 VVFLDTCRASPTSD-FASPTYDLIK-SGCSRDETCKVYPLF------GHYGRFQFNAFKF 487
Query: 271 ANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
S + +Y+ C + + + N+ C
Sbjct: 488 LR-SMSSVYLQCKVLICDSSDHQSRCNQGC 516
>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
sapiens]
Length = 540
Score = 47.8 bits (112), Expect = 2e-05
Identities = 61/273 (22%), Positives = 104/273 (38%), Gaps = 25/273 (9%)
Query: 42 VLVEC-QEATLMVMVSKDLFGTGKLIRAADLTL-GPEACEPLVSMDTEDVVRFEVGLHEC 99
V + C +E + VS+++ L+ + L L AC P+ M T+ V F+ C
Sbjct: 185 VTLHCTREGHFSIAVSRNVTSPPLLLDSVRLALRNDSACNPV--MATQAFVLFQFPFTSC 242
Query: 100 GNSMQVTDDALVYSTFLL--HDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTW 157
G + Q+T D VY L+ D + S+ R + + + C Y N +
Sbjct: 243 GTTRQITGDRAVYENELVATRDVKNGSRGSVTRDSIFRLHVSCSYSVSSNSLPINVQVFT 302
Query: 158 LPFRTTVFSEEKLTFSLRLMEEN-----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRL 212
LP LT L++ ++ + L D +++ I + L L
Sbjct: 303 LPPPFPETQPGPLTLELQIAKDKNYGSYYGVGDYPVVKLLRDPIYVEVSILHRTDPYLGL 362
Query: 213 FVDHCVATPTPDQNASPYHTIVDFHGCLVDG------LTDASSAFKVPRPGPDTLQFTVD 266
+ C ATP+ D + P I+ GC G L A +P P +F++
Sbjct: 363 LLQQCWATPSTDPLSQPQWPIL-VKGCPYIGDNYQTQLIPVQKALDLPFPSHHQ-RFSIF 420
Query: 267 VFHFANDS------RNMIYITCHLKVTLAEQDP 293
F F N + R +++ C + V + P
Sbjct: 421 TFSFVNPTVEKQALRGPVHLHCSVSVCQPAETP 453
>gi|66348148 zona pellucida glycoprotein 1 [Homo sapiens]
Length = 638
Score = 45.1 bits (105), Expect = 1e-04
Identities = 70/301 (23%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 10 CLLLWGSTELCYPQPLWLLQGGASHPETSVQP------VLVEC-QEATLMVMVSKDLFGT 62
C++ S E C Q G + T P V+C ++ +++VS+++ T
Sbjct: 245 CIVRRTSKEACQ-------QAGCCYDNTREVPCYYGNTATVQCFRDGYFVLVVSQEMALT 297
Query: 63 GKLIRA-ADLTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLH--- 118
++ A L P +C P + TE V F L CG +MQV D L+Y +L+
Sbjct: 298 HRITLANIHLAYAPTSCSP--TQHTEAFVVFYFPLTHCGTTMQVAGDQLIYENWLVSGIH 355
Query: 119 -DPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQA-ILPTWLPFRTTVFSEEKLTFSLRL 176
P G SI R + ++ + C + + QA I P P + L LR+
Sbjct: 356 IQKGPQG--SITRDSTFQLHVRCVFNASDFLPIQASIFPP--PSPAPMTQPGPLRLELRI 411
Query: 177 MEE----NWNAEKRSPTFH-LGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYH 231
++ ++ E P L + H++ + + L L + C P+ + P
Sbjct: 412 AKDETFSSYYGEDDYPIVRLLREPVHVEVRLLQRTDPNLVLLLHQCWGAPSANPFQQPQW 471
Query: 232 TIVDFHGCLVDGLTDASSAFKVPRPGPDTLQ-----FTVDVFHFANDS-----RNMIYIT 281
I+ GC G D+ V G Q FTV F + R ++Y+
Sbjct: 472 PILS-DGCPFKG--DSYRTQMVALDGATPFQSHYQRFTVATFALLDSGSQRALRGLVYLF 528
Query: 282 C 282
C
Sbjct: 529 C 529
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 68 AADLTL----GPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPV 123
A+DL + G C P + T ++V F + CG Q +D + YS FL V
Sbjct: 1397 ASDLVISTWNGYYECRPQI---TPNLVIFTIPYSGCGTFKQADNDTIDYSNFL---TAAV 1450
Query: 124 GNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKL---TFSLRLMEEN 180
I R I + CR + V + I + E++ F + +
Sbjct: 1451 SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQVEEVQYGNFDVNISFYT 1510
Query: 181 -----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVD 235
+ R L ++QAEI S L LFVD CVA+P + S + ++
Sbjct: 1511 SSSFLYPVTSRPYYVDLNQDLYVQAEI-LHSDAVLTLFVDTCVASPYSNDFTSLTYDLIR 1569
Query: 236 FHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDE 295
GC+ D S+ P +F FHF N + +Y+ C + V A
Sbjct: 1570 -SGCVRDDTYGPYSS-----PSLRIARFRFRAFHFLNRFPS-VYLRCKMVVCRAYDPSSR 1622
Query: 296 LNKAC 300
+ C
Sbjct: 1623 CYRGC 1627
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 68 AADLTL----GPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPV 123
A+DL + G C P + T ++V F + CG Q +D + YS FL V
Sbjct: 1523 ASDLVISTWNGYYECRPQI---TPNLVIFTIPYSGCGTFKQADNDTIDYSNFL---TAAV 1576
Query: 124 GNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKL---TFSLRLMEEN 180
I R I + CR + V + I + E++ F + +
Sbjct: 1577 SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQVEEVQYGNFDVNISFYT 1636
Query: 181 -----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVD 235
+ R L ++QAEI S L LFVD CVA+P + S + ++
Sbjct: 1637 SSSFLYPVTSRPYYVDLNQDLYVQAEI-LHSDAVLTLFVDTCVASPYSNDFTSLTYDLIR 1695
Query: 236 FHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDE 295
GC+ D S+ P +F FHF N + +Y+ C + V A
Sbjct: 1696 -SGCVRDDTYGPYSS-----PSLRIARFRFRAFHFLNRFPS-VYLRCKMVVCRAYDPSSR 1748
Query: 296 LNKAC 300
+ C
Sbjct: 1749 CYRGC 1753
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 68 AADLTL----GPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPV 123
A+DL + G C P + T ++V F + CG Q +D + YS FL V
Sbjct: 2138 ASDLVISTWNGYYECRPQI---TPNLVIFTIPYSGCGTFKQADNDTIDYSNFL---TAAV 2191
Query: 124 GNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKL---TFSLRLMEEN 180
I R I + CR + V + I + E++ F + +
Sbjct: 2192 SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQVEEVQYGNFDVNISFYT 2251
Query: 181 -----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVD 235
+ R L ++QAEI S L LFVD CVA+P + S + ++
Sbjct: 2252 SSSFLYPVTSRPYYVDLNQDLYVQAEI-LHSDAVLTLFVDTCVASPYSNDFTSLTYDLIR 2310
Query: 236 FHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDE 295
GC+ D S+ P +F FHF N + +Y+ C + V A
Sbjct: 2311 -SGCVRDDTYGPYSS-----PSLRIARFRFRAFHFLNRFPS-VYLRCKMVVCRAYDPSSR 2363
Query: 296 LNKAC 300
+ C
Sbjct: 2364 CYRGC 2368
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 68 AADLTL----GPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPV 123
A+DL + G C P + T ++V F + CG Q +D + YS FL V
Sbjct: 2148 ASDLVISTWNGYYECRPQI---TPNLVIFTIPYSGCGTFKQADNDTIDYSNFL---TAAV 2201
Query: 124 GNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKL---TFSLRLMEEN 180
I R I + CR + V + I + E++ F + +
Sbjct: 2202 SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQVEEVQYGNFDVNISFYT 2261
Query: 181 -----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVD 235
+ R L ++QAEI S L LFVD CVA+P + S + ++
Sbjct: 2262 SSSFLYPVTSRPYYVDLNQDLYVQAEI-LHSDAVLTLFVDTCVASPYSNDFTSLTYDLIR 2320
Query: 236 FHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDE 295
GC+ D S+ P +F FHF N + +Y+ C + V A
Sbjct: 2321 -SGCVRDDTYGPYSS-----PSLRIARFRFRAFHFLNRFPS-VYLRCKMVVCRAYDPSSR 2373
Query: 296 LNKAC 300
+ C
Sbjct: 2374 CYRGC 2378
>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
[Homo sapiens]
Length = 1785
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 68 AADLTL----GPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPV 123
A+DL + G C P + T ++V F + CG Q +D + YS FL V
Sbjct: 1520 ASDLVISTWNGYYECRPQI---TPNLVIFTIPYSGCGTFKQADNDTIDYSNFL---TAAV 1573
Query: 124 GNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKL---TFSLRLMEEN 180
I R I + CR + V + I + E++ F + +
Sbjct: 1574 SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQVEEVQYGNFDVNISFYT 1633
Query: 181 -----WNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVD 235
+ R L ++QAEI S L LFVD CVA+P + S + ++
Sbjct: 1634 SSSFLYPVTSRPYYVDLNQDLYVQAEI-LHSDAVLTLFVDTCVASPYSNDFTSLTYDLIR 1692
Query: 236 FHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDE 295
GC+ D S+ P +F FHF N + +Y+ C + V A
Sbjct: 1693 -SGCVRDDTYGPYSS-----PSLRIARFRFRAFHFLNRFPS-VYLRCKMVVCRAYDPSSR 1745
Query: 296 LNKAC 300
+ C
Sbjct: 1746 CYRGC 1750
>gi|134268640 tectorin alpha precursor [Homo sapiens]
Length = 2155
Score = 41.6 bits (96), Expect = 0.001
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 28/275 (10%)
Query: 44 VECQEATLMVMVSK-DLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLHE--CG 100
V C+ A + V +SK LF G + + C ++ ED + F++ + CG
Sbjct: 1804 VTCKAAQMEVSISKCKLFQLG--FEREGVRINDRQC---TGIEGEDFISFQINNTKGNCG 1858
Query: 101 NSMQVTDDALVY-STFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAILPTWLP 159
N +Q ++Y +T + GN+ I R + C Y +S +++ L
Sbjct: 1859 NIVQSNGTHIMYKNTLWIESANNTGNI-ITRDRTINVEFSCAYELDIKISLDSVVKPMLS 1917
Query: 160 FRTTVFSEEKLTFSLRLMEENWNAEKRSP------TFHLGDAAHLQAEIHTGSHVPLRLF 213
++ +F ++ NA + P D ++ + L L
Sbjct: 1918 VINLTVPTQEGSFITKMALYK-NASYKHPYRQGEVVLTTRDVLYVGVFVVGADATHLILT 1976
Query: 214 VDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDTLQFTVDVFHFAND 273
++ C ATPT D N + I++ GC L D + + T +F V VF F D
Sbjct: 1977 LNKCYATPTRDSNDKLRYFIIE-GGC--QNLKDNTIGIE-ENAVSLTCRFHVTVFKFIGD 2032
Query: 274 SRNMIYITCHLKVTLAEQDPDELNKACSFSKPSNS 308
Y HL ++ D ++ +C + P NS
Sbjct: 2033 -----YDEVHLHCAVSLCDSEKY--SCKITCPHNS 2060
>gi|239756356 PREDICTED: similar to hCG1731366 [Homo sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.012
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 176 LMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLF 213
L+ E+WNA++ P F L D QA+ +T H PLRLF
Sbjct: 5 LVAEDWNAKQVPPAFWLRDILCFQAQTYTCCHKPLRLF 42
>gi|169209261 PREDICTED: similar to hCG1731366 [Homo sapiens]
Length = 456
Score = 38.5 bits (88), Expect = 0.012
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 176 LMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLF 213
L+ E+WNA++ P F L D QA+ +T H PLRLF
Sbjct: 5 LVAEDWNAKQVPPAFWLRDILCFQAQTYTCCHKPLRLF 42
>gi|239745242 PREDICTED: similar to COMM domain containing 4 [Homo
sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.012
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 176 LMEENWNAEKRSPTFHLGDAAHLQAEIHTGSHVPLRLF 213
L+ E+WNA++ P F L D QA+ +T H PLRLF
Sbjct: 5 LVAEDWNAKQVPPAFWLRDILCFQAQTYTCCHKPLRLF 42
>gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2
[Homo sapiens]
Length = 534
Score = 37.7 bits (86), Expect = 0.020
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFE--VG 95
S+QP L +C + V V K L G L L C ++ + + V V
Sbjct: 219 SLQPQL-DCGPREIKVKVDKCLLGGLGLGEEVIAYLRDPNCSSILQTEERNWVSVTSPVQ 277
Query: 96 LHECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAIL- 154
C N ++ +Y L + N I+R I +C YP VS QA L
Sbjct: 278 ASACRNILERNQTHAIYKNTL-----SLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 332
Query: 155 PTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTFHLGDAAHLQAE--------IHTGS 206
P +V + + L + ++ + GDA L E + G
Sbjct: 333 PIVSSLNVSVDGNGEFIVRMALFQ-----DQNYTNPYEGDAVELSVESVLYVGAILEQGD 387
Query: 207 HVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDT-LQFTV 265
L + +C ATPT D+ + I+ + C S V G + +F+V
Sbjct: 388 TSRFNLVLRNCYATPTEDKADLVKYFIIR-NSC----SNQRDSTIHVEENGQSSESRFSV 442
Query: 266 DVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
+F FA +++++ C + + D LN+ C
Sbjct: 443 QMFMFAG-HYDLVFLHCEIHLC------DSLNEQC 470
>gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1
[Homo sapiens]
Length = 537
Score = 37.7 bits (86), Expect = 0.020
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFE--VG 95
S+QP L +C + V V K L G L L C ++ + + V V
Sbjct: 222 SLQPQL-DCGPREIKVKVDKCLLGGLGLGEEVIAYLRDPNCSSILQTEERNWVSVTSPVQ 280
Query: 96 LHECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAIL- 154
C N ++ +Y L + N I+R I +C YP VS QA L
Sbjct: 281 ASACRNILERNQTHAIYKNTL-----SLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 335
Query: 155 PTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTFHLGDAAHLQAE--------IHTGS 206
P +V + + L + ++ + GDA L E + G
Sbjct: 336 PIVSSLNVSVDGNGEFIVRMALFQ-----DQNYTNPYEGDAVELSVESVLYVGAILEQGD 390
Query: 207 HVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDT-LQFTV 265
L + +C ATPT D+ + I+ + C S V G + +F+V
Sbjct: 391 TSRFNLVLRNCYATPTEDKADLVKYFIIR-NSC----SNQRDSTIHVEENGQSSESRFSV 445
Query: 266 DVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
+F FA +++++ C + + D LN+ C
Sbjct: 446 QMFMFAG-HYDLVFLHCEIHLC------DSLNEQC 473
>gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4
[Homo sapiens]
Length = 387
Score = 37.7 bits (86), Expect = 0.020
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFE--VG 95
S+QP L +C + V V K L G L L C ++ + + V V
Sbjct: 72 SLQPQL-DCGPREIKVKVDKCLLGGLGLGEEVIAYLRDPNCSSILQTEERNWVSVTSPVQ 130
Query: 96 LHECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAIL- 154
C N ++ +Y L + N I+R I +C YP VS QA L
Sbjct: 131 ASACRNILERNQTHAIYKNTL-----SLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 185
Query: 155 PTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTFHLGDAAHLQAE--------IHTGS 206
P +V + + L + ++ + GDA L E + G
Sbjct: 186 PIVSSLNVSVDGNGEFIVRMALFQ-----DQNYTNPYEGDAVELSVESVLYVGAILEQGD 240
Query: 207 HVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDT-LQFTV 265
L + +C ATPT D+ + I+ + C S V G + +F+V
Sbjct: 241 TSRFNLVLRNCYATPTEDKADLVKYFIIR-NSC----SNQRDSTIHVEENGQSSESRFSV 295
Query: 266 DVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
+F FA +++++ C + + D LN+ C
Sbjct: 296 QMFMFAG-HYDLVFLHCEIHLC------DSLNEQC 323
>gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3
[Homo sapiens]
Length = 390
Score = 37.7 bits (86), Expect = 0.020
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFE--VG 95
S+QP L +C + V V K L G L L C ++ + + V V
Sbjct: 75 SLQPQL-DCGPREIKVKVDKCLLGGLGLGEEVIAYLRDPNCSSILQTEERNWVSVTSPVQ 133
Query: 96 LHECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVRTNRAEIPIECRYPRQGNVSSQAIL- 154
C N ++ +Y L + N I+R I +C YP VS QA L
Sbjct: 134 ASACRNILERNQTHAIYKNTL-----SLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 188
Query: 155 PTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTFHLGDAAHLQAE--------IHTGS 206
P +V + + L + ++ + GDA L E + G
Sbjct: 189 PIVSSLNVSVDGNGEFIVRMALFQ-----DQNYTNPYEGDAVELSVESVLYVGAILEQGD 243
Query: 207 HVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSAFKVPRPGPDT-LQFTV 265
L + +C ATPT D+ + I+ + C S V G + +F+V
Sbjct: 244 TSRFNLVLRNCYATPTEDKADLVKYFIIR-NSC----SNQRDSTIHVEENGQSSESRFSV 298
Query: 266 DVFHFANDSRNMIYITCHLKVTLAEQDPDELNKAC 300
+F FA +++++ C + + D LN+ C
Sbjct: 299 QMFMFAG-HYDLVFLHCEIHLC------DSLNEQC 326
>gi|195976821 dysferlin isoform 2 [Homo sapiens]
Length = 2081
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 560 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 619
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 620 NYGNKFDMT 628
>gi|4503431 dysferlin isoform 8 [Homo sapiens]
Length = 2080
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 559 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 618
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 619 NYGNKFDMT 627
>gi|195976779 dysferlin isoform 1 [Homo sapiens]
Length = 2119
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 577 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 636
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 637 NYGNKFDMT 645
>gi|195976777 dysferlin isoform 3 [Homo sapiens]
Length = 2067
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 546 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 605
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 606 NYGNKFDMT 614
>gi|195976775 dysferlin isoform 4 [Homo sapiens]
Length = 2098
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 577 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 636
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 637 NYGNKFDMT 645
>gi|195976773 dysferlin isoform 5 [Homo sapiens]
Length = 2088
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 546 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 605
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 606 NYGNKFDMT 614
>gi|195976769 dysferlin isoform 6 [Homo sapiens]
Length = 2102
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 560 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 619
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 620 NYGNKFDMT 628
>gi|195976766 dysferlin isoform 7 [Homo sapiens]
Length = 2112
Score = 30.0 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 38 SVQPVLVECQEATLMVMVSKDLFGTGKLIRAADLTLGPEACEPLVSMDTEDVVRFEVGLH 97
S++ LVE E + + + D+ K +R +L + D +D ++FEV +
Sbjct: 591 SLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDAIQFEVSIG 650
Query: 98 ECGNSMQVT 106
GN +T
Sbjct: 651 NYGNKFDMT 659
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,808,593
Number of Sequences: 37866
Number of extensions: 837015
Number of successful extensions: 1818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1781
Number of HSP's gapped (non-prelim): 43
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.